Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMAD4_1

Gene Name Gene ID Reads Annotation
SMAD4_1 SMAD4_1 377










Genes with expression patterns similar to SMAD4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMAD4_1 SMAD4_1 377 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. usp45 ENSDARG00000075013 227 1.693 0.833 0.860 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
3. si:dkey-228i19.34 si:dkey-228i19.34 43 1.688 0.828 0.860 - - - - - - -
4. si:ch73-299h12.3 ENSDARG00000101790 590 1.681 0.836 - - - - - 0.845 - - si:ch73-299h12.3 [Source:ZFIN;Acc:ZDB-GENE-081031-93]
5. zgc:165582 ENSDARG00000074362 198 1.616 0.812 0.804 - - - - - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
6. hmox2a ENSDARG00000055101, ENSDARG00000114695 815 1.608 0.733 0.875 - - - - - - - heme oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-040914-13]
7. lrrk2 ENSDARG00000006169 82 1.572 0.725 - - - - - 0.847 - - leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]
8. ENSDARG00000074422 ENSDARG00000074422 61 1.555 0.807 - - - - - 0.748 - -
9. ttpa ENSDARG00000027584 640 1.542 - 0.831 - - - 0.711 - - - tocopherol (alpha) transfer protein [Source:ZFIN;Acc:ZDB-GENE-030131-4631]
10. si:ch1073-291c23.2 ENSDARG00000074869 585 1.511 0.702 - - - - - 0.809 - - si:ch1073-291c23.2 [Source:ZFIN;Acc:ZDB-GENE-081107-2]
11. BX539313.1 ENSDARG00000097396 1277 0.966 - 0.966 - - - - - - -
12. armc1 ENSDARG00000013861 175 0.942 - 0.942 - - - - - - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
13. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.94 - 0.940 - - - - - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
14. ctdnep1b ENSDARG00000035781 65 0.934 - 0.934 - - - - - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
15. arhgef16 ENSDARG00000077114 759 0.934 - 0.934 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
16. trpm4 trpm4 501 0.93 - 0.930 - - - - - - -
17. caspb ENSDARG00000052039 4329 0.93 - 0.930 - - - - - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
18. rgs19 ENSDARG00000077385 783 0.929 - 0.929 - - - - - - - regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
19. prkra ENSDARG00000076718 606 0.927 - 0.927 - - - - - - - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
20. si:ch211-209a2.1 250 0.927 - - - - - - 0.927 - - si:ch211-209a2.1, transcript variant X2
21. C9H2orf49 C9H2orf49 258 0.923 0.923 - - - - - - - -
22. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 0.922 - 0.922 - - - - - - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
23. amdhd2 ENSDARG00000100376 656 0.922 - 0.922 - - - - - - - amidohydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1871]
24. tbcelb ENSDARG00000019525 299 0.919 - 0.919 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
25. GEMIN7 ENSDARG00000041011 529 0.916 - 0.916 - - - - - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
26. si:ch211-89o5.1 si:ch211-89o5.1 91 0.916 - 0.916 - - - - - - -
27. fancd2 ENSDARG00000053574 247 0.913 - 0.913 - - - - - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
28. HIP1R HIP1R 490 0.912 - 0.912 - - - - - - -
29. tmem8a ENSDARG00000032795 677 0.912 - 0.912 - - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
30. zcchc11 32 0.907 0.907 - - - - - - - - zinc finger, CCHC domain containing 11, transcript variant X2
31. trmt1l ENSDARG00000042057 466 0.907 - 0.907 - - - - - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
32. ube2j2 ENSDARG00000061161 844 0.905 - 0.905 - - - - - - - ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
33. fbxo42 ENSDARG00000087545 262 0.904 - 0.904 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
34. CABZ01085888.1 CABZ01085888.1 868 0.904 - 0.904 - - - - - - -
35. DEF6 DEF6 19 0.903 0.903 - - - - - - - -
36. si:dkey-277m11.2 ENSDARG00000094879 15 0.903 0.903 - - - - - - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
37. PPP1R21 ENSDARG00000103144 385 0.903 0.903 - - - - - - - - protein phosphatase 1, regulatory subunit 21 [Source:ZFIN;Acc:ZDB-GENE-041114-8]
38. rnls ENSDARG00000012453 338 0.901 - 0.901 - - - - - - - renalase, FAD-dependent amine oxidase [Source:ZFIN;Acc:ZDB-GENE-040718-351]
39. rnf34a ENSDARG00000038300 179 0.899 - 0.899 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
40. wdr37 ENSDARG00000074611 468 0.899 - 0.899 - - - - - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
41. dirc2 ENSDARG00000009783 484 0.899 - 0.899 - - - - - - - disrupted in renal carcinoma 2 [Source:ZFIN;Acc:ZDB-GENE-040912-167]
42. BX000999.4_1 BX000999.4_1 222 0.898 - 0.898 - - - - - - -
43. afap1 ENSDARG00000055284 730 0.897 - 0.897 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
44. arap3 ENSDARG00000076801 725 0.893 - - - - - - 0.893 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
45. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 0.893 - 0.893 - - - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
46. si:dkey-229b18.3 ENSDARG00000095912 568 0.893 - 0.893 - - - - - - - si:dkey-229b18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6870]
47. fam63b 484 0.892 - 0.892 - - - - - - - family with sequence similarity 63, member B
48. exoc3l4 ENSDARG00000058180 923 0.891 - 0.891 - - - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
49. tex261 ENSDARG00000044584 513 0.89 - 0.890 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
50. crfb16 ENSDARG00000075181 40 0.89 0.890 - - - - - - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
51. si:dkey-261j4.3 ENSDARG00000035151 156 0.889 - - - - - - 0.889 - - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
52. sh3pxd2aa ENSDARG00000060148 913 0.889 - 0.889 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
53. ttc7b ENSDARG00000061207 710 0.888 - 0.888 - - - - - - - tetratricopeptide repeat domain 7B [Source:ZFIN;Acc:ZDB-GENE-070105-3]
54. C3H17orf103 C3H17orf103 973 0.888 - 0.888 - - - - - - -
55. btbd6a ENSDARG00000076440 748 0.888 - 0.888 - - - - - - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
56. traf4b ENSDARG00000038964 346 0.888 0.888 - - - - - - - - tnf receptor-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-040305-2]
57. kcnk13a ENSDARG00000008212 136 0.887 - 0.887 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
58. CR376783.1 ENSDARG00000074235 259 0.887 - 0.887 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
59. eomesa ENSDARG00000006640 257 0.887 0.887 - - - - - - - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
60. kcnj1a.4 ENSDARG00000090635 356 0.886 - 0.886 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
61. nucb2b ENSDARG00000036291 911 0.885 0.885 - - - - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
62. unc93a ENSDARG00000041554 427 0.884 - 0.884 - - - - - - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
63. birc5a ENSDARG00000075621 2256 0.884 - 0.884 - - - - - - - baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
64. sox18 ENSDARG00000058598 678 0.883 - - - - - - 0.883 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
65. NCOA7 NCOA7 658 0.883 - - - - - - 0.883 - -
66. C13H10orf32 C13H10orf32 465 0.882 - 0.882 - - - - - - -
67. si:ch73-18b11.2 ENSDARG00000094978 148 0.881 - 0.881 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
68. ms4a17a.9 ENSDARG00000094854 933 0.881 - 0.881 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
69. CABZ01003826.1_1 CABZ01003826.1_1 1154 0.881 - 0.881 - - - - - - -
70. mfsd11 ENSDARG00000102828 1043 0.881 - 0.881 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
71. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.88 - 0.880 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
72. fam105bb fam105bb 1253 0.88 - 0.880 - - - - - - -
73. UBASH3B UBASH3B 292 0.878 - 0.878 - - - - - - -
74. ISCA2 ENSDARG00000038154 489 0.878 - 0.878 - - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
75. zgc:109744 ENSDARG00000070800 262 0.877 - 0.877 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
76. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.877 - 0.877 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
77. wu:fu71h07 ENSDARG00000103860 558 0.875 - 0.875 - - - - - - - wu:fu71h07 [Source:ZFIN;Acc:ZDB-GENE-050302-121]
78. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.875 - 0.875 - - - - - - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
79. lpar2b ENSDARG00000042561 1086 0.875 0.875 - - - - - - - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
80. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.874 - 0.874 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
81. foxn4 ENSDARG00000010591 2332 0.873 - 0.873 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
82. tgfbr2 tgfbr2 1117 0.873 - 0.873 - - - - - - -
83. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.872 - 0.872 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
84. ptbp2a ENSDARG00000101947 1921 0.871 - 0.871 - - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
85. EDEM3 ENSDARG00000074129 805 0.871 - 0.871 - - - - - - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
86. fkbp7 ENSDARG00000010962 2986 0.871 - 0.871 - - - - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
87. CR388047.3 ENSDARG00000117023 89 0.87 - 0.870 - - - - - - -
88. rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 0.87 - 0.870 - - - - - - - regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]
89. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.87 - 0.870 - - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
90. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.869 - 0.869 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
91. wdr91 ENSDARG00000015153 388 0.869 - 0.869 - - - - - - - WD repeat domain 91 [Source:ZFIN;Acc:ZDB-GENE-050113-2]
92. RELL1 ENSDARG00000018312 579 0.869 - 0.869 - - - - - - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
93. CABZ01112521.1 CABZ01112521.1 83 0.868 0.868 - - - - - - - -
94. BX936443.2 BX936443.2 28 0.868 0.868 - - - - - - - -
95. alg9 ENSDARG00000012840 631 0.868 - 0.868 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
96. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.867 - 0.867 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
97. si:ch1073-155h21.1 ENSDARG00000007582 137 0.866 - 0.866 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
98. SEC16B ENSDARG00000099554 411 0.865 - 0.865 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
99. rab33ba ENSDARG00000052290 914 0.864 - 0.864 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
100. TEAD1 TEAD1 43 0.864 - 0.864 - - - - - - -

There are 865 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA