Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNX2

Gene Name Gene ID Reads Annotation
SNX2 ENSDARG00000104128 1501 sorting nexin 2 [Source:ZFIN;Acc:ZDB-GENE-051120-45]










Genes with expression patterns similar to SNX2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SNX2 ENSDARG00000104128 1501 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 2 [Source:ZFIN;Acc:ZDB-GENE-051120-45]
2. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.658 0.850 - - - - 0.808 - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
3. tmem160 ENSDARG00000069649 587 1.644 0.881 - - - - - 0.763 - - transmembrane protein 160 [Source:ZFIN;Acc:ZDB-GENE-060503-851]
4. smarcd1 ENSDARG00000019004 6028 1.626 0.829 0.797 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
5. JMJD1C_1 JMJD1C_1 3094 1.618 0.836 - - - - - 0.782 - -
6. ppp4r2a ENSDARG00000026540 1782 1.578 0.847 - - - - - 0.731 - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
7. acot11b ENSDARG00000042122 235 1.555 0.831 - - - - 0.724 - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
8. C1H4orf27 C1H4orf27 1961 1.552 0.850 - - - - 0.702 - - -
9. ACVR1B ACVR1B 4824 1.551 0.758 - - - - 0.793 - - -
10. CABZ01013938.1 CABZ01013938.1 4497 1.534 0.745 0.789 - - - - - - -
11. wdfy1 ENSDARG00000005425 3628 1.527 0.810 0.717 - - - - - - - WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
12. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.527 0.827 - - - - - 0.700 - - ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
13. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 1.522 0.776 - - - - - 0.746 - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
14. cad ENSDARG00000041895 4977 1.494 - 0.780 - - - 0.714 - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
15. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.483 0.778 - - - - 0.705 - - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
16. sox4b ENSDARG00000098834 1634 1.476 - 0.723 - - - - 0.753 - - SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
17. IER2 IER2 604 1.471 0.739 - - - - 0.732 - - -
18. XCR1_1 XCR1_1 187 1.454 - 0.712 - - - - 0.742 - -
19. bnip3la ENSDARG00000025468 3097 1.441 0.716 - - - - 0.725 - - - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
20. fmo5 ENSDARG00000016357, ENSDARG00000116737 2267 1.416 0.701 - - - - 0.715 - - - flavin containing monooxygenase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6606]
21. gab1 ENSDARG00000037018 1489 0.92 0.920 - - - - - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
22. rsrc2 ENSDARG00000042534 1756 0.918 0.918 - - - - - - - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
23. dgcr6 ENSDARG00000005500 479 0.915 0.915 - - - - - - - - DiGeorge syndrome critical region gene 6 [Source:ZFIN;Acc:ZDB-GENE-040912-125]
24. dmgdh ENSDARG00000025703 6088 0.913 - 0.913 - - - - - - - dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
25. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 0.912 0.912 - - - - - - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
26. lrp1b lrp1b 3216 0.907 - 0.907 - - - - - - -
27. itgb1bp1 ENSDARG00000007169 2723 0.907 0.907 - - - - - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
28. mafba ENSDARG00000017121 1215 0.903 0.903 - - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
29. clpp ENSDARG00000020679 2125 0.901 0.901 - - - - - - - - caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
30. AL954697.2 AL954697.2 1809 0.898 0.898 - - - - - - - -
31. ZNF710 ZNF710 766 0.896 0.896 - - - - - - - -
32. kpnb3 ENSDARG00000040245 7967 0.894 0.894 - - - - - - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
33. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 0.894 - 0.894 - - - - - - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
34. nle1 ENSDARG00000057105 522 0.892 0.892 - - - - - - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
35. TMEM261 TMEM261 6529 0.892 0.892 - - - - - - - -
36. slc20a1b ENSDARG00000010641 2564 0.892 0.892 - - - - - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
37. CNOT4_1 CNOT4_1 697 0.892 0.892 - - - - - - - -
38. strada ENSDARG00000037929 1614 0.89 0.890 - - - - - - - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
39. kidins220a ENSDARG00000031240 3639 0.889 - 0.889 - - - - - - - kinase D-interacting substrate 220a [Source:ZFIN;Acc:ZDB-GENE-041014-170]
40. cmah ENSDARG00000057714 852 0.888 0.888 - - - - - - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
41. ADAMTS12 ENSDARG00000067549 477 0.888 0.888 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 12 [Source:ZFIN;Acc:ZDB-GENE-070705-471]
42. degs1 ENSDARG00000007347 2481 0.887 - 0.887 - - - - - - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
43. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 0.887 0.887 - - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
44. BX511263.1_1 BX511263.1_1 368 0.887 0.887 - - - - - - - -
45. si:ch211-214e3.5 ENSDARG00000074270 755 0.886 0.886 - - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
46. rspry1 ENSDARG00000062558 1424 0.886 0.886 - - - - - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
47. flot2a ENSDARG00000004830 5276 0.886 0.886 - - - - - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
48. kcnk5b ENSDARG00000012390 294 0.886 0.886 - - - - - - - - potassium channel, subfamily K, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1297]
49. ck2b ck2b 781 0.885 0.885 - - - - - - - -
50. uck2b ENSDARG00000022213 1542 0.885 0.885 - - - - - - - - uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
51. taf12 ENSDARG00000104030, ENSDARG00000115004 163 0.885 0.885 - - - - - - - - TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]
52. dlk2 ENSDARG00000076247 387 0.884 0.884 - - - - - - - - delta-like 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081107-4]
53. asb6 ENSDARG00000007125 389 0.884 0.884 - - - - - - - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
54. prkci ENSDARG00000021225 2472 0.884 0.884 - - - - - - - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
55. xpnpep1 ENSDARG00000029011 1723 0.883 0.883 - - - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
56. exd3 ENSDARG00000063140 119 0.883 0.883 - - - - - - - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
57. galnt10 ENSDARG00000103825 320 0.883 0.883 - - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
58. sft2d3 ENSDARG00000070284 351 0.882 0.882 - - - - - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
59. CABZ01111604.1 CABZ01111604.1 140 0.882 0.882 - - - - - - - -
60. pho ENSDARG00000035133 670 0.882 0.882 - - - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
61. fzd7b ENSDARG00000027589 2562 0.881 0.881 - - - - - - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
62. MRPL18 ENSDARG00000060199, ENSDARG00000110565, ENSDARG00000112114 1364 0.881 0.881 - - - - - - - - mitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]
63. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 0.881 0.881 - - - - - - - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
64. arfrp1 ENSDARG00000057857 2840 0.881 0.881 - - - - - - - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
65. TMEM151A ENSDARG00000077986 78 0.88 0.880 - - - - - - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
66. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 0.88 0.880 - - - - - - - - adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
67. TMTC2 TMTC2 478 0.88 0.880 - - - - - - - -
68. nuak2 ENSDARG00000063661 610 0.88 0.880 - - - - - - - - NUAK family, SNF1-like kinase, 2 [Source:ZFIN;Acc:ZDB-GENE-050208-563]
69. tvp23b ENSDARG00000057060 361 0.879 0.879 - - - - - - - - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
70. me3 ENSDARG00000002305 3305 0.879 0.879 - - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
71. exoc3l4 ENSDARG00000058180 923 0.879 0.879 - - - - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
72. zgc:85932 ENSDARG00000098239 373 0.879 0.879 - - - - - - - - zgc:85932 [Source:ZFIN;Acc:ZDB-GENE-040426-2460]
73. zgc:173726 ENSDARG00000077078 250 0.879 0.879 - - - - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
74. por por 1211 0.879 0.879 - - - - - - - -
75. gpr78 gpr78 135 0.878 0.878 - - - - - - - -
76. tmem180 tmem180 430 0.878 0.878 - - - - - - - -
77. acp6 ENSDARG00000040064 197 0.878 0.878 - - - - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
78. TMEM55B TMEM55B 76 0.878 0.878 - - - - - - - -
79. abi1b ENSDARG00000062991 1564 0.877 0.877 - - - - - - - - abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
80. dlgap4a ENSDARG00000060849 1813 0.877 0.877 - - - - - - - - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
81. tceb1a 969 0.876 0.876 - - - - - - - - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
82. nek1 ENSDARG00000022350 158 0.876 0.876 - - - - - - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
83. C8H9orf64 C8H9orf64 640 0.875 0.875 - - - - - - - -
84. stm ENSDARG00000035694 1567 0.875 0.875 - - - - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
85. rbm25 rbm25 3629 0.875 0.875 - - - - - - - -
86. rnf152 ENSDARG00000087782 141 0.874 0.874 - - - - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
87. brf1a ENSDARG00000017835 206 0.874 0.874 - - - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
88. CABZ01020207.1 CABZ01020207.1 145 0.873 0.873 - - - - - - - -
89. dyrk1b ENSDARG00000070187 2777 0.873 0.873 - - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
90. THEG ENSDARG00000078644 121 0.873 0.873 - - - - - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
91. entpd2a.2 ENSDARG00000033953 389 0.873 0.873 - - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
92. ppfibp2a ENSDARG00000061977 199 0.873 0.873 - - - - - - - - PTPRF interacting protein, binding protein 2a (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-070705-277]
93. si:ch211-209a2.1 250 0.872 0.872 - - - - - - - - si:ch211-209a2.1, transcript variant X2
94. lyst ENSDARG00000008575, ENSDARG00000113634 55 0.872 0.872 - - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
95. CU468896.2 CU468896.2 38 0.872 0.872 - - - - - - - -
96. zgc:101562 ENSDARG00000040179 90 0.872 0.872 - - - - - - - - zgc:101562 [Source:ZFIN;Acc:ZDB-GENE-041010-74]
97. plekhg7 ENSDARG00000062855 308 0.872 0.872 - - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
98. CR387996.1 ENSDARG00000097774 3037 0.871 0.871 - - - - - - - -
99. C17H14orf1 C17H14orf1 256 0.871 0.871 - - - - - - - -
100. BX539313.3 ENSDARG00000098016 638 0.871 0.871 - - - - - - - -

There are 693 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA