Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LRTM1

Gene Name Gene ID Reads Annotation
LRTM1 ENSDARG00000098742 21 leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]










Genes with expression patterns similar to LRTM1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRTM1 ENSDARG00000098742 21 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
2. zgc:162184 ENSDARG00000077217 47 2.64 - - 0.974 - - 0.888 0.778 - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
3. CABZ01054965.1 ENSDARG00000090844 74 2.464 - - - - 0.892 0.812 0.760 - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
4. TRIM14_5 TRIM14_5 2 2 - - - - - 1.000 1.000 - -
5. si:ch211-220i18.4 ENSDARG00000030262 10 2 - 1.000 - - - - 1.000 - - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
6. si:dkey-14o1.18 si:dkey-14o1.18 23 2 - 1.000 - - - 1.000 - - -
7. si:dkeyp-87a6.2 ENSDARG00000093322 18 2 - - - - - 1.000 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
8. si:dkey-253d23.8 ENSDARG00000094427 26 1.986 - - - - 0.986 - 1.000 - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
9. U6_18 U6_18 12 1.986 - - - - 0.986 - 1.000 - -
10. lyve1b ENSDARG00000062483 14 1.971 - - - - 0.971 - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
11. vps13d ENSDARG00000017986 183 1.943 - 1.000 0.943 - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
12. CLEC17A CLEC17A 42 1.909 - - 0.998 - - 0.911 - - -
13. BX511006.2 BX511006.2 29 1.906 - - 0.911 - 0.995 - - - -
14. CABZ01071909.3 CABZ01071909.3 14 1.903 - 0.903 - - - 1.000 - - -
15. BX511266.1 BX511266.1 21 1.903 - 0.903 - - - - 1.000 - -
16. cd247l ENSDARG00000077240 25 1.903 - 0.903 - - - 1.000 - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
17. myo7ab ENSDARG00000044632 1 1.903 - 0.903 - - - 1.000 - - - myosin VIIAb [Source:ZFIN;Acc:ZDB-GENE-091110-4]
18. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1.903 - 0.903 - - - 1.000 - - -
19. IQCG ENSDARG00000068678 77 1.886 - - 0.886 - - - 1.000 - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
20. FOXO6_1 FOXO6_1 73 1.868 - - - - - 0.868 1.000 - -
21. muc13b ENSDARG00000079647 67 1.861 - - - - - 1.000 0.861 - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
22. si:dkeyp-4f2.2 si:dkeyp-4f2.2 53 1.836 - 0.903 0.933 - - - - - -
23. GMNC ENSDARG00000068719 28 1.825 - 0.825 - - - - 1.000 - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
24. si:ch211-196f5.2 ENSDARG00000041492 29 1.818 - - - - 0.996 0.822 - - - si:ch211-196f5.2 [Source:ZFIN;Acc:ZDB-GENE-041014-306]
25. MUC5AC_1 MUC5AC_1 381 1.799 - 0.903 - - 0.896 - - - -
26. si:dkey-66g10.2 ENSDARG00000092845 28 1.792 - 0.792 - - - - 1.000 - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
27. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1.792 - 0.792 - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
28. SYNGAP1 SYNGAP1 4 1.787 - 0.903 - - - 0.884 - - -
29. gc3 31 1.787 - 0.903 - - - 0.884 - - - guanylyl cyclase 3, transcript variant X2
30. grapa ENSDARG00000005414 29 1.787 - - - 0.787 - - 1.000 - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
31. si:dkey-1d7.3 ENSDARG00000075837 18 1.779 - 0.903 - - - - 0.876 - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
32. edil3 edil3 24 1.777 - 0.903 0.874 - - - - - -
33. rpap3 ENSDARG00000087962 22 1.771 - 0.903 0.868 - - - - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
34. si:ch211-26b3.4 ENSDARG00000075491 50 1.765 - 0.903 0.862 - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
35. SIRT4 ENSDARG00000010415 118 1.746 - - - - - 0.746 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
36. si:dkey-163m14.7 65 1.741 - 0.903 0.838 - - - - - - si:dkey-163m14.7
37. si:ch211-203k16.3 ENSDARG00000069305 21 1.74 - - - - - 1.000 - 0.740 - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
38. cx45.6 cx45.6 26 1.739 - - - - 0.739 1.000 - - -
39. sema3h ENSDARG00000042616 75 1.737 - - - - - 0.737 1.000 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
40. si:dkey-29b11.3 ENSDARG00000087388 29 1.724 - - 0.979 - - - 0.745 - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
41. BX323793.1 ENSDARG00000104134 24 1.722 - 0.722 - - - 1.000 - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
42. si:ch211-105d18.8 si:ch211-105d18.8 38 1.714 - - 0.999 - - 0.715 - - -
43. si:dkey-114e9.1 si:dkey-114e9.1 233 1.711 - - - - - - 1.000 0.711 -
44. C25HXorf38_1 C25HXorf38_1 35 1.71 - 0.869 - - 0.841 - - - -
45. si:dkey-276l13.3 si:dkey-276l13.3 8 1.709 - - - 0.709 - - 1.000 - -
46. CU633991.1 CU633991.1 16 1.705 - 0.705 - - - - 1.000 - -
47. fam26f 595 1.702 - - 0.994 - - 0.708 - - - family with sequence similarity 26, member F
48. ANGEL1 ENSDARG00000077567 38 1.701 - 0.807 0.894 - - - - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
49. si:ch211-210h11.7 si:ch211-210h11.7 32 1.685 - - - - 0.965 - 0.720 - -
50. kif6 ENSDARG00000053240 75 1.651 - - - - - 0.785 0.866 - - kinesin family member 6 [Source:ZFIN;Acc:ZDB-GENE-061027-130]
51. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 1.65 - - - - 0.930 - 0.720 - -
52. si:dkey-220o21.2 si:dkey-220o21.2 19 1.648 - 0.903 - - - - 0.745 - -
53. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1.64 - 0.903 - - - 0.737 - - -
54. hsd11b2 ENSDARG00000001975 245 1.635 - 0.764 - - - - 0.871 - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
55. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1.632 - - - 0.911 - - - 0.721 -
56. si:ch211-274p24.4 ENSDARG00000087088 36 1.627 - 0.783 - - - - 0.844 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
57. ccbl2 4 1.611 - 0.796 - 0.815 - - - - - cysteine conjugate-beta lyase 2, transcript variant X4
58. CABZ01117079.1 CABZ01117079.1 123 1.602 - - 0.729 - - - 0.873 - -
59. spp1 ENSDARG00000044276 34 1.583 - - 0.727 - - 0.856 - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
60. arl15a ENSDARG00000076040, ENSDARG00000114295 41 1.553 - - 0.842 - 0.711 - - - - ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
61. CU694315.1 CU694315.1 87 1.539 - - 0.786 - 0.753 - - - -
62. ccny ENSDARG00000063677 66 1.534 - 0.800 - - - 0.734 - - - cyclin Y [Source:ZFIN;Acc:ZDB-GENE-091117-45]
63. si:dkey-12e7.1 ENSDARG00000069328, ENSDARG00000109272 239 1.529 - - - - 0.750 - 0.779 - - si:dkey-12e7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-173]
64. gra ENSDARG00000078754 76 1.521 - 0.770 - - - 0.751 - - - granulito [Source:ZFIN;Acc:ZDB-GENE-081022-203]
65. zgc:174696 ENSDARG00000110658 67 1.514 - - 0.794 - - - 0.720 - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
66. TMEM216 ENSDARG00000091576 357 1.501 - 0.792 0.709 - - - - - - transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]
67. AP5B1 ENSDARG00000078805 62 1.499 - 0.796 0.703 - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
68. ndp ENSDARG00000076569 120 1.474 - 0.768 0.706 - - - - - - Norrie disease (pseudoglioma) [Source:ZFIN;Acc:ZDB-GENE-060216-2]
69. si:dkey-148e3.2 si:dkey-148e3.2 117 1.467 - - 0.722 - - - 0.745 - -
70. msxe msxe 362 1.459 - - 0.714 - - - 0.745 - -
71. limk1b ENSDARG00000003022 172 1.457 - 0.721 - - 0.736 - - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
72. rfx6 ENSDARG00000041702 0 1 - - - - - - 1.000 - - regulatory factor X, 6 [Source:ZFIN;Acc:ZDB-GENE-041014-299]
73. si:dkey-272j9.1 si:dkey-272j9.1 10 1 - - - - - - 1.000 - -
74. prlrb ENSDARG00000045955 12 1 - - - - - - 1.000 - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
75. cacng7a ENSDARG00000063006 2 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
76. CABZ01038329.1 CABZ01038329.1 8 1 - - - - - - 1.000 - -
77. crfb16 ENSDARG00000075181 40 1 - - - - - - 1.000 - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
78. BX255969.1 BX255969.1 16 1 - - - - - - 1.000 - -
79. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
80. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - - 1.000 - -
81. tacr3l ENSDARG00000003054 10 1 - - - - - - 1.000 - - tachykinin receptor 3-like [Source:ZFIN;Acc:ZDB-GENE-061207-19]
82. lim2.2 ENSDARG00000059015 11 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
83. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
84. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
85. syne3 ENSDARG00000023237 23 1 - - - - - - 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
86. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
87. si:ch211-196g2.7 si:ch211-196g2.7 0 1 - - - - - - 1.000 - -
88. si:ch211-238e22.5 ENSDARG00000100229 0 1 - - - - - - 1.000 - - si:ch211-238e22.5 [Source:ZFIN;Acc:ZDB-GENE-041210-374]
89. ugt5d1 ENSDARG00000002394 5 1 - - - - - - 1.000 - - UDP glucuronosyltransferase 5 family, polypeptide D1 [Source:ZFIN;Acc:ZDB-GENE-091118-36]
90. tbx21 ENSDARG00000004473, ENSDARG00000115643 30 1 - - - - - - 1.000 - - T-box 21 [Source:ZFIN;Acc:ZDB-GENE-080104-3]
91. ZDHHC1 ENSDARG00000077546 14 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
92. MSH4 ENSDARG00000075826 37 1 - - - - - - 1.000 - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
93. CU633479.6 ENSDARG00000116146 4 1 - - - - - - 1.000 - -
94. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - - - 1.000 - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
95. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
96. tti2 ENSDARG00000073773 19 1 - - - - - - 1.000 - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
97. serpinb1l2 ENSDARG00000070396 37 1 - - 1.000 - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
98. mfsd6l ENSDARG00000014761 60 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
99. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
100. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11

There are 1206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA