Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PDGFB

Gene Name Gene ID Reads Annotation
PDGFB PDGFB 259










Genes with expression patterns similar to PDGFB

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PDGFB PDGFB 259 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. C8H9orf172 C8H9orf172 113 2.332 - 0.801 - 0.823 - 0.708 - - -
3. si:dkey-192g7.3 ENSDARG00000094012 105 1.731 - - - 0.862 - - - 0.869 - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
4. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 1.675 0.838 - - - - - - 0.837 - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
5. BX571949.1 BX571949.1 293 1.665 - - - - - 0.796 - 0.869 -
6. hsp70l_1 ENSDARG00000055723 72 1.645 - 0.739 - 0.906 - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
7. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 1.632 - - - 0.751 - - - 0.881 - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
8. pear1 ENSDARG00000060753 173 1.617 - 0.853 - 0.764 - - - - - platelet endothelial aggregation receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091230-1]
9. klhl42 ENSDARG00000006011 46 1.598 - 0.739 - - - - - 0.859 - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
10. fgf10a ENSDARG00000030932, ENSDARG00000116867 205 1.598 - - - - - - - 0.836 0.762 fibroblast growth factor 10a [Source:ZFIN;Acc:ZDB-GENE-030715-1]
11. gpr126 gpr126 51 1.591 - - - - - - - 0.847 0.744
12. olfm1a ENSDARG00000018270 107 1.587 - 0.739 - 0.848 - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
13. C7H11orf68 C7H11orf68 446 1.583 0.737 - - 0.846 - - - - -
14. fam43b ENSDARG00000070222 92 1.583 - 0.739 - 0.844 - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
15. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.573 - 0.739 - - - 0.834 - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
16. gstz1 ENSDARG00000027984 278 1.561 - - - 0.790 - - - 0.771 - glutathione S-transferase zeta 1 [Source:ZFIN;Acc:ZDB-GENE-040718-184]
17. pycr1 pycr1 1258 1.559 - 0.739 - - - - - 0.820 -
18. C12H17orf62_1 C12H17orf62_1 83 1.557 - - - 0.831 - - - 0.726 -
19. med30 ENSDARG00000101115 133 1.557 0.732 - - - - - - 0.825 - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
20. si:dkey-88j15.5 si:dkey-88j15.5 48 1.552 0.818 - - - - - - - 0.734
21. VSTM2B VSTM2B 149 1.543 - 0.725 - 0.818 - - - - -
22. jmjd7 ENSDARG00000035546 222 1.538 0.716 - - 0.822 - - - - - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
23. srprb ENSDARG00000030949 1670 1.535 - - - - - - - 0.830 0.705 SRP receptor subunit beta [Source:ZFIN;Acc:ZDB-GENE-040718-311]
24. valopa ENSDARG00000021150 71 1.523 - 0.801 - - - 0.722 - - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
25. FBXO40_1 FBXO40_1 59 1.521 0.782 0.739 - - - - - - -
26. avpr1b avpr1b 58 1.518 0.762 0.756 - - - - - - -
27. bmp6 ENSDARG00000015686 211 1.517 - - - 0.790 - - - - 0.727 bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
28. arl15a ENSDARG00000076040, ENSDARG00000114295 41 1.502 - - 0.750 - - - - - 0.752 ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
29. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1.491 - - 0.731 - - - - 0.760 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
30. SEMA5B SEMA5B 1316 1.471 - - - 0.723 - - - - 0.748
31. zgc:162184 ENSDARG00000077217 47 1.465 - - 0.707 - - - - - 0.758 zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
32. pex16 ENSDARG00000058202 486 1.457 - - 0.738 - - - - - 0.719 peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
33. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1.453 - 0.739 0.714 - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
34. marveld2a ENSDARG00000025076 917 1.452 - - - 0.720 - - - - 0.732 MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
35. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 1.447 - - 0.710 - - - - - 0.737 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
36. SDR42E2 ENSDARG00000059914 132 0.966 0.966 - - - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
37. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.95 - - - - - - 0.950 - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
38. lypla1 ENSDARG00000104228 185 0.949 0.949 - - - - - - - - lysophospholipase I [Source:ZFIN;Acc:ZDB-GENE-050417-87]
39. RILP ENSDARG00000074660 249 0.948 0.948 - - - - - - - - Rab interacting lysosomal protein [Source:ZFIN;Acc:ZDB-GENE-100408-4]
40. rom1b ENSDARG00000026926 4 0.942 0.942 - - - - - - - - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
41. BX511270.1 BX511270.1 25 0.942 0.942 - - - - - - - -
42. eng2b eng2b 865 0.92 - 0.920 - - - - - - -
43. zgc:174623 37 0.918 - 0.918 - - - - - - - zgc:174623, transcript variant X1
44. C21H18orf54 C21H18orf54 174 0.917 - 0.917 - - - - - - -
45. sp5l ENSDARG00000115868 361 0.914 - - - - - - - 0.914 - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
46. lrrcc1 ENSDARG00000078535 118 0.908 - - - 0.908 - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
47. ftsjd1 ftsjd1 137 0.908 - - - 0.908 - - - - -
48. nr0b1 ENSDARG00000056541 35 0.905 - - - - - - - 0.905 - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
49. si:ch211-251f6.7 ENSDARG00000091558 25 0.903 - - - - - - - 0.903 - si:ch211-251f6.7 [Source:ZFIN;Acc:ZDB-GENE-091113-57]
50. si:dkey-97a13.12 ENSDARG00000095649 14 0.902 - - - - - - - 0.902 - si:dkey-97a13.12 [Source:ZFIN;Acc:ZDB-GENE-070912-614]
51. C7H10orf112 C7H10orf112 15 0.902 - - - - - - - 0.902 -
52. flh flh 47 0.902 - - - - - - - 0.902 -
53. mfsd9 ENSDARG00000074728 6 0.902 - - - - - - - 0.902 - major facilitator superfamily domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070912-190]
54. si:dkey-65b12.13 si:dkey-65b12.13 7 0.902 - - - - - - - 0.902 -
55. guca1a ENSDARG00000010454 9 0.902 - - - - - - - 0.902 - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
56. si:dkey-111k7.2 si:dkey-111k7.2 7 0.901 - - - - - - - 0.901 -
57. mctp1b ENSDARG00000060871 20 0.899 - - - - - - - 0.899 - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
58. si:ch73-112l6.5 si:ch73-112l6.5 6 0.898 - - - - - - - 0.898 -
59. HYAL4 ENSDARG00000051823 67 0.897 - - - - - - - 0.897 - hyaluronoglucosaminidase 4 [Source:ZFIN;Acc:ZDB-GENE-061220-9]
60. CCSER1 ENSDARG00000075919 16 0.897 - - - - - - - 0.897 - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
61. si:ch211-176m18.1 si:ch211-176m18.1 27 0.895 - - - - - - - 0.895 -
62. ALPK1 195 0.895 - - - - - - 0.895 - - alpha-kinase 1
63. lrrc23 ENSDARG00000006174 234 0.893 - - - - - - - 0.893 - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
64. DCHS1 DCHS1 209 0.893 - - - - - - - 0.893 -
65. PCOLCE PCOLCE 25 0.893 - - - - - - - 0.893 -
66. lox lox 7 0.893 - - - - - - - 0.893 -
67. aqp8b_1 ENSDARG00000089749 586 0.893 0.893 - - - - - - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
68. CU183952.1 CU183952.1 32 0.892 - - - - - - - 0.892 -
69. gpr39 ENSDARG00000102888 46 0.891 - - - - - - - 0.891 - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
70. pald1b ENSDARG00000039352 66 0.89 - - - - - - - 0.890 - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
71. ccna1 ENSDARG00000043236 13 0.89 - - - - - - - 0.890 - cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-040311-2]
72. efcab2 ENSDARG00000074323 88 0.889 - - - - - - - 0.889 - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
73. ankmy1 ENSDARG00000062702 52 0.888 - - - - - - - 0.888 - ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
74. e2f5 ENSDARG00000038812 388 0.888 - - - - - - - 0.888 - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
75. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 0.887 - - - 0.887 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
76. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 0.885 - - - - - - - 0.885 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
77. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 0.885 - - - - - - - 0.885 - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
78. pum2 ENSDARG00000061040 207 0.885 - - - 0.885 - - - - - pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]
79. derl2 ENSDARG00000042401 863 0.885 - - - - - - - 0.885 - derlin 2 [Source:ZFIN;Acc:ZDB-GENE-050522-90]
80. zgc:92218 zgc:92218 64 0.884 - - - - - - - 0.884 -
81. si:dkey-251i10.2 ENSDARG00000093957 4424 0.883 - 0.883 - - - - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
82. slc12a7a ENSDARG00000073756 170 0.883 0.883 - - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-070912-696]
83. ift140 ENSDARG00000031886 573 0.883 - - - - - - - 0.883 - intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]
84. rpph1 33 0.882 - - - - - - - 0.882 - ribonuclease P RNA component H1
85. dnaaf3 ENSDARG00000092662 20 0.882 - - - - - - - 0.882 - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
86. si:dkey-285e18.8 si:dkey-285e18.8 170 0.881 0.881 - - - - - - - -
87. znf704 ENSDARG00000061718, ENSDARG00000115892 160 0.88 0.880 - - - - - - - - zinc finger protein 704 [Source:ZFIN;Acc:ZDB-GENE-060503-775]
88. CU683898.1 CU683898.1 203 0.878 - - - - - - - 0.878 -
89. DIP2C DIP2C 222 0.878 0.878 - - - - - - - -
90. ubox5 ENSDARG00000058563 161 0.878 - - - 0.878 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
91. diaph3 ENSDARG00000090785 16 0.877 - - - - - - - 0.877 - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
92. pou5f3 ENSDARG00000044774 212 0.877 - - - - - - - 0.877 - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
93. NOTUM NOTUM 232 0.876 - - - - - - - 0.876 -
94. tlr5b ENSDARG00000052322 86 0.876 - - - - - - - 0.876 - toll-like receptor 5b [Source:ZFIN;Acc:ZDB-GENE-040219-15]
95. gmcl1 ENSDARG00000020948 261 0.876 - - - 0.876 - - - - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
96. ARX ARX 71 0.874 - - - 0.874 - - - - -
97. map3k3 ENSDARG00000060348 1482 0.874 - - - 0.874 - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
98. CABZ01100187.1 CABZ01100187.1 191 0.873 - - - - - - - 0.873 -
99. uo:ion006 uo:ion006 56 0.873 - - - - - - - 0.873 -
100. tekt2 ENSDARG00000028973 160 0.873 - - - - - - - 0.873 - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA