Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPDEF

Gene Name Gene ID Reads Annotation
SPDEF ENSDARG00000029930 60 SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]










Genes with expression patterns similar to SPDEF

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SPDEF ENSDARG00000029930 60 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
2. syne2a 63 3.237 0.706 0.876 - - - 0.929 0.726 - - spectrin repeat containing, nuclear envelope 2a
3. gabrr2b ENSDARG00000014057 9 2.86 - 0.940 - - - 0.920 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
4. CR677591.1 CR677591.1 19 2.77 - 0.911 - - - 0.920 0.939 - -
5. si:dkey-7a20.9 si:dkey-7a20.9 154 2.472 - 0.817 - - - 0.803 0.852 - -
6. si:ch211-165d12.4 ENSDARG00000079353 330 2.436 - 0.818 - - - 0.802 0.816 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
7. traf3ip1 ENSDARG00000010300 69 2.362 - 0.702 - - - 0.866 0.794 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
8. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 2.358 - 0.921 - - - 0.733 0.704 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
9. socs8 socs8 128 2.355 - 0.780 - - - 0.738 0.837 - -
10. smad6b ENSDARG00000031763 12 1.94 - 0.940 - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
11. PLEKHS1_2 PLEKHS1_2 21 1.92 - - - - - 0.920 1.000 - -
12. zgc:152977 ENSDARG00000077178 59 1.914 - 0.914 - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
13. oprk1 ENSDARG00000006894 43 1.865 - - - - - 0.889 0.976 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
14. exoc4 ENSDARG00000004336 32 1.853 - 0.933 - - - 0.920 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
15. si:dkey-7e14.3 ENSDARG00000086055 50 1.804 - - - - - 0.852 0.952 - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
16. ATP13A5 ATP13A5 13 1.787 - - - 0.787 - - 1.000 - -
17. slc46a3 ENSDARG00000077313 14 1.785 - 0.940 - - - - 0.845 - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
18. tbx18 ENSDARG00000036930 390 1.781 - - - - - 0.823 0.958 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
19. zgc:198419 ENSDARG00000076221 156 1.77 - - - - 0.915 0.855 - - - zgc:198419 [Source:ZFIN;Acc:ZDB-GENE-030131-7540]
20. si:ch211-241e1.5 ENSDARG00000008906 70 1.764 - 0.911 - - 0.853 - - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
21. fopnl ENSDARG00000071198 1002 1.76 - 0.940 - - - 0.820 - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
22. grnas ENSDARG00000091885 71 1.737 - - - - 0.863 - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
23. CABZ01085657.1 CABZ01085657.1 23 1.737 - 0.817 - - - 0.920 - - -
24. XCR1_1 XCR1_1 187 1.736 0.866 - - - - 0.870 - - -
25. PPM1J ENSDARG00000074690 109 1.732 - 0.978 - - - - 0.754 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
26. ism2 ism2 153 1.71 - - - - - 0.841 0.869 - -
27. SDSL ENSDARG00000074698 34 1.698 - - - - - 0.920 0.778 - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
28. nalcn ENSDARG00000001835 294 1.697 - 0.889 - - 0.808 - - - - sodium leak channel, non-selective [Source:ZFIN;Acc:ZDB-GENE-050410-12]
29. CR391977.3 CR391977.3 76 1.691 - - - - - 0.752 0.939 - -
30. CR847504.1 ENSDARG00000102515 29 1.691 - - - - - - 0.958 - 0.733
31. CNNM2 CNNM2 225 1.685 0.798 - - - - 0.887 - - -
32. U2 U2 52 1.678 - 0.739 - - - - 0.939 - -
33. si:dkey-43f9.4 si:dkey-43f9.4 180 1.672 0.874 - - - - 0.798 - - -
34. CABZ01073654.1 CABZ01073654.1 16 1.664 0.748 - - - - - 0.916 - -
35. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 1.659 - 0.876 - - - - 0.783 - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
36. si:dkey-23a17.1 si:dkey-23a17.1 15 1.658 - 0.856 - - - 0.802 - - -
37. cyb5r2 ENSDARG00000051925 304 1.647 0.747 0.900 - - - - - - - cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
38. cyp46a1 cyp46a1 43 1.644 - 0.730 - - - - 0.914 - -
39. F7 ENSDARG00000034862 121 1.638 - 0.835 - - - - 0.803 - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
40. si:dkey-225k4.1 ENSDARG00000092045 47 1.628 - - - - - 0.893 - 0.735 - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
41. zgc:172049 zgc:172049 175 1.616 - - - - 0.739 0.877 - - -
42. zgc:174273 zgc:174273 374 1.608 - - - - 0.866 0.742 - - -
43. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.606 0.816 0.790 - - - - - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
44. trim24 ENSDARG00000103350 431 1.604 - 0.798 - - - 0.806 - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
45. kcnt1 ENSDARG00000079484 45 1.587 - - - 0.793 - - 0.794 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
46. si:ch211-92l17.1 ENSDARG00000094584 18 1.585 - 0.779 - - - - 0.806 - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
47. fancc ENSDARG00000055232, ENSDARG00000116499 50 1.574 - 0.826 - - - - - - 0.748 FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
48. fam155b ENSDARG00000060152, ENSDARG00000114398 221 1.566 - 0.754 - - - - 0.812 - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
49. dysf ENSDARG00000007370 125 1.558 - 0.837 - - - 0.721 - - - dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [Source:ZFIN;Acc:ZDB-GENE-070501-1]
50. camsap1b ENSDARG00000035122 492 1.551 - 0.807 - - - 0.744 - - - calmodulin regulated spectrin-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-070705-301]
51. si:rp71-80o10.4 ENSDARG00000094316 279 1.548 0.777 - - - - 0.771 - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
52. arhgap29b ENSDARG00000017748 812 1.528 0.741 0.787 - - - - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
53. CU469544.1 CU469544.1 219 1.516 - 0.758 - - - - 0.758 - -
54. ALPK1 195 1.515 - 0.778 - - - 0.737 - - - alpha-kinase 1
55. gpr39 ENSDARG00000102888 46 1.513 - 0.746 - - - 0.767 - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
56. h2afy ENSDARG00000099329 286 1.513 0.749 0.764 - - - - - - - H2A histone family, member Y [Source:ZFIN;Acc:ZDB-GENE-060421-4796]
57. si:ch73-95a24.1 si:ch73-95a24.1 11 1.503 - - 0.701 0.802 - - - - -
58. GIPR ENSDARG00000025478 87 1.493 - - - - - 0.743 0.750 - - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
59. si:ch211-76l23.6 si:ch211-76l23.6 68 1.488 - - - 0.787 - - 0.701 - -
60. kctd7 ENSDARG00000061580 44 1.474 - - - - - 0.714 0.760 - - potassium channel tetramerization domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060804-2]
61. slc25a18 ENSDARG00000070717 787 1.469 - - - - - 0.750 0.719 - - solute carrier family 25 (glutamate carrier), member 18 [Source:ZFIN;Acc:ZDB-GENE-041111-192]
62. C2H5orf22 C2H5orf22 196 1.427 - 0.707 - - - - 0.720 - -
63. SPAG9 ENSDARG00000078142 629 1.419 0.717 - - - - 0.702 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
64. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - - - - - 1.000 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
65. si:dkey-58f10.11 ENSDARG00000094935 1 1 - - - - - - 1.000 - - si:dkey-58f10.11 [Source:ZFIN;Acc:ZDB-GENE-060526-313]
66. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
67. CABZ01002626.1 CABZ01002626.1 29 1 - - - - - - 1.000 - -
68. CECR6 25 1 - - - - - - 1.000 - - cat eye syndrome chromosome region, candidate 6
69. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
70. CABZ01078515.1 CABZ01078515.1 25 1 - 1.000 - - - - - - -
71. SIKE1 2 1 - - - - - - 1.000 - - suppressor of IKBKE 1, transcript variant X3
72. nitr3a_1 ENSDARG00000110676 44 1 - - - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
73. CR762480.2 ENSDARG00000102728 1 1 - - - - - - 1.000 - -
74. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
75. sh2d1aa ENSDARG00000095348 4 1 - - - - - - 1.000 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
76. TMEM138 ENSDARG00000090543 105 1 - - - - - - 1.000 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
77. si:ch211-122l24.5 si:ch211-122l24.5 1 1 - - - - - - 1.000 - -
78. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
79. CU929052.1 CU929052.1 642 1 - - - - - - 1.000 - -
80. slc5a1 ENSDARG00000013871 4 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
81. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - - 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
82. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
83. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
84. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
85. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
86. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
87. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
88. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
89. si:dkey-41e15.4 si:dkey-41e15.4 1 1 - - - - - - 1.000 - -
90. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
91. MMP20 MMP20 1 1 - - - - - - 1.000 - -
92. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1 - - - - - - 1.000 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
93. mtus2 mtus2 22 1 - - - - - - 1.000 - -
94. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
95. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
96. FRMD7 ENSDARG00000068958 17 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
97. st6galnac ENSDARG00000086292 29 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
98. GRINA GRINA 12 1 - - - - - - 1.000 - -
99. si:dkey-261l7.2 ENSDARG00000094345 51 1 - - - - - - 1.000 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
100. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B

There are 1473 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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