Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RLTPR

Gene Name Gene ID Reads Annotation
RLTPR 1158 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1










Genes with expression patterns similar to RLTPR

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RLTPR 1158 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
2. tuba1c ENSDARG00000055216 8384 3.149 - - - - - 0.778 0.825 0.717 0.829 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
3. gap43 ENSDARG00000099744 4114 3.117 - - - - - 0.762 0.800 0.744 0.811 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
4. nbeaa ENSDARG00000070080 862 3.099 - - - - - 0.737 0.817 0.719 0.826 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
5. coe2 coe2 1633 3.065 - - - - - 0.763 0.722 0.777 0.803
6. hmgb3a ENSDARG00000056725 15668 3.043 0.708 - - - - 0.792 0.805 - 0.738 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
7. ssbp4 ENSDARG00000056483 10196 3.041 0.751 - - - - 0.770 0.750 0.770 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
8. pou3f2a ENSDARG00000070220 817 3.023 - - - - - 0.708 0.785 0.763 0.767 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
9. fez1 ENSDARG00000023174 701 3.017 - - - - - 0.706 0.792 0.751 0.768 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
10. marcksa ENSDARG00000004049 2518 3.011 0.709 - - - - - 0.764 0.747 0.791 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
11. mllt11 ENSDARG00000071026 2518 3.009 - - - - - 0.745 0.729 0.707 0.828 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
12. rbm25 rbm25 3629 3.008 - 0.738 - - - 0.752 0.770 - 0.748
13. pacsin1b ENSDARG00000042128 1051 2.985 - 0.729 - - - 0.706 0.819 - 0.731 protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
14. st18 663 2.932 - - - - - 0.701 0.760 0.739 0.732 suppression of tumorigenicity 18, zinc finger
15. RASGRF2 RASGRF2 644 2.897 - - - - - 0.740 0.721 0.706 0.730
16. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.468 - - - - - - 0.923 0.792 0.753 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
17. nkain1 ENSDARG00000006859 1961 2.43 - - - - - 0.801 0.902 - 0.727 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
18. rcor2 ENSDARG00000008278 1678 2.411 - - - - - 0.829 0.759 0.823 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
19. mta2 ENSDARG00000013031 2932 2.398 - 0.788 - - - - 0.795 0.815 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
20. dpysl5a ENSDARG00000011141 1827 2.398 - - - - - 0.716 0.856 - 0.826 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
21. hoxa9b ENSDARG00000056819 3081 2.394 - 0.766 - - - 0.769 0.859 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
22. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.384 - - - - - - 0.871 0.748 0.765 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
23. rab3ab ENSDARG00000043835 1267 2.38 0.714 - - - - 0.823 0.843 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
24. C7H4orf48 C7H4orf48 1455 2.376 - - - - - 0.762 0.785 0.829 -
25. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.376 - - - - - - 0.810 0.752 0.814 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
26. dpysl3 ENSDARG00000002587 4381 2.371 - - - - - 0.773 0.827 - 0.771 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
27. dnajc5aa ENSDARG00000042948 2885 2.37 - - - - - 0.811 0.852 - 0.707 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
28. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.364 - - - - - - 0.801 0.795 0.768 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
29. tmsb ENSDARG00000054911 6411 2.348 - - - - - 0.830 0.802 - 0.716 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
30. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.347 - - - - - 0.809 0.782 - 0.756 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
31. nrarpb ENSDARG00000018958 6225 2.343 - - - - - 0.747 0.818 - 0.778 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
32. irx1a ENSDARG00000101831 644 2.334 - - - - - - 0.769 0.844 0.721 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
33. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.333 - - - - - 0.806 0.816 0.711 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
34. ZFHX3 ENSDARG00000103057 7759 2.329 - - - - - 0.746 0.821 0.762 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
35. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.326 - - - - - 0.729 0.816 - 0.781
36. clvs2 ENSDARG00000053122 1390 2.325 - - - - - - 0.763 0.762 0.800 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
37. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.325 - - - - - 0.718 0.849 - 0.758 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
38. hnrnpub ENSDARG00000004735 16496 2.322 - - - - - 0.707 0.788 - 0.827 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
39. rap2ip rap2ip 681 2.322 - - - - - 0.767 0.778 - 0.777
40. tox ENSDARG00000032317 9126 2.321 - - - - - 0.717 0.834 - 0.770 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
41. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.318 - - - - - - 0.730 0.781 0.807 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
42. SPOCK1 ENSDARG00000074644 794 2.317 - - - - - 0.787 0.802 0.728 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
43. pax3a ENSDARG00000010192 626 2.314 0.719 - - - - 0.713 0.882 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
44. cadm3 ENSDARG00000057013 1545 2.305 - - - - - 0.794 0.798 - 0.713 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
45. FP016176.1 FP016176.1 7030 2.305 - 0.773 - - - 0.736 0.796 - -
46. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.299 - 0.752 - - - 0.777 0.770 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
47. negr1 ENSDARG00000021607 1051 2.294 - - - - - 0.773 0.788 - 0.733 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
48. rtn1b ENSDARG00000021143 1682 2.291 - - - - - 0.744 0.836 - 0.711 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
49. gnao1a ENSDARG00000016676 8184 2.29 - - - - - - 0.826 0.744 0.720 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
50. ndrg4 ENSDARG00000103937 1234 2.28 - - - - - 0.749 0.779 - 0.752 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
51. itm2ca ENSDARG00000043448 1265 2.272 - - - - - 0.752 0.790 0.730 - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
52. pak2b ENSDARG00000018476 4331 2.265 - 0.729 - - - - 0.828 - 0.708 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
53. syngr3a ENSDARG00000014871 405 2.262 - - - - - 0.733 0.807 0.722 - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
54. lhx1a ENSDARG00000014018 958 2.262 - - - - - 0.757 0.769 - 0.736 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
55. CYTH2 ENSDARG00000028800 2349 2.258 - - - - - 0.718 0.791 - 0.749 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
56. rufy3 ENSDARG00000029692 3031 2.258 0.737 - - - - 0.786 0.735 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
57. foxk2 ENSDARG00000030583 2982 2.256 - - - - - 0.741 0.754 0.761 - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
58. TMEM57 TMEM57 260 2.254 - - - - - - 0.782 0.701 0.771
59. vezf1a ENSDARG00000008247 1449 2.252 - - - - - 0.766 0.719 - 0.767 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
60. scamp5 scamp5 797 2.248 - - - - - 0.709 0.755 0.784 -
61. her4.1 ENSDARG00000056732 1264 2.242 - - - - - 0.755 0.727 0.760 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
62. snrpc ENSDARG00000009871 9567 2.235 - - - - - - 0.710 0.728 0.797 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
63. ARHGAP22 ENSDARG00000076434 1406 2.232 0.763 - - - - 0.739 - - 0.730 Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
64. nadl1.1 1200 2.223 - - - - - 0.710 0.775 - 0.738 neural adhesion molecule L1.1, transcript variant X1
65. Sep-03 Sep-03 1124 2.205 - - - - - 0.733 0.712 - 0.760
66. whsc1l1 8544 2.194 - - - - - 0.722 0.770 - 0.702 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
67. her4.3 ENSDARG00000070770 613 2.181 - - - - - - 0.739 0.735 0.707 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
68. smarce1 ENSDARG00000016871 9628 2.179 - - - - - 0.722 0.756 0.701 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
69. nr2f1a ENSDARG00000052695 5037 2.176 - - - - - 0.705 - 0.745 0.726 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
70. zgc:113348 ENSDARG00000103795 1351 2.17 0.723 - - - - - 0.731 0.716 - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
71. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.168 - - - - - 0.718 0.749 - 0.701 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
72. wasf3 wasf3 3287 1.718 - - - - - 0.874 0.844 - -
73. sdcbp ENSDARG00000030097 196 1.693 - - - - - 0.754 0.939 - - syndecan binding protein (syntenin) [Source:ZFIN;Acc:ZDB-GENE-081104-57]
74. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.662 - - - - - - 0.826 - 0.836 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
75. ADAM22 ENSDARG00000060532 2259 1.655 - - - - - - 0.798 0.857 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
76. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.652 - - - - - 0.828 0.824 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
77. AKT3 AKT3 1729 1.651 - - - - - 0.811 0.840 - -
78. CBFA2T3 ENSDARG00000079012 6799 1.648 - - - - - 0.768 0.880 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
79. amph ENSDARG00000007663 599 1.646 - - - - - 0.784 0.862 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
80. zmiz1a ENSDARG00000074502 3920 1.644 - - - - - 0.788 0.856 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
81. stx1b ENSDARG00000000503 2724 1.642 - - - - - 0.811 0.831 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
82. fam219ab ENSDARG00000013813 591 1.639 - - - - - 0.836 0.803 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
83. INA INA 950 1.635 - - - - - 0.815 0.820 - -
84. gsx1 ENSDARG00000035735 1243 1.633 - - - - - 0.800 0.833 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
85. grin1a ENSDARG00000027828 1327 1.632 - - - - - 0.815 0.817 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
86. ptbp2b ENSDARG00000015901 2458 1.629 - - - - - - 0.855 - 0.774 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
87. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 1.627 - - - - - 0.743 0.884 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
88. CABZ01111990.1 CABZ01111990.1 4374 1.626 - - - - - - 0.843 0.783 -
89. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.625 - - - - - 0.793 0.832 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
90. map7d2a ENSDARG00000068480 513 1.622 - - - - - 0.814 0.808 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
91. chd7 ENSDARG00000075211 12085 1.62 - - - - - 0.738 0.882 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
92. pou3f3a ENSDARG00000042032 2835 1.62 - - - - - 0.739 0.881 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
93. clstn3 ENSDARG00000073883 590 1.62 - - - - - 0.783 0.837 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
94. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.62 - - - - - 0.822 0.798 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
95. cnrip1a ENSDARG00000091683 1491 1.617 - - - - - - 0.823 0.794 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
96. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.615 - - - - - - 0.824 - 0.791 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
97. scn8aa ENSDARG00000005775 792 1.615 - - - - - 0.791 0.824 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
98. gfap ENSDARG00000025301 5584 1.614 - - - - - 0.791 0.823 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
99. pcsk1 ENSDARG00000002600 404 1.61 - - - - - 0.779 0.831 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
100. ccdc92 ENSDARG00000041750, ENSDARG00000115475 283 1.608 - - - - - 0.801 0.807 - - coiled-coil domain containing 92 [Source:ZFIN;Acc:ZDB-GENE-051113-120]

There are 1592 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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