Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR678040.1

Gene Name Gene ID Reads Annotation
CR678040.1 CR678040.1 117










Genes with expression patterns similar to CR678040.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR678040.1 CR678040.1 117 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000
2. arf3b ENSDARG00000036998, ENSDARG00000112366 38 2.501 0.803 - 0.821 - - 0.877 - - - ADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]
3. nrxn3b ENSDARG00000062693 192 1.984 - 1.000 - - - - - - 0.984 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
4. sema4ab ENSDARG00000062352 409 1.908 - 0.925 - - - - - - 0.983 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
5. gpr143 ENSDARG00000034572 559 1.853 - - - - 0.866 - - - 0.987 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
6. si:ch211-113e8.10 ENSDARG00000079631 498 1.85 0.880 - - - - - - - 0.970 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
7. nsmfa ENSDARG00000060025 70 1.825 0.884 - - - - 0.941 - - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
8. mir15a-1 36 1.806 - 0.806 - - - 1.000 - - - microRNA 15a-1
9. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.801 - 0.816 - - - - - - 0.985 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
10. si:ch211-113a14.29 48 1.781 0.891 - - 0.890 - - - - - si:ch211-113a14.29
11. rpusd4 ENSDARG00000012674, ENSDARG00000112436 505 1.77 0.807 - - - - - - - 0.963 RNA pseudouridylate synthase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040801-238]
12. zgc:195001 ENSDARG00000070484 3281 1.768 - 0.795 - - 0.973 - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
13. ATP6AP1L_1 ATP6AP1L_1 508 1.767 - - - - - 0.808 - - 0.959
14. ankk1 ENSDARG00000056921 119 1.747 0.781 - - - - 0.966 - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
15. foxred2 ENSDARG00000061354 718 1.734 - - - - 0.775 - - - 0.959 FAD-dependent oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1026]
16. ggt1b ENSDARG00000018342 49 1.728 - 0.820 - - 0.908 - - - - gamma-glutamyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-110408-13]
17. CU234171.2 CU234171.2 86 1.728 0.840 - - - - 0.888 - - -
18. thsd7ba ENSDARG00000095022 231 1.723 - - - - 0.734 - - - 0.989 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
19. rab39b rab39b 449 1.722 - - - - - 0.765 - - 0.957
20. si:ch211-195i24.1 si:ch211-195i24.1 10 1.721 - 0.721 - - - 1.000 - - -
21. si:dkeyp-82a1.2 ENSDARG00000094192 2 1.721 - 0.721 - - - 1.000 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
22. galm ENSDARG00000057630, ENSDARG00000111113, ENSDARG00000115399 109 1.72 0.795 - - - 0.925 - - - - galactose mutarotase [Source:ZFIN;Acc:ZDB-GENE-040718-66]
23. si:dkey-10p5.10 ENSDARG00000099307 371 1.711 0.730 - - - - - - - 0.981 si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
24. ncam2 ENSDARG00000017466 175 1.708 - 0.721 - - - - - - 0.987 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
25. GPR156 ENSDARG00000086215 126 1.7 0.909 0.791 - - - - - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
26. fam83fb ENSDARG00000104188 79 1.693 0.786 - - - - 0.907 - - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
27. cspg5b ENSDARG00000099793 67 1.687 - 0.721 - - - 0.966 - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
28. KCNJ10 KCNJ10 62 1.68 0.901 - - - - 0.779 - - -
29. slc16a8 ENSDARG00000045153 478 1.678 - - - - 0.702 - - - 0.976 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
30. si:rp71-61h23.4 1921 1.672 - - - - 0.803 - - - 0.869 si:rp71-61h23.4
31. zgc:73226 ENSDARG00000023759 120 1.672 - - - - 0.948 0.724 - - - zgc:73226 [Source:ZFIN;Acc:ZDB-GENE-050703-8]
32. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 1.651 - 0.816 - - - - - - 0.835 solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
33. avpr2aa ENSDARG00000007436 43 1.64 0.916 - - - - 0.724 - - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
34. TMEM63C ENSDARG00000004158, ENSDARG00000112348 21 1.64 - 0.721 - - - 0.919 - - - transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]
35. pcdh8 ENSDARG00000006467 317 1.638 - 0.721 - - - 0.917 - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
36. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 1.635 - - - - 0.705 - - - 0.930 PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
37. CFP ENSDARG00000094451 852 1.63 0.744 - - - - - - - 0.886 complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
38. lxn ENSDARG00000043102 415 1.626 0.849 - - - 0.777 - - - - latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
39. elk4 ENSDARG00000077092 19 1.619 - 0.721 - 0.898 - - - - - ELK4, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-1]
40. CABZ01112331.1 CABZ01112331.1 9 1.617 0.896 0.721 - - - - - - -
41. CR626874.1 ENSDARG00000100141 55 1.613 0.881 - 0.732 - - - - - -
42. pou4f2 ENSDARG00000069737 451 1.607 - - - - - 0.754 - - 0.853 POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
43. elovl2 ENSDARG00000045414 119 1.596 0.800 0.796 - - - - - - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
44. TTBK1 TTBK1 120 1.594 - 0.721 - - 0.873 - - - -
45. CR936975.1 ENSDARG00000096862 22 1.589 - 0.721 - - - 0.868 - - -
46. limk1a ENSDARG00000103467 97 1.575 - 0.859 - - - 0.716 - - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
47. KIF21B ENSDARG00000009733 53 1.569 0.823 - - - - 0.746 - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
48. CABZ01117437.1 CABZ01117437.1 11 1.568 - 0.721 - - - 0.847 - - -
49. wdr47b ENSDARG00000099757 93 1.557 0.785 - - - - 0.772 - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
50. slc1a3b ENSDARG00000043148 431 1.542 - 0.721 - - - 0.821 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
51. b3gat2 ENSDARG00000030733 348 1.531 - 0.721 - - - 0.810 - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
52. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1.526 - - - - 0.780 0.746 - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
53. st8sia1 ENSDARG00000098221 34 1.506 - 0.721 0.785 - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
54. PRICKLE2 PRICKLE2 69 1.503 - 0.727 - - - 0.776 - - -
55. CU179656.1 ENSDARG00000107086 270 1.501 - - - - 0.729 0.772 - - -
56. SYNDIG1 ENSDARG00000100751 165 1.493 - 0.721 - - - 0.772 - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
57. SUSD4 ENSDARG00000026335 195 1.483 - 0.721 0.762 - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
58. si:dkey-77f17.1 si:dkey-77f17.1 83 1.467 - 0.721 - - - 0.746 - - -
59. BX571853.2 ENSDARG00000110441 21 1.467 - 0.721 - - - 0.746 - - -
60. snap25b ENSDARG00000058117 469 1.465 - - - - 0.732 0.733 - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
61. PPP2R5B ENSDARG00000054931 213 1.459 - 0.721 - - - 0.738 - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
62. si:dkey-88e10.2 si:dkey-88e10.2 7 1.445 - 0.721 - - - 0.724 - - -
63. lef1 ENSDARG00000031894 492 1.443 - 0.726 - - - - - - 0.717 lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
64. cacna1c ENSDARG00000008398 193 1.432 - 0.721 - - 0.711 - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
65. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
66. RIC3_1 ENSDARG00000105549 2 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
67. GPR114 GPR114 1 1 - - - - - 1.000 - - -
68. zgc:92249 14 1 - - - - - 1.000 - - - zgc:92249
69. crygm2d14 ENSDARG00000087301 66 1 - - - - - 1.000 - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
70. BX323448.1 ENSDARG00000116236 10 1 - - - - - 1.000 - - -
71. ZNF337_16 ZNF337_16 22 1 - - - - - 1.000 - - -
72. mif4gdb ENSDARG00000102578 31 1 - 1.000 - - - - - - - MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
73. nr1d4a ENSDARG00000031161 24 1 - - - - - 1.000 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
74. si:ch211-207c7.6 si:ch211-207c7.6 23 1 - - - - - 1.000 - - -
75. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
76. zgc:165582 ENSDARG00000074362 198 1 - - - - - 1.000 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
77. npy4r ENSDARG00000043341, ENSDARG00000113787 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
78. pygo1 ENSDARG00000098687 4 1 - - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
79. chrm2a ENSDARG00000098612 5 1 - - - - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
80. si:dkey-4c15.6 si:dkey-4c15.6 6 1 - - - - - 1.000 - - -
81. TDRD6 ENSDARG00000070052 1 1 - - - - - 1.000 - - - tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
82. BX248324.1 ENSDARG00000096489 3 1 - - - - - 1.000 - - -
83. FAM177A1 ENSDARG00000079636 19 1 - - - - - 1.000 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
84. nmu ENSDARG00000043299 67 1 - - - - - 1.000 - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
85. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
86. mapk9 ENSDARG00000077364 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
87. prepl ENSDARG00000017853, ENSDARG00000114415 4 1 - - - - - 1.000 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
88. skor1a ENSDARG00000069030 19 1 - - - - - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
89. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
90. barhl1b ENSDARG00000019013, ENSDARG00000113145 101 1 - - - - - 1.000 - - - BarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
91. ACSL6 12 1 - - - - - 1.000 - - - acyl-CoA synthetase long-chain family member 6
92. HIST1H4J HIST1H4J 31 1 - - - - - 1.000 - - -
93. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
94. FBLN7 ENSDARG00000089519 4 1 - - - - - 1.000 - - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
95. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
96. tnk2b ENSDARG00000104409 1 1 - - - - - 1.000 - - - tyrosine kinase, non-receptor, 2b [Source:ZFIN;Acc:ZDB-GENE-110411-165]
97. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 1 - 1.000 - - - - - - - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
98. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - 1.000 - - - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
99. si:ch211-59g22.2 si:ch211-59g22.2 7 1 - - - - - 1.000 - - -
100. ncanb ENSDARG00000005783 22 1 - - - - - 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]

There are 1612 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA