Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PGBD1

Gene Name Gene ID Reads Annotation
PGBD1 PGBD1 61










Genes with expression patterns similar to PGBD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PGBD1 PGBD1 61 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000
2. si:ch211-10j20.1 si:ch211-10j20.1 24 1.879 - - - 1.000 - 0.879 - - -
3. SNORD88 SNORD88 232 1.731 - - - - 0.852 0.879 - - -
4. fabp10a ENSDARG00000038439 4 1.675 0.796 - - - - 0.879 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
5. CU571310.1 ENSDARG00000102580 53 1.656 - 0.777 - - - 0.879 - - - ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
6. ciz1b ENSDARG00000089461 57 1.652 0.796 - - - - 0.856 - - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
7. cnr1 ENSDARG00000009020 33 1.643 - - - - 0.764 0.879 - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
8. dzank1 ENSDARG00000055787, ENSDARG00000111473 26 1.617 - - - - 0.738 0.879 - - - double zinc ribbon and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-051113-296]
9. trim35-1 ENSDARG00000052037 43 1.609 - 0.733 - - 0.876 - - - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
10. ndp ENSDARG00000076569 120 1.582 - 0.707 - - 0.875 - - - - Norrie disease (pseudoglioma) [Source:ZFIN;Acc:ZDB-GENE-060216-2]
11. dnajc4 ENSDARG00000024090, ENSDARG00000114838 403 1.566 - 0.723 - - 0.843 - - - - DnaJ (Hsp40) homolog, subfamily C, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3093]
12. CABZ01032454.1 CABZ01032454.1 7 1 1.000 - - - - - - - -
13. zgc:173619_1 2 1 - - - 1.000 - - - - - zgc:173619
14. cmklr1 ENSDARG00000090890 37 1 1.000 - - - - - - - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
15. tmem125b ENSDARG00000075980 2 1 - - - 1.000 - - - - - transmembrane protein 125b [Source:ZFIN;Acc:ZDB-GENE-080220-54]
16. eno1b ENSDARG00000013750 63 1 1.000 - - - - - - - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
17. BX324003.3 BX324003.3 1 1 - - - 1.000 - - - - -
18. caspbl ENSDARG00000094433 1 1 - - - 1.000 - - - - - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
19. CU633991.1 CU633991.1 16 1 1.000 - - - - - - - -
20. rem2 ENSDARG00000074064, ENSDARG00000109687 219 1 1.000 - - - - - - - - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
21. pnrc1 ENSDARG00000043904 74 1 1.000 - - - - - - - - proline-rich nuclear receptor coactivator 1 [Source:ZFIN;Acc:ZDB-GENE-040724-189]
22. pcsk9 ENSDARG00000074185 8 1 - - - 1.000 - - - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]
23. si:ch211-133l5.4 ENSDARG00000092533 5 1 - - - 1.000 - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
24. si:ch211-234c11.3 ENSDARG00000093615 1 1 - - - 1.000 - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
25. si:ch211-259i2.2 si:ch211-259i2.2 45 1 1.000 - - - - - - - -
26. RD3L RD3L 15 1 - - - 1.000 - - - - -
27. si:zfos-754c12.2 ENSDARG00000089747 0 1 - - - 1.000 - - - - - si:zfos-754c12.2 [Source:ZFIN;Acc:ZDB-GENE-130531-27]
28. pcdh15b ENSDARG00000008127 2 1 - - - 1.000 - - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
29. mcm5_2 ENSDARG00000019507 66 1 1.000 - - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
30. arrb2a ENSDARG00000039215 5 1 - - - 1.000 - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
31. CMKLR1_1 CMKLR1_1 2 1 - - - 1.000 - - - - -
32. CT583679.2 CT583679.2 10 1 - - - 1.000 - - - - -
33. zgc:153681 ENSDARG00000086017 0 1 - - - 1.000 - - - - - zgc:153681 [Source:ZFIN;Acc:ZDB-GENE-060825-299]
34. DNAH10 ENSDARG00000061486 29 1 1.000 - - - - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
35. NRP2 NRP2 5 1 - - - 1.000 - - - - -
36. CR855273.1 CR855273.1 2 1 - - - 1.000 - - - - -
37. si:ch211-244h4.1 si:ch211-244h4.1 1 1 - - - 1.000 - - - - -
38. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - 1.000 - - - - -
39. si:dkey-29b11.3 ENSDARG00000087388 29 1 - - - 1.000 - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
40. AC024175.21 AC024175.21 10 1 - - - 1.000 - - - - -
41. CR774179.1 ENSDARG00000086969 3 1 - - - 1.000 - - - - -
42. ldhbb ENSDARG00000071076 31 1 1.000 - - - - - - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
43. C20H2orf44 C20H2orf44 486 1 1.000 - - - - - - - -
44. mag ENSDARG00000104023 7 1 - - - 1.000 - - - - - myelin associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-041217-24]
45. UNC119 UNC119 104 1 - - - 1.000 - - - - -
46. PEG3_15 PEG3_15 113 1 1.000 - - - - - - - -
47. zdhhc18b ENSDARG00000105034 1 1 - - - 1.000 - - - - - zinc finger, DHHC-type containing 18b [Source:ZFIN;Acc:ZDB-GENE-030131-6315]
48. CU550716.4 CU550716.4 14 1 - - - 1.000 - - - - -
49. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - - - 1.000 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
50. zgc:114037_1 10 1 - - - 1.000 - - - - - zgc:114037
51. COPS6 5 1 - - - 1.000 - - - - - COP9 signalosome subunit 6
52. ANO2 ENSDARG00000101363 1 1 - - - 1.000 - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
53. APOD_1 APOD_1 7 1 - - - 1.000 - - - - -
54. zgc:114037_3 17 1 - - - 1.000 - - - - - zgc:114037
55. NINL ENSDARG00000098414 0 1 - - - 1.000 - - - - - ninein-like [Source:ZFIN;Acc:ZDB-GENE-130530-768]
56. DYNLRB2 DYNLRB2 12 1 1.000 - - - - - - - -
57. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - - - 1.000 - - - - -
58. si:ch73-176g19.2 si:ch73-176g19.2 2 1 - - - 1.000 - - - - -
59. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - - 1.000 - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
60. cldn17 ENSDARG00000099950 14 1 - - - 1.000 - - - - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
61. CABZ01064973.2 CABZ01064973.2 0 1 - - - 1.000 - - - - -
62. CR853287.1 CR853287.1 6 1 - - - 1.000 - - - - -
63. si:rp71-36a1.5 ENSDARG00000077252, ENSDARG00000090882 2 1 - - - 1.000 - - - - - si:rp71-36a1.5 [Source:ZFIN;Acc:ZDB-GENE-091204-428]
64. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 - - - 1.000 - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
65. RIC3 ENSDARG00000105549 3 1 - - - 1.000 - - - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
66. BX470254.1_1 ENSDARG00000097402 50 1 - - - 1.000 - - - - -
67. zte38 ENSDARG00000037056 0 1 - - - 1.000 - - - - - zebrafish testis-expressed 38 [Source:ZFIN;Acc:ZDB-GENE-060312-39]
68. pdk3a ENSDARG00000014527 15 1 - - - 1.000 - - - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
69. BX323793.4 BX323793.4 8 1 - - - 1.000 - - - - -
70. si:ch211-208f21.2 ENSDARG00000094177 61 1 - - - 1.000 - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
71. si:dkey-283b1.7 ENSDARG00000053460 10 1 - - - 1.000 - - - - - si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
72. si:dkey-237j11.3 ENSDARG00000094303 1 1 - - - 1.000 - - - - - si:dkey-237j11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-239]
73. vrk2 ENSDARG00000021547 45 1 1.000 - - - - - - - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
74. saga ENSDARG00000012610 63 1 1.000 - - - - - - - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
75. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - - - 1.000 - - - - -
76. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1 - - - 1.000 - - - - - opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
77. SLC22A7_1 SLC22A7_1 2 1 - - - 1.000 - - - - -
78. paqr7a ENSDARG00000100462 15 1 - - - 1.000 - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
79. nrn1b ENSDARG00000042656 44 1 1.000 - - - - - - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
80. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - 1.000 - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
81. SPAG16 7 1 - - - 1.000 - - - - - sperm associated antigen 16
82. lactbl1a ENSDARG00000089063, ENSDARG00000114144, ENSDARG00000116950 0 1 - - - 1.000 - - - - - lactamase, beta-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7625]
83. ighv1-2 ENSDARG00000096350 8 0.982 - - - - 0.982 - - - - immunoglobulin heavy variable 1-2 [Source:ZFIN;Acc:ZDB-GENE-030924-2]
84. CCDC83 ENSDARG00000077179 29 0.982 - - - - 0.982 - - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
85. lacc1 ENSDARG00000076914 11 0.982 - - - - 0.982 - - - - laccase (multicopper oxidoreductase) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-155]
86. zgc:154054 ENSDARG00000099923 19 0.982 - - - - 0.982 - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
87. ppil6 ENSDARG00000042157 45 0.982 - - - - 0.982 - - - - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
88. lrrc18a ENSDARG00000078790 4 0.982 - - - - 0.982 - - - - leucine rich repeat containing 18a [Source:ZFIN;Acc:ZDB-GENE-090313-323]
89. si:ch211-210m1.1 si:ch211-210m1.1 4 0.982 - - - - 0.982 - - - -
90. CABZ01078481.1 CABZ01078481.1 6 0.982 - - - - 0.982 - - - -
91. CCDC13 ENSDARG00000063451 10 0.982 - - - - 0.982 - - - - coiled-coil domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-061207-11]
92. sult1st3 ENSDARG00000018361 7 0.982 - - - - 0.982 - - - - sulfotransferase family 1, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030804-28]
93. fam150ba 4 0.982 - - - - 0.982 - - - - family with sequence similarity 150, member Ba, transcript variant X3
94. si:dkey-121n8.5 si:dkey-121n8.5 10 0.981 - - - - 0.981 - - - -
95. si:dkey-22l11.6 ENSDARG00000070126 27 0.981 - - - - 0.981 - - - - si:dkey-22l11.6 [Source:ZFIN;Acc:ZDB-GENE-041210-251]
96. SERINC3 SERINC3 21 0.981 - - - - 0.981 - - - -
97. chmp6b ENSDARG00000102024 37 0.981 - - - - 0.981 - - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
98. p2rx4b ENSDARG00000042452 14 0.981 - - - - 0.981 - - - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
99. si:dkey-17m8.2 ENSDARG00000035797 40 0.98 - - - - 0.980 - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
100. mink1 ENSDARG00000035360, ENSDARG00000112785 13 0.98 - - - - 0.980 - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]

There are 573 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA