Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMCHD1

Gene Name Gene ID Reads Annotation
SMCHD1 ENSDARG00000104374 2 structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]










Genes with expression patterns similar to SMCHD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMCHD1 ENSDARG00000104374 2 3 1.000 - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
2. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
3. SNORA42 SNORA42 24 1.922 0.922 - - - 1.000 - - - -
4. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
5. SNORA62 SNORA62 39 1.844 1.000 - - - 0.844 - - - -
6. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
7. CACNA1H CACNA1H 34 1.678 0.923 - - - 0.755 - - - -
8. mapkap1 ENSDARG00000091777 8 1.574 0.752 - - - 0.822 - - - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
9. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
10. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
11. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 1.000 - - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
12. CU896555.1 CU896555.1 27 1 1.000 - - - - - - - -
13. si:ch211-255g12.8 ENSDARG00000069627 22 1 1.000 - - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
14. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
15. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
16. slc25a15a ENSDARG00000063539 50 1 - - 1.000 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
17. TMEM241 ENSDARG00000090685 11 1 - - 1.000 - - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
18. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
19. si:dkey-202i12.5 si:dkey-202i12.5 20 1 1.000 - - - - - - - -
20. si:ch73-290k24.5 ENSDARG00000076310 39 1 1.000 - - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
21. glrba ENSDARG00000052782, ENSDARG00000117018 4 1 1.000 - - - - - - - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
22. prkacbb_1 ENSDARG00000059125 83 1 1.000 - - - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
23. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
24. si:ch211-227p7.5 ENSDARG00000099046 1 1 1.000 - - - - - - - - si:ch211-227p7.5 [Source:ZFIN;Acc:ZDB-GENE-120703-10]
25. ZNF70 ZNF70 2 1 - - 1.000 - - - - - -
26. si:ch211-106g4.2 si:ch211-106g4.2 6 1 1.000 - - - - - - - -
27. card9 ENSDARG00000067672 33 1 1.000 - - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
28. CU638737.1 CU638737.1 17 1 1.000 - - - - - - - -
29. SBK3_1 SBK3_1 21 1 1.000 - - - - - - - -
30. FBXO16 ENSDARG00000033949 10 1 - - 1.000 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
31. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - 1.000 - - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
32. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
33. NXPH4 11 1 1.000 - - - - - - - - neurexophilin 4
34. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
35. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
36. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
37. dock1 ENSDARG00000099093 10 1 1.000 - - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
38. tenc1a tenc1a 3 1 - - 1.000 - - - - - -
39. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
40. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
41. btk ENSDARG00000004433 106 1 1.000 - - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
42. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
43. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - 1.000 - - - - - -
44. si:dkey-256e7.8 ENSDARG00000092022 4 1 1.000 - - - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
45. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
46. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
47. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
48. ENSDARG00000091766 ENSDARG00000091766 15 1 1.000 - - - - - - - -
49. myo7bb ENSDARG00000077201 7 1 - - 1.000 - - - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
50. SLC28A2 SLC28A2 21 1 1.000 - - - - - - - -
51. si:dkey-153k10.6 10 1 - - 1.000 - - - - - - si:dkey-153k10.6, transcript variant X1
52. dennd6aa ENSDARG00000030239 1 1 - - 1.000 - - - - - - DENN/MADD domain containing 6Aa [Source:ZFIN;Acc:ZDB-GENE-041010-63]
53. HIST1H2BA_1 ENSDARG00000116654 37 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
54. spata7 ENSDARG00000075898 16 1 - - 1.000 - - - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
55. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
56. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
57. CABZ01078849.1 CABZ01078849.1 0 1 - - 1.000 - - - - - -
58. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
59. si:ch211-15j21.2 si:ch211-15j21.2 13 1 - - 1.000 - - - - - -
60. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
61. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
62. CABZ01069012.1 CABZ01069012.1 0 1 - - 1.000 - - - - - -
63. per1a ENSDARG00000056885 0 1 - - 1.000 - - - - - - period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1]
64. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
65. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
66. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - 1.000 - - - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
67. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
68. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
69. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
70. MOB2 MOB2 4 1 - - - - 1.000 - - - -
71. CR749741.2 CR749741.2 15 1 1.000 - - - - - - - -
72. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
73. si:dkey-100h21.2 si:dkey-100h21.2 30 1 1.000 - - - - - - - -
74. snrnp35 ENSDARG00000099913 21 1 1.000 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
75. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
76. SFT2D2_1 SFT2D2_1 219 1 1.000 - - - - - - - -
77. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
78. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
79. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
80. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
81. FP236851.1 FP236851.1 10 1 1.000 - - - - - - - -
82. or137-1 ENSDARG00000105789 2 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
83. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
84. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
85. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
86. zgc:165627 zgc:165627 4 1 1.000 - - - - - - - -
87. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
88. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
89. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
90. CABZ01048021.1 CABZ01048021.1 15 1 1.000 - - - - - - - -
91. F13A1 F13A1 1 1 - - - - 1.000 - - - -
92. socs1a ENSDARG00000038095 20 1 - - 1.000 - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
93. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
94. si:ch211-223f7.1 si:ch211-223f7.1 38 1 1.000 - - - - - - - -
95. si:dkey-253d23.1 si:dkey-253d23.1 2 1 1.000 - - - - - - - -
96. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
97. ern2 ENSDARG00000058475 0 1 - - 1.000 - - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:ZFIN;Acc:ZDB-GENE-090312-15]
98. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
99. adamts18 ENSDARG00000001999 5 1 - - 1.000 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:ZFIN;Acc:ZDB-GENE-070815-1]
100. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -

There are 578 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA