Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SH3TC1

Gene Name Gene ID Reads Annotation
SH3TC1 ENSDARG00000077330 8 SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]










Genes with expression patterns similar to SH3TC1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3TC1 ENSDARG00000077330 8 4 - 1.000 1.000 1.000 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
2. si:ch211-202h22.9 ENSDARG00000079980 2 2 - 1.000 - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
3. ptchd4 ENSDARG00000008249 17 1.824 - 0.919 - - 0.905 - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
4. IKZF4 ENSDARG00000037068 36 1.569 - - 0.751 - 0.818 - - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
5. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.557 - 0.824 - - 0.733 - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
6. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.526 - - - 0.779 0.747 - - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
7. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
8. MMP25 MMP25 0 1 - - - - 1.000 - - - -
9. NUGGC NUGGC 9 1 - 1.000 - - - - - - -
10. CR352258.1 CR352258.1 3 1 - - - - 1.000 - - - -
11. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - 1.000 - - - - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
12. si:ch211-198e13.3 5 1 - - - - 1.000 - - - - si:ch211-198e13.3, transcript variant X1
13. rnh1 ENSDARG00000086631 14 1 - 1.000 - - - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
14. clcf1 ENSDARG00000076140 5 1 - - - 1.000 - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
15. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
16. zgc:172131 ENSDARG00000076269 32 1 - - - - 1.000 - - - - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
17. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
18. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 1 - 1.000 - - - - - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
19. gfpt1 ENSDARG00000057465 14 1 - 1.000 - - - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
20. si:dkey-172k15.6 ENSDARG00000095717 0 1 - - - - 1.000 - - - - si:dkey-172k15.6 [Source:ZFIN;Acc:ZDB-GENE-121214-9]
21. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
22. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
23. mybpc1 ENSDARG00000045560 26 1 - 1.000 - - - - - - - myosin binding protein C, slow type [Source:ZFIN;Acc:ZDB-GENE-041114-196]
24. CSF3 CSF3 4 1 - - - - 1.000 - - - -
25. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
26. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - 1.000 - - - - - - -
27. BX546446.1 BX546446.1 0 1 - - - - 1.000 - - - -
28. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - 1.000 - - - -
29. mlphb ENSDARG00000062481 14 1 - - - - 1.000 - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
30. si:ch211-120f16.3 si:ch211-120f16.3 0 1 - - - - 1.000 - - - -
31. CU633740.1 CU633740.1 8 1 - - - - 1.000 - - - -
32. si:dkey-152b24.6 ENSDARG00000105043 39 1 - - - 1.000 - - - - - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
33. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
34. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 - - - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
35. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
36. sele ENSDARG00000009123 122 1 - - - - 1.000 - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
37. upk1a ENSDARG00000021866 9 1 - 1.000 - - - - - - - uroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
38. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - - - 1.000 - - - - -
39. trpm3 ENSDARG00000039181 2 1 - - - - 1.000 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
40. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
41. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 1 - - - - 1.000 - - - -
42. ssh1a ENSDARG00000056780 3 1 - - - - 1.000 - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
43. trim35-21 ENSDARG00000102303 7 1 - - - - 1.000 - - - - tripartite motif containing 35-21 [Source:ZFIN;Acc:ZDB-GENE-060503-673]
44. ttr ENSDARG00000037191 11 1 - - - 1.000 - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
45. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
46. CYP46A1 CYP46A1 16 1 - 1.000 - - - - - - -
47. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
48. CABZ01030889.1 CABZ01030889.1 4 1 - - - - 1.000 - - - -
49. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
50. ccdc24 ENSDARG00000038793 7 1 - - - - 1.000 - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
51. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - - 1.000 - - - -
52. si:dkey-105h11.2 13 1 - - - 1.000 - - - - - si:dkey-105h11.2
53. ENSDARG00000089797 ENSDARG00000089797 50 1 - - - 1.000 - - - - -
54. si:dkey-96l17.6 ENSDARG00000094540 4 1 - 1.000 - - - - - - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
55. CABZ01069022.1 ENSDARG00000105692 16 1 - 1.000 - - - - - - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
56. si:ch211-196c10.5 si:ch211-196c10.5 3 1 - - - 1.000 - - - - -
57. cryba2a ENSDARG00000030349 1342 1 - 1.000 - - - - - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
58. zgc:171220 ENSDARG00000102959 164 1 - 1.000 - - - - - - - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
59. slc5a5 ENSDARG00000005392 6 1 - - - - 1.000 - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
60. gtf2f2b ENSDARG00000006816 1 1 - - - - 1.000 - - - - general transcription factor IIF, polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-050417-374]
61. CU075911.1 CU075911.1 2 1 - - - 1.000 - - - - -
62. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
63. fam178a fam178a 29 1 - 1.000 - - - - - - -
64. U6_10 U6_10 0 1 - - - - 1.000 - - - -
65. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
66. U1_16 U1_16 0 1 - - - - 1.000 - - - -
67. edn3b ENSDARG00000086669 8 1 - - - - 1.000 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
68. cpdb ENSDARG00000053877 5 1 - - - - 1.000 - - - - carboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
69. lacc1 ENSDARG00000076914 11 1 - 1.000 - - - - - - - laccase (multicopper oxidoreductase) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-155]
70. btr27 btr27 0 1 - - - - 1.000 - - - -
71. oacyl ENSDARG00000075191 351 1 - - - - 1.000 - - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]
72. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1 - 1.000 - - - - - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
73. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
74. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 1 - - - - 1.000 - - - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
75. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
76. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
77. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
78. herc3 ENSDARG00000075887 41 1 - 1.000 - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
79. MAP3K13 ENSDARG00000009493 8 1 - 1.000 - - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
80. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
81. guk1b ENSDARG00000005776 23 1 - - - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
82. si:dkey-45k15.1 ENSDARG00000061714 32 1 - 1.000 - - - - - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
83. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - 1.000 - - - - - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
84. GPC6_1 GPC6_1 34 1 - - - - 1.000 - - - -
85. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
86. pax1b ENSDARG00000073814 105 1 - 1.000 - - - - - - - paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]
87. fgfr1b ENSDARG00000011190 10 1 - - - - 1.000 - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
88. btr16 ENSDARG00000028850 21 1 - 1.000 - - - - - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
89. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - 1.000 - - - - - - -
90. si:dkey-211g8.6 ENSDARG00000063088 19 1 - 1.000 - - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
91. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
92. RCVRN RCVRN 66 1 - 1.000 - - - - - - -
93. MDFI ENSDARG00000089564 8 1 - 1.000 - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
94. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
95. SNORD15 SNORD15 0 1 - - - - 1.000 - - - -
96. ENKD1 ENSDARG00000043550 44 1 - 1.000 - - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
97. tmem54 tmem54 3 1 - - - - 1.000 - - - -
98. fam86a fam86a 174 1 - 1.000 - - - - - - -
99. SAMD9L SAMD9L 10 1 - - - 1.000 - - - - -
100. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -

There are 673 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA