Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SHISA9

Gene Name Gene ID Reads Annotation
SHISA9 SHISA9 154










Genes with expression patterns similar to SHISA9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SHISA9 SHISA9 154 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. mctp2a ENSDARG00000001414 307 1.84 - 0.856 - 0.984 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
3. acp6 ENSDARG00000040064 197 1.81 - 0.828 - 0.982 - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
4. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.768 - 0.841 - 0.927 - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
5. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.728 - - - 0.984 - - 0.744 - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
6. ube2z ENSDARG00000029215 1059 1.724 0.782 - - 0.942 - - - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
7. hcfc2 ENSDARG00000058127 490 1.717 - 0.889 - 0.828 - - - - - host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
8. ZCCHC2 ENSDARG00000067950 204 1.707 - 0.718 - 0.989 - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
9. AKAP13_1 ENSDARG00000079994 444 1.697 0.742 - - 0.955 - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
10. CT574587.1 ENSDARG00000097915 383 1.683 0.741 - - 0.942 - - - - -
11. zdhhc6 ENSDARG00000075721 1494 1.68 0.728 - - 0.952 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
12. vps26b ENSDARG00000015823, ENSDARG00000116682 1023 1.678 - - - 0.952 - 0.726 - - - VPS26, retromer complex component B [Source:ZFIN;Acc:ZDB-GENE-040426-2699]
13. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 1.65 - - - 0.935 - - 0.715 - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
14. si:ch211-51h9.7 ENSDARG00000074720 227 1.638 0.744 - - 0.894 - - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
15. RBM26 ENSDARG00000104130 1012 1.611 - 0.702 - 0.909 - - - - - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
16. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.571 - 0.732 - 0.839 - - - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
17. CNOT4_1 CNOT4_1 697 1.538 - 0.765 - - - - 0.773 - -
18. fbxo8 ENSDARG00000007477 603 1.516 - 0.791 - - - - 0.725 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
19. gmeb1 ENSDARG00000062060 456 1.508 0.775 - - - - - 0.733 - - glucocorticoid modulatory element binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-35]
20. si:dkeyp-38g8.5 ENSDARG00000056954 506 1.505 - 0.709 - - - - 0.796 - - si:dkeyp-38g8.5 [Source:ZFIN;Acc:ZDB-GENE-081104-62]
21. AL929007.2 AL929007.2 117 1.497 0.724 - - - - 0.773 - - -
22. nktr ENSDARG00000059097 1998 1.489 - - - 0.706 - - 0.783 - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
23. ube3d ENSDARG00000026178 244 1.488 - 0.766 - - - - 0.722 - - ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
24. mast4 1164 1.479 - 0.769 - 0.710 - - - - - microtubule associated serine/threonine kinase family member 4, transcript variant X6
25. cep85l ENSDARG00000020777 1121 1.476 - 0.765 - 0.711 - - - - - centrosomal protein 85, like [Source:ZFIN;Acc:ZDB-GENE-041014-309]
26. lrrc40 ENSDARG00000017708 1156 1.448 - - - - - 0.721 0.727 - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
27. dpf2 ENSDARG00000012219 666 0.99 - - - 0.990 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
28. ptk6b ENSDARG00000059956 44 0.99 - - - 0.990 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
29. ulk3 ENSDARG00000101661 69 0.989 - - - 0.989 - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
30. TTC17 ENSDARG00000044812 124 0.989 - - - 0.989 - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
31. CU639413.2 CU639413.2 33 0.989 - - - 0.989 - - - - -
32. nr4a2b ENSDARG00000044532 103 0.989 - - - 0.989 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
33. tuba7l ENSDARG00000104643 33 0.989 - - - 0.989 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
34. gnav1 ENSDARG00000043006 305 0.989 - - - 0.989 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
35. SYNGAP1_1 SYNGAP1_1 66 0.989 - - - 0.989 - - - - -
36. ppfia2 ENSDARG00000013000 45 0.989 - - - 0.989 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
37. si:dkey-100n10.2 101 0.988 - - - 0.988 - - - - - si:dkey-100n10.2
38. HTRA4 ENSDARG00000005943 77 0.988 - - - 0.988 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
39. wasb ENSDARG00000026350 139 0.988 - - - 0.988 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
40. slc3a1 ENSDARG00000017165 136 0.988 - - - 0.988 - - - - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
41. TP53BP2 TP53BP2 217 0.987 - - - 0.987 - - - - -
42. ADCY3 ADCY3 537 0.987 - - - 0.987 - - - - -
43. tmem104 ENSDARG00000088560 859 0.987 - - - 0.987 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
44. rxrba ENSDARG00000078954 85 0.987 - - - 0.987 - - - - - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
45. cep76 ENSDARG00000058319 143 0.987 - - - 0.987 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
46. aanat2 ENSDARG00000079802 175 0.986 - - - 0.986 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
47. si:dkey-283b15.3 si:dkey-283b15.3 81 0.986 - - - 0.986 - - - - -
48. spns2 ENSDARG00000061017, ENSDARG00000114768 301 0.986 - - - 0.986 - - - - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
49. si:ch1073-127d16.1 ENSDARG00000087674 105 0.985 - - - 0.985 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
50. eef1a1a ENSDARG00000039502 234 0.985 - - - 0.985 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
51. CABZ01029822.1 ENSDARG00000086931 1654 0.985 - - - 0.985 - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
52. zgc:165525 zgc:165525 207 0.985 - - - 0.985 - - - - -
53. PARP12 PARP12 77 0.984 - - - 0.984 - - - - -
54. JMJD1C JMJD1C 289 0.984 - - - 0.984 - - - - -
55. gng2_1 ENSDARG00000056831 113 0.984 - - - 0.984 - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
56. trmt2b ENSDARG00000033967 127 0.984 - - - 0.984 - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
57. pomcb ENSDARG00000069307 72 0.984 - - - 0.984 - - - - - proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
58. zgc:165515 ENSDARG00000116300 182 0.984 - - - 0.984 - - - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
59. si:dkeyp-20e4.3 si:dkeyp-20e4.3 68 0.983 - - - 0.983 - - - - -
60. rs1 rs1 70 0.983 - - - 0.983 - - - - -
61. BX000999.4_1 BX000999.4_1 222 0.983 - - - 0.983 - - - - -
62. GPR180 73 0.983 - - - 0.983 - - - - - G protein-coupled receptor 180, transcript variant X2
63. scube3 ENSDARG00000011490 227 0.982 - - - 0.982 - - - - - signal peptide, CUB domain, EGF-like 3 [Source:ZFIN;Acc:ZDB-GENE-060717-1]
64. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 0.981 - - - 0.981 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
65. ftr65 202 0.981 - - - 0.981 - - - - - finTRIM family, member 65
66. galnt14 ENSDARG00000023448 102 0.981 - - - 0.981 - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
67. si:ch211-59m15.1 87 0.981 - - - 0.981 - - - - - si:ch211-59m15.1
68. DIP2C DIP2C 222 0.981 - - - 0.981 - - - - -
69. CU683901.1 CU683901.1 187 0.981 - - - 0.981 - - - - -
70. rexo1 ENSDARG00000026986 770 0.98 - - - 0.980 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
71. syt3 ENSDARG00000075830 430 0.979 - - - 0.979 - - - - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
72. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.979 - - - 0.979 - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
73. TTF1_5 TTF1_5 705 0.979 - - - 0.979 - - - - -
74. znf710a ENSDARG00000014680 582 0.978 - - - 0.978 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
75. slc6a14 ENSDARG00000029866 61 0.978 - - - 0.978 - - - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
76. tdrd3 ENSDARG00000025421 633 0.978 - - - 0.978 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
77. DTX3 DTX3 303 0.978 - - - 0.978 - - - - -
78. far1 ENSDARG00000006899 204 0.977 - - - 0.977 - - - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
79. CDKN1C CDKN1C 667 0.977 - - - 0.977 - - - - -
80. tuba4l ENSDARG00000074289 101 0.977 - - - 0.977 - - - - - tubulin, alpha 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-5588]
81. znhit2 ENSDARG00000030805 197 0.976 - - - 0.976 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
82. taf1b ENSDARG00000028937 879 0.976 - - - 0.976 - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
83. rapgef5a ENSDARG00000075271 282 0.975 - - - 0.975 - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
84. fam151b ENSDARG00000020024 255 0.975 - - - 0.975 - - - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
85. syngr3a ENSDARG00000014871 405 0.974 - - - 0.974 - - - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
86. CABZ01051991.1 CABZ01051991.1 346 0.973 - - - 0.973 - - - - -
87. NHSL1 NHSL1 182 0.973 - - - 0.973 - - - - -
88. rims2a ENSDARG00000101606 1088 0.973 - - - 0.973 - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
89. slc5a3b ENSDARG00000077812 153 0.973 - - - 0.973 - - - - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-43]
90. TSHZ3 TSHZ3 369 0.972 - - - 0.972 - - - - -
91. lhx9 ENSDARG00000056979 249 0.971 - - - 0.971 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
92. ccdc173 ENSDARG00000077928 260 0.971 - - - 0.971 - - - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
93. CDK5R1 CDK5R1 562 0.971 - - - 0.971 - - - - -
94. fam49a ENSDARG00000006672 939 0.97 - - - 0.970 - - - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
95. supt20 ENSDARG00000078658 713 0.969 - - - 0.969 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
96. DHX36 ENSDARG00000101059 314 0.968 - - - 0.968 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
97. SPTBN4_1 ENSDARG00000092624 473 0.968 - - - 0.968 - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
98. ENSDARG00000058760 ENSDARG00000058760 1076 0.967 - - - 0.967 - - - - -
99. CU633775.1 ENSDARG00000113543 319 0.967 - - - 0.967 - - - - -
100. timm23 timm23 2712 0.967 - - - 0.967 - - - - -

There are 1009 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA