Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PDZD4

Gene Name Gene ID Reads Annotation
PDZD4 ENSDARG00000090564 131 PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]










Genes with expression patterns similar to PDZD4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PDZD4 ENSDARG00000090564 131 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
2. pou4f1 ENSDARG00000005559 821 2.72 0.894 - - - - 0.904 0.922 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
3. nmu ENSDARG00000043299 67 2.642 0.930 - - - - 0.910 0.802 - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
4. Mar-09 Mar-09 126 2.612 0.858 - - - - 0.832 0.922 - -
5. nlgn3b ENSDARG00000062376 171 2.56 0.930 - - - - 0.760 0.870 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
6. tlx2 ENSDARG00000011273 870 2.495 0.886 - - - - 0.871 0.738 - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
7. elavl4 ENSDARG00000045639 998 2.491 0.841 - - - - 0.746 0.904 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
8. evx2 ENSDARG00000059255 317 2.488 - - - - - 0.903 0.838 0.747 - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
9. cspg5a ENSDARG00000069981 1699 2.481 0.859 - - - - 0.760 0.862 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
10. NSUN6 ENSDARG00000103478 29 2.478 0.930 - 0.746 - - - 0.802 - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
11. si:dkey-122c11.4 si:dkey-122c11.4 13 2.477 0.765 - - - - 0.910 0.802 - -
12. scn2b ENSDARG00000101713 796 2.456 0.708 - - - - 0.835 0.913 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
13. adam11 ENSDARG00000079204 298 2.449 0.851 - - - - 0.816 0.782 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
14. dbx2 2971 2.449 0.742 - - - - 0.817 0.890 - - developing brain homeobox 2
15. necab2 ENSDARG00000056745, ENSDARG00000110976 304 2.427 0.764 - - - - 0.871 0.792 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
16. ATP6AP1L ATP6AP1L 164 2.419 0.711 - - - - 0.880 0.828 - -
17. gng3 ENSDARG00000009553 2530 2.408 0.795 - - - - 0.736 0.877 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
18. rbfox3 rbfox3 1443 2.393 0.738 - - - - 0.803 0.852 - -
19. CAMSAP3 ENSDARG00000059475 263 2.388 0.713 - - - - 0.908 0.767 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
20. FGFBP3 FGFBP3 993 2.371 0.765 - - - - 0.728 0.878 - -
21. snap25b ENSDARG00000058117 469 2.363 0.742 - - - - 0.867 0.754 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
22. csf1b ENSDARG00000068263 248 2.354 0.846 - - - - 0.794 0.714 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
23. syt3 ENSDARG00000075830 430 2.349 0.723 - - - - 0.861 0.765 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
24. dpysl3 ENSDARG00000002587 4381 2.326 0.724 - - - - 0.734 0.868 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
25. celf4 ENSDARG00000070045 1537 2.308 0.713 - - - - 0.701 0.894 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
26. si:dkey-253a1.2 si:dkey-253a1.2 52 2.281 0.714 - - - - 0.867 0.700 - -
27. gria4a ENSDARG00000037496 88 2.279 0.791 - - - - 0.706 0.782 - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
28. slc1a2b ENSDARG00000102453 3136 2.279 0.704 - - - - 0.738 0.837 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
29. scn8aa ENSDARG00000005775 792 2.275 0.726 - - - - 0.739 0.810 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
30. kcnd1 ENSDARG00000074746 153 2.268 0.756 - - - - 0.739 0.773 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
31. nefmb ENSDARG00000043697 2052 2.26 0.741 - - - - 0.735 0.784 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
32. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.903 0.939 - - - - 0.964 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
33. CU179656.1 ENSDARG00000107086 270 1.89 0.956 - - - - 0.934 - - -
34. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.86 0.958 - - - - - 0.902 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
35. scn1bb ENSDARG00000105003 239 1.856 - - - - - 0.948 0.908 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
36. cuedc1a ENSDARG00000068716 232 1.853 - - - - - 0.962 0.891 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
37. WNK2 ENSDARG00000104989 429 1.85 - - - - - 0.929 0.921 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
38. ANKRD13D ENSDARG00000098140 88 1.85 0.930 - - - - - 0.920 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
39. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.816 - - - - - 0.890 0.926 - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
40. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.8 0.860 - - - - - 0.940 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
41. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.799 - - - - - 0.997 0.802 - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
42. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.788 0.965 - - - - - 0.823 - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
43. prdm13 ENSDARG00000078701 205 1.787 - - - - - 0.964 0.823 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
44. lhx5 ENSDARG00000057936 785 1.787 0.861 - - - - - 0.926 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
45. fsd1 ENSDARG00000062017 207 1.785 - - - - - 0.894 0.891 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
46. ncam1b ENSDARG00000007220 233 1.785 - - - - - 0.823 0.962 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
47. entpd3 ENSDARG00000035309 263 1.783 0.981 - - - - - 0.802 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
48. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.779 0.904 - - - - - 0.875 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
49. lrrn3 lrrn3 137 1.774 0.922 - - - - - 0.852 - -
50. ppp2r2c ppp2r2c 441 1.774 - - - - - 0.887 0.887 - -
51. thsd7a thsd7a 194 1.774 - - - - - 0.923 0.851 - -
52. cdk5r2a ENSDARG00000071011 167 1.763 0.890 - - - - - 0.873 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
53. pnoca ENSDARG00000025024 467 1.754 0.870 - - - - - 0.884 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
54. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.754 0.826 - - - - - 0.928 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
55. sv2bb ENSDARG00000060711 196 1.75 0.885 - - - - - 0.865 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
56. LMTK3 LMTK3 222 1.747 0.910 - - - - - 0.837 - -
57. MAN1B1 MAN1B1 47 1.741 0.872 - - - - 0.869 - - -
58. b3gat2 ENSDARG00000030733 348 1.737 0.867 - - - - 0.870 - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
59. CDH12 CDH12 44 1.734 - - - - - 0.915 0.819 - -
60. BRINP3 BRINP3 11 1.733 - - - - - 0.910 0.823 - -
61. INA INA 950 1.727 0.850 - - - - - 0.877 - -
62. rac3a ENSDARG00000090062 394 1.723 - - - - - 0.869 0.854 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
63. MAPK8IP1_1 MAPK8IP1_1 186 1.722 0.863 - - - - - 0.859 - -
64. adam23a ENSDARG00000062323 580 1.722 0.963 - - - - - 0.759 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
65. fgf13b ENSDARG00000056633 455 1.718 0.972 - - - - - 0.746 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
66. ppp3ca ENSDARG00000004988 615 1.716 0.881 - - - - - 0.835 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
67. sez6l ENSDARG00000100594 35 1.714 0.765 - - - - 0.949 - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
68. si:ch211-214c7.4 ENSDARG00000069595 56 1.712 - - - - - 0.910 0.802 - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
69. hivep3a ENSDARG00000075928 17 1.712 - - - - - 0.910 0.802 - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
70. skor1a ENSDARG00000069030 19 1.712 - - - - - 0.910 0.802 - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
71. PLCB1 2 1.712 - - - - - 0.910 0.802 - - phospholipase C beta 1
72. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1.712 - - - - - 0.910 0.802 - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
73. SV2B SV2B 208 1.711 0.780 - - - - - 0.931 - -
74. wnt10b ENSDARG00000040925 162 1.709 0.799 - - - - 0.910 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
75. cadm3 ENSDARG00000057013 1545 1.707 0.777 - - - - - 0.930 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
76. APBB3 ENSDARG00000053771 654 1.707 0.836 - - - - - 0.871 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
77. lbx1a ENSDARG00000018321 634 1.705 0.962 - - - - 0.743 - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
78. scrt2 ENSDARG00000056175 4331 1.704 0.871 - - - - - 0.833 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
79. CABZ01070258.1 ENSDARG00000105687 3643 1.698 0.806 - - - - - 0.892 - -
80. NTRK3 NTRK3 163 1.696 0.825 - - - - - 0.871 - -
81. sypb ENSDARG00000002230 262 1.693 - - - - - 0.833 0.860 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
82. cers6 ENSDARG00000053583 247 1.692 0.814 - - - - - 0.878 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
83. cdk5r1b ENSDARG00000045087 2075 1.69 0.777 - - - - - 0.913 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
84. TUSC5 TUSC5 1436 1.688 0.833 - - - - - 0.855 - -
85. stmn2a ENSDARG00000033234 2272 1.683 0.830 - - - - - 0.853 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
86. JAKMIP1 ENSDARG00000076090 55 1.681 - - - - - 0.910 0.771 - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
87. NPTXR NPTXR 241 1.68 - - - - - 0.807 0.873 - -
88. IGLON5 ENSDARG00000022176 1353 1.679 - - - - - 0.922 0.757 - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
89. rab3ab ENSDARG00000043835 1267 1.678 0.777 - - - - - 0.901 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
90. pou4f2 ENSDARG00000069737 451 1.676 - - - - - 0.836 0.840 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
91. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.675 0.812 - - - - - 0.863 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
92. prrt1 ENSDARG00000062208 368 1.675 0.819 - - - - - 0.856 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
93. si:dkeyp-69c1.7 ENSDARG00000087165 31 1.674 0.872 - - - - - 0.802 - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
94. sall3b ENSDARG00000057586 982 1.674 - - - - - 0.757 0.917 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
95. bhlhe22 ENSDARG00000058039 1673 1.673 0.798 - - - - - 0.875 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
96. erbb4a ENSDARG00000063207 55 1.672 - - - - - 0.870 0.802 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
97. stmn4l ENSDARG00000043932 654 1.672 0.819 - - - - - 0.853 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
98. slc8a4a ENSDARG00000055154 90 1.671 0.895 - - - - - 0.776 - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
99. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.671 0.875 - - - - - 0.796 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
100. dnm1a ENSDARG00000010042 43 1.671 - - - - - 0.869 0.802 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]

There are 1618 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA