Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMIM4

Gene Name Gene ID Reads Annotation
SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]










Genes with expression patterns similar to SMIM4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]
2. rassf9 ENSDARG00000074721 448 2.493 - 0.781 - 0.854 - 0.858 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
3. nrg1 ENSDARG00000104314 1081 1.682 - - - 0.785 - 0.897 - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
4. vta1 ENSDARG00000013732 6072 1.645 - 0.820 - - - 0.825 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
5. dvl2 ENSDARG00000056184 1525 1.631 - 0.774 - - - 0.857 - - - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
6. mapk13 ENSDARG00000058470 1001 1.617 - - - 0.776 - 0.841 - - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
7. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.601 - - - 0.754 - 0.847 - - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
8. atl3 ENSDARG00000004270 2806 1.582 - - - 0.739 - 0.843 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
9. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.581 - - - 0.704 - 0.877 - - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
10. guk1a ENSDARG00000030340 517 1.58 - - - 0.792 - 0.788 - - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
11. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.574 - - - 0.722 - 0.852 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
12. hiat1a ENSDARG00000013117 607 1.572 - - - 0.731 - 0.841 - - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
13. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.565 - - - - - 0.863 0.702 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
14. tns1 tns1 5891 1.561 - - - - - 0.821 0.740 - -
15. sema4e ENSDARG00000052997 607 1.541 - 0.797 - 0.744 - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
16. slc25a5 ENSDARG00000092553 626 1.535 - - - 0.724 - - 0.811 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
17. CHCHD3 CHCHD3 1425 1.533 - - - 0.785 - - 0.748 - -
18. sptssa ENSDARG00000071203 2306 1.512 - - - 0.706 - 0.806 - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
19. mrpl37 ENSDARG00000062916 1600 1.495 - 0.741 - - - - 0.754 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
20. blvra ENSDARG00000059857 270 1.494 - 0.712 - 0.782 - - - - - biliverdin reductase A [Source:ZFIN;Acc:ZDB-GENE-060929-312]
21. ppp1r13bb ENSDARG00000009142 1175 1.494 - 0.726 - - - 0.768 - - - protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]
22. ptrhd1 ENSDARG00000016122 2705 1.493 - - - - - 0.787 0.706 - - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
23. ttk ENSDARG00000041361 3911 1.481 - 0.741 - - - 0.740 - - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
24. ptp4a3 ENSDARG00000039997 1964 1.471 - - - 0.712 - 0.759 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
25. eif2s1a ENSDARG00000005827 5992 1.47 - 0.752 - - - 0.718 - - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
26. slc7a6os ENSDARG00000010596 1599 1.468 - - - 0.767 - - 0.701 - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
27. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.466 - - - - - 0.756 0.710 - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
28. apol1 ENSDARG00000007425, ENSDARG00000110882 1161 1.464 - 0.708 - - - 0.756 - - - apolipoprotein L, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3217]
29. MUSTN1 MUSTN1 1882 1.462 - - - 0.723 - - 0.739 - -
30. bckdk ENSDARG00000016904 3775 1.432 - 0.726 - - - 0.706 - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
31. ap1s1 ENSDARG00000056803 3854 1.432 0.709 0.723 - - - - - - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
32. EML4_1 EML4_1 8736 1.417 - 0.715 - - - 0.702 - - -
33. SEMA6B_1 SEMA6B_1 430 1.412 - 0.701 - 0.711 - - - - -
34. adhfe1 ENSDARG00000053518 499 0.961 - - - - - 0.961 - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
35. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.951 - - - - - 0.951 - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
36. rabac1 ENSDARG00000004171 2708 0.948 - - - - - 0.948 - - - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
37. pex13 ENSDARG00000071037 738 0.944 - - - - - 0.944 - - - peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
38. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.941 - - - - - 0.941 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
39. mgst1 mgst1 2820 0.937 - - - - - 0.937 - - -
40. dchs1b ENSDARG00000079850 831 0.934 - - - - - 0.934 - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
41. FYCO1 FYCO1 194 0.933 - - - - - 0.933 - - -
42. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 0.933 - - - - - 0.933 - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
43. im:7154842 im:7154842 434 0.931 - - - - - 0.931 - - -
44. kmt2e ENSDARG00000007523 1851 0.931 - - - - - 0.931 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
45. rprd2a ENSDARG00000058089 743 0.929 - - - - - 0.929 - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
46. CABZ01112358.1 CABZ01112358.1 667 0.929 - - - - - 0.929 - - -
47. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.929 - - - - - 0.929 - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
48. samd11 ENSDARG00000077852 631 0.928 - - - - - 0.928 - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
49. ccnt2a ENSDARG00000036685 168 0.928 - - - - - 0.928 - - - cyclin T2a [Source:ZFIN;Acc:ZDB-GENE-030131-5779]
50. si:dkey-117n7.5 ENSDARG00000089640 452 0.927 - - - - - 0.927 - - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
51. rabep2 ENSDARG00000061213 465 0.927 - - - - - 0.927 - - - rabaptin, RAB GTPase binding effector protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-572]
52. CACHD1 ENSDARG00000061590 1287 0.927 - - - - - 0.927 - - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
53. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 0.926 - - - - - 0.926 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
54. si:dkey-240e12.6 ENSDARG00000110137 674 0.926 - - - - - 0.926 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
55. si:zfos-364h11.1 99 0.924 - - - - - 0.924 - - - si:zfos-364h11.1, transcript variant X4
56. stra13 598 0.924 - - - - - 0.924 - - - stimulated by retinoic acid 13 homolog (mouse)
57. cldnb ENSDARG00000009544 6036 0.922 - - - - - 0.922 - - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
58. zgc:101569 ENSDARG00000038876 1525 0.922 - - - - - 0.922 - - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
59. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.921 - - - - - 0.921 - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
60. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 0.921 - - - - - 0.921 - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
61. tpk1 ENSDARG00000038040, ENSDARG00000114161 334 0.92 - - - - - 0.920 - - - thiamin pyrophosphokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-176]
62. slc12a9 ENSDARG00000060366 293 0.92 - - - - - 0.920 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
63. rwdd ENSDARG00000068256 964 0.917 - - - - - 0.917 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
64. nr1d2b ENSDARG00000009594 1144 0.917 - - - - - 0.917 - - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
65. mif ENSDARG00000071336 1328 0.916 - - - - - 0.916 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
66. MSL1 MSL1 223 0.916 - - - - - 0.916 - - -
67. sema6d ENSDARG00000002748 133 0.916 - - - - - 0.916 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
68. GCNT7 ENSDARG00000040608 91 0.915 - - - - - 0.915 - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
69. ik ENSDARG00000004161 3132 0.915 - - - - - 0.915 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
70. CABZ01005777.1 CABZ01005777.1 505 0.915 - - - - - 0.915 - - -
71. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.915 - - - - - 0.915 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
72. bcar1 ENSDARG00000056525 6563 0.915 - - - - - 0.915 - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
73. MYOF ENSDARG00000006112 436 0.915 - - - - - 0.915 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
74. acn9 acn9 520 0.915 - - - - - 0.915 - - -
75. SLC22A15 ENSDARG00000055445 111 0.914 - - - - - 0.914 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
76. RECQL4 ENSDARG00000077516 462 0.914 - - - - - 0.914 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
77. FP103059.1 FP103059.1 750 0.913 - - - - - 0.913 - - -
78. rdh8b ENSDARG00000105060 183 0.913 - - - - - 0.913 - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
79. nus1 ENSDARG00000027813 1417 0.912 - - - - - 0.912 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
80. dscc1 ENSDARG00000019907 720 0.912 - - - - - 0.912 - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
81. znf750 ENSDARG00000102267 327 0.911 - - - - - 0.911 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
82. BX649282.1 ENSDARG00000105704 347 0.911 - - - - - 0.911 - - -
83. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.911 - - - - - 0.911 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
84. slco2a1 ENSDARG00000061896 58 0.91 - - - - - 0.910 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
85. CU929417.2 CU929417.2 94 0.909 - - - - - 0.909 - - -
86. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.909 - - - - - 0.909 - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
87. ngly1 ENSDARG00000003205 733 0.908 - - - - - 0.908 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
88. ccdc25 ENSDARG00000021753 3837 0.908 - - - - - 0.908 - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
89. ccdc173 ENSDARG00000077928 260 0.908 - - - - - 0.908 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
90. krt1-19d ENSDARG00000023082 902 0.908 - - - - - 0.908 - - - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
91. zmym4 ENSDARG00000035823 347 0.907 - - - - - 0.907 - - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]
92. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.907 - - - - - 0.907 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
93. tmem53 ENSDARG00000038789 411 0.907 - - - - - 0.907 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
94. ppil1 ENSDARG00000015422 1353 0.907 - - - - - 0.907 - - - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:ZFIN;Acc:ZDB-GENE-051009-1]
95. dre-mir-429b ENSDARG00000082968 212 0.907 - - - - - 0.907 - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
96. THEM6_1 ENSDARG00000103914 469 0.907 - - - - - 0.907 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
97. TESK1_1 TESK1_1 276 0.906 - - - - - 0.906 - - -
98. smurf2 ENSDARG00000038067 2057 0.906 - - - - - 0.906 - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
99. SEC24B ENSDARG00000071906 1018 0.906 - - - - - 0.906 - - - SEC24 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6565]
100. CR759791.3 CR759791.3 134 0.906 - - - - - 0.906 - - -

There are 1168 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA