Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MTRF1

Gene Name Gene ID Reads Annotation
MTRF1 ENSDARG00000033579 107 mitochondrial translational release factor 1 [Source:ZFIN;Acc:ZDB-GENE-050220-8]










Genes with expression patterns similar to MTRF1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MTRF1 ENSDARG00000033579 107 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial translational release factor 1 [Source:ZFIN;Acc:ZDB-GENE-050220-8]
2. C22H1orf53 C22H1orf53 24 1.754 - 0.903 - - - - 0.851 - -
3. gtf3c3 ENSDARG00000043247 202 1.64 0.806 0.834 - - - - - - - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
4. C8H1orf194 C8H1orf194 111 1.604 - 0.883 - - - - 0.721 - -
5. KLHL24 KLHL24 268 1.595 0.779 - - - - 0.816 - - -
6. rorcb ENSDARG00000017780 233 1.574 - 0.754 - - - 0.820 - - - RAR-related orphan receptor C b [Source:ZFIN;Acc:ZDB-GENE-040724-215]
7. ucn3l ENSDARG00000087241 29 0.98 - 0.980 - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
8. cdk5r2b ENSDARG00000078671 20 0.96 0.960 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
9. irx1a ENSDARG00000101831 644 0.96 - - - - - - 0.960 - - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
10. mak ENSDARG00000059287 144 0.955 - - - - - - 0.955 - - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
11. C13H4orf32 C13H4orf32 174 0.954 - 0.954 - - - - - - -
12. slc9a8 ENSDARG00000020699 206 0.948 - - - - - 0.948 - - - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
13. trim35-1 ENSDARG00000052037 43 0.947 - 0.947 - - - - - - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
14. mfsd12a ENSDARG00000061908 68 0.946 0.946 - - - - - - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
15. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 0.944 - - - - - - 0.944 - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
16. pttg1 ENSDARG00000075421 166 0.935 - - - - - 0.935 - - - pituitary tumor-transforming 1 [Source:ZFIN;Acc:ZDB-GENE-081104-345]
17. asb4 ENSDARG00000034988 1115 0.934 - 0.934 - - - - - - - ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
18. pou2f3 ENSDARG00000052387 103 0.93 - 0.930 - - - - - - - POU class 2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-060512-299]
19. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 0.928 - 0.928 - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
20. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 0.927 - - - - - 0.927 - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
21. znf692 ENSDARG00000078434 137 0.927 - 0.927 - - - - - - - zinc finger protein 692 [Source:ZFIN;Acc:ZDB-GENE-081104-484]
22. fgf3 ENSDARG00000101540 75 0.926 - 0.926 - - - - - - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
23. FAM177B 9 0.924 - - - - - 0.924 - - - family with sequence similarity 177 member B
24. ENSDARG00000089986 ENSDARG00000089986 308 0.924 - 0.924 - - - - - - -
25. cacnb4a ENSDARG00000009738 28 0.924 - - - - - 0.924 - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
26. acta2 ENSDARG00000045180 96 0.924 - - - - - 0.924 - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
27. fbxo32 ENSDARG00000040277 93 0.924 - - - - - 0.924 - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
28. zgc:174700 zgc:174700 35 0.923 - 0.923 - - - - - - -
29. nphp4 ENSDARG00000069014 77 0.923 - - - - - - 0.923 - - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
30. hcn4l ENSDARG00000074419 46 0.923 - 0.923 - - - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
31. wnt3a ENSDARG00000058822 5 0.923 - 0.923 - - - - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
32. mb ENSDARG00000031952 351 0.922 - 0.922 - - - - - - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
33. fam110b ENSDARG00000088073 420 0.921 - 0.921 - - - - - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
34. nxph2a ENSDARG00000063224 75 0.919 - - - - - 0.919 - - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
35. CU929133.1 CU929133.1 94 0.914 - 0.914 - - - - - - -
36. tpi1a ENSDARG00000025012 562 0.914 - - - - - - 0.914 - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
37. cttn ENSDARG00000011777 19 0.914 - 0.914 - - - - - - - cortactin [Source:ZFIN;Acc:ZDB-GENE-040715-3]
38. dennd2db ENSDARG00000030250 24 0.914 - 0.914 - - - - - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
39. CACNG4 CACNG4 123 0.914 - 0.914 - - - - - - -
40. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 0.914 - 0.914 - - - - - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
41. si:dkey-8o9.5 si:dkey-8o9.5 6 0.914 - 0.914 - - - - - - -
42. si:dkey-267k7.4 si:dkey-267k7.4 111 0.913 - 0.913 - - - - - - -
43. satb2 ENSDARG00000061885 6 0.911 - 0.911 - - - - - - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
44. slc12a7a ENSDARG00000073756 170 0.907 - - - - - 0.907 - - - solute carrier family 12 (potassium/chloride transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-070912-696]
45. si:dkey-21e13.3 ENSDARG00000096701 8 0.907 0.907 - - - - - - - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
46. csnk1g1 ENSDARG00000104342 57 0.907 0.907 - - - - - - - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
47. tfcp2l1 ENSDARG00000029497 34 0.907 0.907 - - - - - - - - transcription factor CP2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040704-58]
48. tysnd1 ENSDARG00000074895 85 0.907 0.907 - - - - - - - - trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
49. BCL2L12 BCL2L12 327 0.906 - - - - - 0.906 - - -
50. rdh12l ENSDARG00000045277 139 0.905 0.905 - - - - - - - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
51. angptl6 ENSDARG00000020265 273 0.903 - 0.903 - - - - - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
52. zar1 ENSDARG00000019706 8 0.903 - 0.903 - - - - - - - zygote arrest 1 [Source:ZFIN;Acc:ZDB-GENE-030818-1]
53. KBTBD3 ENSDARG00000060512 42 0.903 - 0.903 - - - - - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
54. si:dkey-228l14.2 si:dkey-228l14.2 1 0.903 - 0.903 - - - - - - -
55. ARID5B ENSDARG00000037196 165 0.903 - 0.903 - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
56. LPL ENSDARG00000087697 18 0.903 - 0.903 - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
57. si:ch1073-15f19.2 ENSDARG00000095640 4 0.903 - 0.903 - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
58. BX664622.3 BX664622.3 42 0.903 - 0.903 - - - - - - -
59. AKNA ENSDARG00000087110 39 0.903 - 0.903 - - - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
60. si:ch73-389b16.2 ENSDARG00000103802 340 0.903 - 0.903 - - - - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
61. FGFBP1 FGFBP1 7 0.903 - 0.903 - - - - - - -
62. cabp2b ENSDARG00000052277 119 0.903 - 0.903 - - - - - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
63. cx52.9 ENSDARG00000086453 7 0.903 - 0.903 - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
64. PEG3_27 PEG3_27 10 0.903 - 0.903 - - - - - - -
65. dnase2 ENSDARG00000073893 141 0.903 - 0.903 - - - - - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
66. OLFM4 OLFM4 6 0.903 - 0.903 - - - - - - -
67. cdadc1 ENSDARG00000036650 16 0.903 - 0.903 - - - - - - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
68. ENSDARG00000089996 ENSDARG00000089996 17 0.903 - 0.903 - - - - - - -
69. grk1a ENSDARG00000058803 13 0.903 - 0.903 - - - - - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
70. gcgb ENSDARG00000040907 182 0.903 - 0.903 - - - - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
71. dym ENSDARG00000042555 1 0.903 - 0.903 - - - - - - - dymeclin [Source:ZFIN;Acc:ZDB-GENE-091204-348]
72. CCDC180 ENSDARG00000032372 21 0.903 - 0.903 - - - - - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
73. CR762486.1 CR762486.1 2 0.903 - 0.903 - - - - - - -
74. si:dkey-61f9.2 2 0.903 - 0.903 - - - - - - - si:dkey-61f9.2
75. CABZ01081747.2 CABZ01081747.2 9 0.903 - 0.903 - - - - - - -
76. si:dkeyp-98a7.1 100 0.903 - 0.903 - - - - - - - si:dkeyp-98a7.1
77. BX682234.1 ENSDARG00000074732 5 0.903 - 0.903 - - - - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
78. RBM33_1 RBM33_1 7 0.903 - 0.903 - - - - - - -
79. rps8b ENSDARG00000057368 68 0.903 - 0.903 - - - - - - - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
80. AL935186.2 ENSDARG00000097345 6 0.903 - 0.903 - - - - - - -
81. PLA2R1 ENSDARG00000077474 45 0.903 - 0.903 - - - - - - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
82. si:dkey-47k16.4 ENSDARG00000113005 87 0.903 - 0.903 - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
83. CABZ01044346.1 CABZ01044346.1 12 0.903 - 0.903 - - - - - - -
84. coch ENSDARG00000024032 7 0.903 - 0.903 - - - - - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
85. si:ch211-224b1.4 si:ch211-224b1.4 29 0.903 - 0.903 - - - - - - -
86. prox1b ENSDARG00000088810, ENSDARG00000113014 33 0.903 - 0.903 - - - - - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
87. 5_8S_rRNA 5_8S_rRNA 24 0.903 - 0.903 - - - - - - -
88. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 0.903 - 0.903 - - - - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
89. twf2b ENSDARG00000009727, ENSDARG00000112161 49 0.903 - 0.903 - - - - - - - twinfilin actin-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-050522-238]
90. si:dkey-257e4.5 si:dkey-257e4.5 3 0.903 - 0.903 - - - - - - -
91. si:ch211-197g22.1 si:ch211-197g22.1 1 0.903 - 0.903 - - - - - - -
92. CR790368.1 ENSDARG00000100936 20 0.903 - 0.903 - - - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
93. PEG3_10 PEG3_10 45 0.903 - 0.903 - - - - - - -
94. si:dkey-259p7.1 si:dkey-259p7.1 59 0.903 - 0.903 - - - - - - -
95. ddit4 ENSDARG00000037618 37 0.903 - 0.903 - - - - - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
96. si:ch73-289h5.3 si:ch73-289h5.3 9 0.903 - 0.903 - - - - - - -
97. si:ch211-262n1.5 12 0.903 - 0.903 - - - - - - - si:ch211-262n1.5
98. si:dkey-45d16.4 72 0.903 - 0.903 - - - - - - - si:dkey-45d16.4
99. nup85 ENSDARG00000098679 2 0.903 - 0.903 - - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
100. si:ch211-105d18.7 si:ch211-105d18.7 6 0.903 - 0.903 - - - - - - -

There are 577 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA