Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. PAK6 PAK6 5 1 - - 1.000 - - - - - -
6. si:dkey-24i24.3 ENSDARG00000088452 27 1 1.000 - - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
7. CABZ01074946.1 CABZ01074946.1 119 1 1.000 - - - - - - - -
8. s1pr5b ENSDARG00000052192 52 1 - - 1.000 - - - - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
9. TTF1_3 TTF1_3 215 1 1.000 - - - - - - - -
10. PATL2 PATL2 10 1 - - - - 1.000 - - - -
11. dcp2_1 ENSDARG00000104242 74 1 1.000 - - - - - - - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
12. itprip ENSDARG00000015576 62 1 1.000 - - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
13. kdr ENSDARG00000017321 31 1 - - 1.000 - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
14. fshr ENSDARG00000071494, ENSDARG00000112820 3 1 - - - - 1.000 - - - - follicle stimulating hormone receptor [Source:ZFIN;Acc:ZDB-GENE-020423-5]
15. BX324142.2 ENSDARG00000117006 1 1 - - - - 1.000 - - - -
16. ak5 ENSDARG00000012555 12 1 - - 1.000 - - - - - - adenylate kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8256]
17. slc35f1 ENSDARG00000053003 0 1 - - 1.000 - - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
18. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
19. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
20. si:ch73-44m9.1 ENSDARG00000077115 3 1 1.000 - - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
21. si:dkey-264b2.3 19 1 1.000 - - - - - - - - si:dkey-264b2.3, transcript variant X2
22. wdr20b ENSDARG00000041239 0 1 - - - - 1.000 - - - - WD repeat domain 20b [Source:ZFIN;Acc:ZDB-GENE-041014-234]
23. mhc1zaa_2 ENSDARG00000092162 0 1 - - 1.000 - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
24. rom1b ENSDARG00000026926 4 1 - - 1.000 - - - - - - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
25. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
26. CABZ01116714.1 CABZ01116714.1 4 1 - - 1.000 - - - - - -
27. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
28. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 1.000 - - - - - - - - RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
29. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
30. BX897714.3 BX897714.3 3 1 - - - - 1.000 - - - -
31. si:dkey-43k4.4 si:dkey-43k4.4 4 1 1.000 - - - - - - - -
32. aire ENSDARG00000056784 0 1 - - - - 1.000 - - - - autoimmune regulator [Source:ZFIN;Acc:ZDB-GENE-071008-4]
33. CABZ01071058.1 CABZ01071058.1 4 1 - - 1.000 - - - - - -
34. 5_8S_rRNA_5 5_8S_rRNA_5 1 1 - - 1.000 - - - - - -
35. aglb ENSDARG00000100352 22 1 1.000 - - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
36. CDH7 16 1 1.000 - - - - - - - - cadherin 7, type 2, transcript variant X1
37. dnah9 ENSDARG00000103383 2 1 - - - - 1.000 - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
38. BX000477.1 BX000477.1 1 1 - - 1.000 - - - - - -
39. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1 1.000 - - - - - - - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
40. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 1.000 - - - - - - - -
41. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 1.000 - - - - - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
42. CR759816.1 ENSDARG00000098977 27 1 - - - - 1.000 - - - -
43. BX005294.3 BX005294.3 0 1 - - 1.000 - - - - - -
44. BX323035.1 ENSDARG00000096937 0 1 - - - - 1.000 - - - -
45. tirap ENSDARG00000074371 10 1 - - - - 1.000 - - - - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
46. BX119910.8 BX119910.8 6 1 1.000 - - - - - - - -
47. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - 1.000 - - - - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
48. cpa2 ENSDARG00000010146 28 1 1.000 - - - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
49. si:ch211-277e21.1 ENSDARG00000096800 1 1 - - - - 1.000 - - - - si:ch211-277e21.1 [Source:ZFIN;Acc:ZDB-GENE-130603-84]
50. TRIM14_12 TRIM14_12 1 1 - - - - 1.000 - - - -
51. PLCB1 2 1 - - 1.000 - - - - - - phospholipase C beta 1
52. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - 1.000 - - - - - -
53. EMB ENSDARG00000059485 35 1 1.000 - - - - - - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
54. FP015916.1 FP015916.1 3 1 - - - - 1.000 - - - -
55. BX470224.1 ENSDARG00000092793 22 1 - - - - 1.000 - - - -
56. ripply2 ENSDARG00000070535 18 1 1.000 - - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
57. RORC ENSDARG00000087195 9 1 - - 1.000 - - - - - - RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
58. ppp1r37_1 ENSDARG00000078458 36 1 - - - - 1.000 - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
59. pla2g4a pla2g4a 7 1 - - - - 1.000 - - - -
60. ZBED1_4 ZBED1_4 2 1 - - 1.000 - - - - - -
61. CR936371.2 ENSDARG00000117302 2 1 - - 1.000 - - - - - -
62. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - 1.000 - - - - - -
63. rrh ENSDARG00000039534 4 1 - - - - 1.000 - - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
64. CABZ01086801.1 CABZ01086801.1 41 1 - - - - 1.000 - - - -
65. si:dkey-20i20.3 ENSDARG00000092246 4 1 - - 1.000 - - - - - - si:dkey-20i20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-623]
66. creb5b ENSDARG00000070536 9 1 - - 1.000 - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
67. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 1 - - - - 1.000 - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
68. P2RY11 ENSDARG00000014929 75 1 1.000 - - - - - - - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
69. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 1 - - 1.000 - - - - - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
70. VTCN1 ENSDARG00000078643 0 1 - - - - 1.000 - - - - V-set domain containing T cell activation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-070912-388]
71. TRAF2 TRAF2 13 1 - - 1.000 - - - - - -
72. PDE1C PDE1C 1 1 1.000 - - - - - - - -
73. got1 ENSDARG00000039093 1 1 1.000 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
74. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - 1.000 - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
75. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
76. FAM13C FAM13C 1 1 - - - - 1.000 - - - -
77. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1 - - 1.000 - - - - - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
78. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
79. BSN_1 BSN_1 21 1 - - - - 1.000 - - - -
80. wnt5a ENSDARG00000104973 21 1 1.000 - - - - - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
81. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - - - 1.000 - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
82. GABRR3 GABRR3 3 1 - - 1.000 - - - - - -
83. CR382372.1 ENSDARG00000096684 2 1 1.000 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
84. sycp2 ENSDARG00000088950 3 1 1.000 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
85. abhd8 abhd8 0 1 - - - - 1.000 - - - -
86. smad6b ENSDARG00000031763 12 1 - - - - 1.000 - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
87. zgc:101553 zgc:101553 1 1 - - 1.000 - - - - - -
88. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
89. tlr8b ENSDARG00000073675 0 1 - - - - 1.000 - - - - toll-like receptor 8b [Source:ZFIN;Acc:ZDB-GENE-040219-12]
90. gpc2 ENSDARG00000104217 10 1 - - - - 1.000 - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
91. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
92. si:dkey-230i18.1 si:dkey-230i18.1 3 1 - - 1.000 - - - - - -
93. tnr ENSDARG00000020771 20 1 1.000 - - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
94. prelp ENSDARG00000070597 99 1 - - 1.000 - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
95. gabrr2a ENSDARG00000052982 21 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
96. zgc:112958 zgc:112958 5 1 - - - - 1.000 - - - -
97. BX649394.1 BX649394.1 1 1 - - - - 1.000 - - - -
98. ros1 ENSDARG00000087197 9 1 - - 1.000 - - - - - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
99. lrp2b ENSDARG00000007906 23 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
100. mki67ip mki67ip 0 1 - - 1.000 - - - - - -

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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