Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CU896555.1

Gene Name Gene ID Reads Annotation
CU896555.1 CU896555.1 27










Genes with expression patterns similar to CU896555.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CU896555.1 CU896555.1 27 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. smarcd3b ENSDARG00000019969 11 2.593 - 0.809 - 0.784 - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
3. ccny ENSDARG00000063677 66 2.33 - 0.714 - - 0.763 - 0.853 - - cyclin Y [Source:ZFIN;Acc:ZDB-GENE-091117-45]
4. BX571880.1 ENSDARG00000097533 499 2 1.000 - - - - 1.000 - - -
5. ciita ENSDARG00000090851 5 2 - - - - - 1.000 1.000 - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
6. si:dkey-242e21.3 ENSDARG00000075723 77 1.961 - 0.961 - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
7. ddx46 ENSDARG00000099458 24 1.93 0.930 - - - - 1.000 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
8. setmar ENSDARG00000074836 29 1.916 - 1.000 - - - - 0.916 - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
9. vtg5 ENSDARG00000092126, ENSDARG00000113031 3 1.908 0.908 - - - - 1.000 - - - vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]
10. ddit4 ENSDARG00000037618 37 1.873 - - - - - 1.000 0.873 - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
11. GPR180 73 1.845 - - - - - 1.000 0.845 - - G protein-coupled receptor 180, transcript variant X2
12. MUC5AC_1 MUC5AC_1 381 1.809 1.000 0.809 - - - - - - -
13. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1.793 - 0.809 - - - - - - 0.984
14. CU638737.1 CU638737.1 17 1.782 1.000 0.782 - - - - - - -
15. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.779 - 0.779 - - - 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
16. SBK3_1 SBK3_1 21 1.754 1.000 - - - - 0.754 - - -
17. rft1 ENSDARG00000060398 146 1.745 - - - - - 0.787 0.958 - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
18. dcbld1 ENSDARG00000015907 36 1.739 - - - - - 0.739 1.000 - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
19. si:ch211-214p16.2 ENSDARG00000094975 59 1.728 - - - 0.744 - - - - 0.984 si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
20. si:ch211-10m5.3 si:ch211-10m5.3 10 1.725 - 0.809 - - - - 0.916 - -
21. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.724 - - - - - 0.724 1.000 - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
22. fto ENSDARG00000044216 33 1.724 - 1.000 - - 0.724 - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
23. si:dkey-202i12.5 si:dkey-202i12.5 20 1.723 1.000 - - - 0.723 - - - -
24. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1.714 1.000 0.714 - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
25. si:dkey-78a14.5 14 1.713 - - - - - - 1.000 0.713 - si:dkey-78a14.5, transcript variant X2
26. lrp2bp ENSDARG00000040478 21 1.71 - 0.710 - - - - 1.000 - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
27. crygs4 ENSDARG00000010701, ENSDARG00000116551 7 1.703 0.904 - - - - - - 0.799 - crystallin, gamma S4 [Source:ZFIN;Acc:ZDB-GENE-050223-2]
28. ZNF408 ENSDARG00000036043 232 1.703 0.930 0.773 - - - - - - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
29. h1m ENSDARG00000102892 319 1.697 - - - 0.731 - - 0.966 - - linker histone H1M [Source:ZFIN;Acc:ZDB-GENE-030131-5614]
30. odf3l2 36 1.697 - 0.710 - - - - 0.987 - - outer dense fiber of sperm tails 3-like 2
31. fbxo15 ENSDARG00000016897 18 1.696 0.930 - - - - - - - 0.766 F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
32. vap ENSDARG00000093053, ENSDARG00000100949 6 1.692 0.908 - - 0.784 - - - - - vascular associated protein [Source:ZFIN;Acc:ZDB-GENE-090313-42]
33. FAM132B FAM132B 39 1.689 - 0.809 - - - - 0.880 - -
34. klf5b ENSDARG00000062106 7 1.686 - - - - - 0.702 - - 0.984 Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
35. isg20l2 ENSDARG00000102266 167 1.675 - - - - - 0.747 0.928 - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
36. LPL ENSDARG00000087697 18 1.672 - - - 0.756 - - 0.916 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
37. LYPLAL1 ENSDARG00000088764 87 1.662 - - - - 0.715 - 0.947 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
38. si:ch211-93g23.2 ENSDARG00000070558 105 1.658 - - - 0.713 - - 0.945 - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
39. pald1b ENSDARG00000039352 66 1.649 - 0.775 - - - 0.874 - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
40. C7H15orf43 C7H15orf43 10 1.644 - 0.809 - - - - - 0.835 -
41. CABZ01071911.2 CABZ01071911.2 64 1.643 - - - - - 0.722 0.921 - -
42. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1.64 0.831 0.809 - - - - - - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
43. tacr3l ENSDARG00000003054 10 1.633 0.849 - - 0.784 - - - - - tachykinin receptor 3-like [Source:ZFIN;Acc:ZDB-GENE-061207-19]
44. si:ch211-162i8.6 si:ch211-162i8.6 15 1.632 0.878 0.754 - - - - - - -
45. TP53BP2 TP53BP2 217 1.627 - - - - - 0.814 0.813 - -
46. si:ch211-95j8.3 ENSDARG00000092580 20 1.622 - - 0.736 - - 0.886 - - - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
47. PEG3_37 PEG3_37 4 1.621 0.866 - - - - - - 0.755 -
48. CU183952.1 CU183952.1 32 1.62 - - - - 0.727 - 0.893 - -
49. CCDC141 ENSDARG00000095675 94 1.617 - 0.852 - 0.765 - - - - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
50. rx3 ENSDARG00000052893 43 1.616 - 0.847 - 0.769 - - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
51. gda ENSDARG00000002986 9 1.608 - 0.809 - - - - - 0.799 - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
52. msgn1 ENSDARG00000070546 188 1.597 - - - 0.888 0.709 - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
53. C12H10orf107 C12H10orf107 8 1.593 - 0.809 - 0.784 - - - - -
54. tmprss15 ENSDARG00000079393 25 1.58 - 0.809 - - - - 0.771 - - transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
55. si:dkeyp-53d3.6 204 1.579 - 0.742 - - - - 0.837 - - si:dkeyp-53d3.6, transcript variant X1
56. sergef ENSDARG00000070986, ENSDARG00000111782 48 1.574 0.865 - - - - 0.709 - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
57. mak ENSDARG00000059287 144 1.572 0.857 - - - - 0.715 - - - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
58. C7H11orf68 C7H11orf68 446 1.562 0.781 0.781 - - - - - - -
59. si:dkey-1d7.3 ENSDARG00000075837 18 1.561 0.752 0.809 - - - - - - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
60. pros1 ENSDARG00000068261 276 1.556 0.720 - - - - - 0.836 - - protein S [Source:ZFIN;Acc:ZDB-GENE-061013-657]
61. vps13d ENSDARG00000017986 183 1.549 - 0.722 - - - - 0.827 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
62. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1.537 - 0.809 - 0.728 - - - - -
63. mipa ENSDARG00000037285, ENSDARG00000116133 507 1.533 - 0.809 - - - 0.724 - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
64. chst3a ENSDARG00000061070 127 1.532 0.816 - - - - 0.716 - - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
65. mfng ENSDARG00000042925 104 1.531 0.830 0.701 - - - - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
66. ZNF423 ENSDARG00000059707 11 1.525 - 0.809 - - - - - - 0.716 zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
67. drc1 ENSDARG00000042182 39 1.521 - 0.810 - - 0.711 - - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
68. lepa ENSDARG00000091085 11 1.501 - - - - - 0.702 - 0.799 - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
69. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.429 - - - - - 0.725 0.704 - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
70. fth1b ENSDARG00000007975 96 1.428 0.723 - - - - 0.705 - - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
71. ABHD15 ABHD15 86 1.424 0.709 - - - - - 0.715 - -
72. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
73. ssh1b ENSDARG00000010031 4 1 - - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
74. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
75. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - - - - - 1.000 - -
76. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
77. si:dkey-30j10.5 ENSDARG00000093186 13 1 1.000 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
78. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1 - - - - - - 1.000 - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
79. pde5ab ENSDARG00000051915 18 1 - - - - - 1.000 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
80. CLDND1_1 CLDND1_1 50 1 - - - - - - 1.000 - -
81. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
82. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
83. dnm3 dnm3 45 1 1.000 - - - - - - - -
84. CR854899.1 ENSDARG00000102357 8 1 - - - - - - 1.000 - -
85. PSMB11_1 PSMB11_1 2 1 - - - - - 1.000 - - -
86. ttc25 ENSDARG00000058140 2 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
87. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
88. ME1 ENSDARG00000053215 8 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
89. SMCHD1 ENSDARG00000104374 2 1 1.000 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
90. si:ch211-188c16.1 ENSDARG00000077288 16 1 - - - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
91. RAB1B RAB1B 20 1 - - - - - 1.000 - - -
92. MDH1B ENSDARG00000018008 29 1 - - - - - 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
93. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
94. si:dkey-258p11.3 si:dkey-258p11.3 9 1 - - - - - - 1.000 - -
95. GPR114 GPR114 1 1 - - - - - - 1.000 - -
96. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1 - - - - - - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
97. BEGAIN BEGAIN 39 1 - - - - - 1.000 - - -
98. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - - - 1.000 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
99. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - - - - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
100. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 1.000 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]

There are 1392 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA