Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. CU856539.4 CU856539.4 0 1 - - 1.000 - - - - - -
6. myrip ENSDARG00000038814 103 1 1.000 - - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
7. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
8. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
9. tmem151a ENSDARG00000079908 2 1 1.000 - - - - - - - - transmembrane protein 151A [Source:ZFIN;Acc:ZDB-GENE-091118-118]
10. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - 1.000 - - - -
11. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
12. zgc:101560 1 1 - - - - 1.000 - - - - zgc:101560, transcript variant 2
13. U6_13 U6_13 0 1 - - 1.000 - - - - - -
14. ntrk1 ENSDARG00000004586 19 1 1.000 - - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
15. si:ch211-162i8.2 ENSDARG00000096041 4 1 - - - - 1.000 - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
16. CR387932.2 CR387932.2 3 1 - - - - 1.000 - - - -
17. C19H18orf21 C19H18orf21 338 1 - - - - 1.000 - - - -
18. dnah7 ENSDARG00000060165 21 1 1.000 - - - - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
19. CU570800.3 ENSDARG00000109285 0 1 - - - - 1.000 - - - -
20. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
21. si:dkey-44g23.9 si:dkey-44g23.9 1 1 - - - - 1.000 - - - -
22. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
23. cacng8a ENSDARG00000020450 32 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
24. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - 1.000 - - - -
25. si:ch1073-467m9.2 si:ch1073-467m9.2 2 1 - - - - 1.000 - - - -
26. mir15a-1 36 1 1.000 - - - - - - - - microRNA 15a-1
27. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
28. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
29. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
30. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
31. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
32. CACNA2D1_1 ENSDARG00000073752 2 1 1.000 - - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
33. pip5k1cb ENSDARG00000100313 3 1 - - 1.000 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
34. CR394546.2 ENSDARG00000090061 3 1 1.000 - - - - - - - -
35. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
36. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
37. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
38. ZAN ZAN 11 1 - - - - 1.000 - - - -
39. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
40. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
41. PLBD1 ENSDARG00000063313 1 1 1.000 - - - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
42. si:ch211-266a5.12 ENSDARG00000092714 10 1 - - - - 1.000 - - - - si:ch211-266a5.12 [Source:ZFIN;Acc:ZDB-GENE-081104-210]
43. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
44. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
45. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
46. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 1.000 - - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
47. BX601644.1 ENSDARG00000090632 2 1 - - - - 1.000 - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
48. zgc:172109 zgc:172109 0 1 - - - - 1.000 - - - -
49. hs6st3b ENSDARG00000069500 5 1 1.000 - - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
50. PLD1 PLD1 158 1 1.000 - - - - - - - -
51. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
52. CR942805.1 CR942805.1 94 1 - - - - 1.000 - - - -
53. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1 1.000 - - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
54. CABZ01079258.1 CABZ01079258.1 3 1 - - - - 1.000 - - - -
55. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
56. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
57. zzef1 ENSDARG00000094380 4 1 - - - - 1.000 - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
58. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
59. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 1 1.000 - - - - - - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
60. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 1.000 - - - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
61. si:ch211-28e16.5 ENSDARG00000093376 2 1 - - - - 1.000 - - - - si:ch211-28e16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-111]
62. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - - - 1.000 - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
63. si:ch211-277g23.4 si:ch211-277g23.4 0 1 - - - - 1.000 - - - -
64. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
65. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
66. CABZ01090951.1 CABZ01090951.1 78 1 1.000 - - - - - - - -
67. CU638737.1 CU638737.1 17 1 - - - - 1.000 - - - -
68. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
69. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
70. si:ch211-218d20.10 si:ch211-218d20.10 4 1 1.000 - - - - - - - -
71. U12 U12 14 1 - - - - 1.000 - - - -
72. gabbr1a ENSDARG00000018967 2 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
73. smpdl3a ENSDARG00000053119 1 1 - - - - 1.000 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
74. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
75. CABZ01080435.1 CABZ01080435.1 1 1 - - - - 1.000 - - - -
76. nid2b ENSDARG00000009471 4 1 - - - - 1.000 - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
77. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
78. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
79. celsr3 ENSDARG00000055825 1 1 - - - - 1.000 - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
80. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
81. smtlb ENSDARG00000017251 7 1 - - - - 1.000 - - - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
82. radil ENSDARG00000079779 14 1 - - - - 1.000 - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
83. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
84. PTCHD2 PTCHD2 2 1 1.000 - - - - - - - -
85. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
86. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
87. CABZ01021454.2 CABZ01021454.2 3 1 - - - - 1.000 - - - -
88. si:ch211-139g16.8 ENSDARG00000093074 13 1 - - - - 1.000 - - - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
89. nphs1 ENSDARG00000060758 5 1 - - - - 1.000 - - - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
90. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
91. si:ch211-209l18.6 si:ch211-209l18.6 0 1 - - - - 1.000 - - - -
92. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5
93. KCNA2_1 KCNA2_1 15 1 - - - - 1.000 - - - -
94. AL935200.4 AL935200.4 3 1 - - - - 1.000 - - - -
95. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - 1.000 - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
96. TNFRSF14_8 TNFRSF14_8 6 1 - - - - 1.000 - - - -
97. IMPG2 IMPG2 1 1 1.000 - - - - - - - -
98. pde11a ENSDARG00000063732 1 1 - - - - 1.000 - - - - phosphodiesterase 11a [Source:ZFIN;Acc:ZDB-GENE-070912-207]
99. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
100. si:ch211-225h9.2 si:ch211-225h9.2 16 1 1.000 - - - - - - - -

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA