Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MTRF1

Gene Name Gene ID Reads Annotation
MTRF1 ENSDARG00000033579 107 mitochondrial translational release factor 1 [Source:ZFIN;Acc:ZDB-GENE-050220-8]










Genes with expression patterns similar to MTRF1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MTRF1 ENSDARG00000033579 107 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial translational release factor 1 [Source:ZFIN;Acc:ZDB-GENE-050220-8]
2. C22H1orf53 C22H1orf53 24 1.754 - 0.903 - - - - 0.851 - -
3. gtf3c3 ENSDARG00000043247 202 1.64 0.806 0.834 - - - - - - - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
4. C8H1orf194 C8H1orf194 111 1.604 - 0.883 - - - - 0.721 - -
5. KLHL24 KLHL24 268 1.595 0.779 - - - - 0.816 - - -
6. rorcb ENSDARG00000017780 233 1.574 - 0.754 - - - 0.820 - - - RAR-related orphan receptor C b [Source:ZFIN;Acc:ZDB-GENE-040724-215]
7. ucn3l ENSDARG00000087241 29 0.98 - 0.980 - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
8. irx1a ENSDARG00000101831 644 0.96 - - - - - - 0.960 - - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
9. cdk5r2b ENSDARG00000078671 20 0.96 0.960 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
10. mak ENSDARG00000059287 144 0.955 - - - - - - 0.955 - - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
11. C13H4orf32 C13H4orf32 174 0.954 - 0.954 - - - - - - -
12. slc9a8 ENSDARG00000020699 206 0.948 - - - - - 0.948 - - - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
13. trim35-1 ENSDARG00000052037 43 0.947 - 0.947 - - - - - - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
14. mfsd12a ENSDARG00000061908 68 0.946 0.946 - - - - - - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
15. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 0.944 - - - - - - 0.944 - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
16. pttg1 ENSDARG00000075421 166 0.935 - - - - - 0.935 - - - pituitary tumor-transforming 1 [Source:ZFIN;Acc:ZDB-GENE-081104-345]
17. asb4 ENSDARG00000034988 1115 0.934 - 0.934 - - - - - - - ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
18. pou2f3 ENSDARG00000052387 103 0.93 - 0.930 - - - - - - - POU class 2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-060512-299]
19. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 0.928 - 0.928 - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
20. znf692 ENSDARG00000078434 137 0.927 - 0.927 - - - - - - - zinc finger protein 692 [Source:ZFIN;Acc:ZDB-GENE-081104-484]
21. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 0.927 - - - - - 0.927 - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
22. fgf3 ENSDARG00000101540 75 0.926 - 0.926 - - - - - - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
23. fbxo32 ENSDARG00000040277 93 0.924 - - - - - 0.924 - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
24. acta2 ENSDARG00000045180 96 0.924 - - - - - 0.924 - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
25. cacnb4a ENSDARG00000009738 28 0.924 - - - - - 0.924 - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
26. ENSDARG00000089986 ENSDARG00000089986 308 0.924 - 0.924 - - - - - - -
27. FAM177B 9 0.924 - - - - - 0.924 - - - family with sequence similarity 177 member B
28. wnt3a ENSDARG00000058822 5 0.923 - 0.923 - - - - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
29. hcn4l ENSDARG00000074419 46 0.923 - 0.923 - - - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
30. nphp4 ENSDARG00000069014 77 0.923 - - - - - - 0.923 - - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
31. zgc:174700 zgc:174700 35 0.923 - 0.923 - - - - - - -
32. mb ENSDARG00000031952 351 0.922 - 0.922 - - - - - - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
33. fam110b ENSDARG00000088073 420 0.921 - 0.921 - - - - - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
34. nxph2a ENSDARG00000063224 75 0.919 - - - - - 0.919 - - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
35. si:dkey-8o9.5 si:dkey-8o9.5 6 0.914 - 0.914 - - - - - - -
36. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 0.914 - 0.914 - - - - - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
37. CACNG4 CACNG4 123 0.914 - 0.914 - - - - - - -
38. dennd2db ENSDARG00000030250 24 0.914 - 0.914 - - - - - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
39. cttn ENSDARG00000011777 19 0.914 - 0.914 - - - - - - - cortactin [Source:ZFIN;Acc:ZDB-GENE-040715-3]
40. tpi1a ENSDARG00000025012 562 0.914 - - - - - - 0.914 - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
41. CU929133.1 CU929133.1 94 0.914 - 0.914 - - - - - - -
42. si:dkey-267k7.4 si:dkey-267k7.4 111 0.913 - 0.913 - - - - - - -
43. satb2 ENSDARG00000061885 6 0.911 - 0.911 - - - - - - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
44. tysnd1 ENSDARG00000074895 85 0.907 0.907 - - - - - - - - trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
45. tfcp2l1 ENSDARG00000029497 34 0.907 0.907 - - - - - - - - transcription factor CP2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040704-58]
46. csnk1g1 ENSDARG00000104342 57 0.907 0.907 - - - - - - - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
47. si:dkey-21e13.3 ENSDARG00000096701 8 0.907 0.907 - - - - - - - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
48. slc12a7a ENSDARG00000073756 170 0.907 - - - - - 0.907 - - - solute carrier family 12 (potassium/chloride transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-070912-696]
49. BCL2L12 BCL2L12 327 0.906 - - - - - 0.906 - - -
50. rdh12l ENSDARG00000045277 139 0.905 0.905 - - - - - - - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
51. SYNGAP1_1 SYNGAP1_1 66 0.903 - 0.903 - - - - - - -
52. C11H3orf83 C11H3orf83 30 0.903 - 0.903 - - - - - - -
53. si:dkey-208a9.1 si:dkey-208a9.1 3 0.903 - 0.903 - - - - - - -
54. CKMT2 CKMT2 10 0.903 - 0.903 - - - - - - -
55. si:dkey-77p23.2 si:dkey-77p23.2 22 0.903 - 0.903 - - - - - - -
56. cyp4f3 ENSDARG00000053530 10 0.903 - 0.903 - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
57. si:dkey-54f18.2 si:dkey-54f18.2 27 0.903 - 0.903 - - - - - - -
58. mpg ENSDARG00000069729 43 0.903 - 0.903 - - - - - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
59. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 0.903 - 0.903 - - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
60. angptl2a ENSDARG00000024030 8 0.903 - 0.903 - - - - - - - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
61. zgc:77880 ENSDARG00000030563 208 0.903 - 0.903 - - - - - - - zgc:77880 [Source:ZFIN;Acc:ZDB-GENE-040426-1901]
62. Metazoa_SRP Metazoa_SRP 1 0.903 - 0.903 - - - - - - -
63. taf4b ENSDARG00000075732 3 0.903 - 0.903 - - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
64. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 0.903 - 0.903 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
65. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 0.903 - 0.903 - - - - - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
66. vav3a ENSDARG00000086623 498 0.903 - 0.903 - - - - - - - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
67. si:ch211-274k16.4 si:ch211-274k16.4 6 0.903 - 0.903 - - - - - - -
68. si:dkey-20i20.11 ENSDARG00000101885 17 0.903 - 0.903 - - - - - - - si:dkey-20i20.11 [Source:ZFIN;Acc:ZDB-GENE-060503-58]
69. zbtb14 ENSDARG00000098273 36 0.903 - 0.903 - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
70. si:dkey-199m13.3 si:dkey-199m13.3 2 0.903 - 0.903 - - - - - - -
71. chd3 ENSDARG00000021405, ENSDARG00000115235 17 0.903 - 0.903 - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
72. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 0.903 - 0.903 - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
73. mxc ENSDARG00000024789 68 0.903 - 0.903 - - - - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
74. NLRP1 NLRP1 54 0.903 - 0.903 - - - - - - -
75. chrm4a ENSDARG00000069254 32 0.903 - 0.903 - - - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
76. drd4a ENSDARG00000038363 82 0.903 - 0.903 - - - - - - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
77. ngfrb ENSDARG00000089223, ENSDARG00000115390 41 0.903 - 0.903 - - - - - - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
78. CABZ01060296.1 CABZ01060296.1 9 0.903 - 0.903 - - - - - - -
79. ccdc136b_1 ENSDARG00000057921, ENSDARG00000075513 3 0.903 - 0.903 - - - - - - - coiled-coil domain containing 136b [Source:ZFIN;Acc:ZDB-GENE-081104-244]
80. DPYD DPYD 52 0.903 - 0.903 - - - - - - -
81. tmem232 ENSDARG00000067646 4 0.903 - 0.903 - - - - - - - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
82. hsd17b7_1 ENSDARG00000088140 36 0.903 - 0.903 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
83. CR391924.1 CR391924.1 5 0.903 - 0.903 - - - - - - -
84. crhb ENSDARG00000027657 9 0.903 - 0.903 - - - - - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
85. fbxl8 ENSDARG00000054222 3 0.903 - 0.903 - - - - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
86. ZNF337_24 ZNF337_24 16 0.903 - 0.903 - - - - - - -
87. slc17a9a ENSDARG00000042954 36 0.903 - 0.903 - - - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
88. zgc:73228 zgc:73228 97 0.903 - 0.903 - - - - - - -
89. oprd1b ENSDARG00000037159 21 0.903 - 0.903 - - - - - - - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
90. nadka ENSDARG00000006577, ENSDARG00000098313 5 0.903 - 0.903 - - - - - - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
91. APOH APOH 2 0.903 - 0.903 - - - - - - -
92. pxmp2 ENSDARG00000003144 50 0.903 - 0.903 - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
93. si:dkey-91i10.2 ENSDARG00000074034 334 0.903 - 0.903 - - - - - - - si:dkey-91i10.2 [Source:ZFIN;Acc:ZDB-GENE-050208-441]
94. si:ch211-113a14.17 15 0.903 - 0.903 - - - - - - - si:ch211-113a14.17
95. htr5al htr5al 6 0.903 - 0.903 - - - - - - -
96. SLC47A1_2 SLC47A1_2 50 0.903 - 0.903 - - - - - - -
97. si:dkey-45d16.4 72 0.903 - 0.903 - - - - - - - si:dkey-45d16.4
98. si:ch211-262n1.5 12 0.903 - 0.903 - - - - - - - si:ch211-262n1.5
99. tnfrsfa ENSDARG00000004451 4 0.903 - 0.903 - - - - - - - tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
100. si:ch211-105d18.7 si:ch211-105d18.7 6 0.903 - 0.903 - - - - - - -

There are 577 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA