Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDK5R1

Gene Name Gene ID Reads Annotation
CDK5R1 CDK5R1 562










Genes with expression patterns similar to CDK5R1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CDK5R1 CDK5R1 562 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. syngr3a ENSDARG00000014871 405 3.427 0.776 - - 0.967 - 0.824 0.860 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
3. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 3.296 - 0.745 - 0.840 - 0.852 0.859 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
4. pou3f2a ENSDARG00000070220 817 3.284 0.895 0.728 - - - 0.762 0.899 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
5. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 3.246 0.726 - - 0.800 - 0.921 0.799 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
6. map1aa ENSDARG00000059601 599 3.066 0.726 0.723 - - - 0.845 0.772 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
7. tdg tdg 3269 2.998 0.724 - - 0.837 - 0.721 0.716 - -
8. vim ENSDARG00000010008 3551 2.759 0.848 - - - - 0.948 0.963 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
9. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 2.731 - 0.843 - - - 0.964 0.924 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
10. C8H1orf106 C8H1orf106 2690 2.675 - - - 0.802 - 0.902 0.971 - -
11. nes ENSDARG00000088805 2710 2.667 0.809 - - - - 0.941 0.917 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
12. nova2 ENSDARG00000017673 7685 2.666 0.795 - - - - 0.962 0.909 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
13. adam23a ENSDARG00000062323 580 2.659 - - - 0.940 - 0.829 0.890 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
14. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.649 0.812 - - - - 0.859 0.978 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
15. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.646 - - - 0.788 - 0.912 0.946 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
16. nrarpb ENSDARG00000018958 6225 2.645 0.814 - - - - 0.933 0.898 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
17. st18 663 2.643 - - - 0.914 - 0.813 0.916 - - suppression of tumorigenicity 18, zinc finger
18. vgf ENSDARG00000105529 247 2.638 0.773 - - - - 0.944 0.921 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
19. SPTBN4_1 ENSDARG00000092624 473 2.631 0.814 - - 0.954 - 0.863 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
20. tmie ENSDARG00000069423 305 2.61 0.836 - - - - 0.888 0.886 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
21. CU928222.1 ENSDARG00000097436 1662 2.609 0.813 - - - - 0.886 0.910 - -
22. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.592 0.785 - - - - 0.979 0.828 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
23. atp6v0cb ENSDARG00000036577 3472 2.59 0.792 - - - - 0.936 0.862 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
24. isl1 ENSDARG00000004023 981 2.578 0.826 - - - - 0.820 0.932 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
25. Sep-03 Sep-03 1124 2.577 0.917 - - - - 0.877 0.783 - -
26. myt1b ENSDARG00000102879 5411 2.574 0.766 - - - - 0.946 0.862 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
27. irx1b ENSDARG00000056594 2224 2.571 0.837 - - - - 0.847 0.887 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
28. BX511121.1 ENSDARG00000029997 1774 2.565 0.754 - - - - 0.856 0.955 - -
29. atp1b4 ENSDARG00000053262 1337 2.558 - - - 0.790 - 0.800 0.968 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
30. slc1a3a ENSDARG00000104431 9888 2.557 0.727 - - - - 0.885 0.945 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
31. CABZ01029738.1 CABZ01029738.1 327 2.554 0.843 - - - - 0.789 0.922 - -
32. hmp19 2554 2.552 0.787 - - - - 0.855 0.910 - - HMP19 protein
33. tmem35 ENSDARG00000052567 5685 2.55 0.723 - - - - 0.932 0.895 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
34. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.544 0.855 - - - - 0.905 0.784 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
35. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.542 - - - 0.753 - 0.827 0.962 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
36. fyna ENSDARG00000011370 1679 2.54 0.857 - - - - 0.870 0.813 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
37. pcdh1gc5 ENSDARG00000104826 10052 2.539 0.777 - - - - 0.891 0.871 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
38. chat chat 463 2.535 0.721 - - - - 0.927 0.887 - -
39. neurog1 ENSDARG00000056130 3924 2.535 0.717 - - - - 0.934 0.884 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
40. her4.1 ENSDARG00000056732 1264 2.534 0.741 - - - - 0.889 0.904 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
41. CHL1 CHL1 1553 2.533 0.773 - - - - 0.922 0.838 - -
42. zgc:100906 ENSDARG00000033599 344 2.527 0.810 - - - - 0.769 0.948 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
43. si:ch211-10a23.2 ENSDARG00000060656 471 2.524 - - - 0.902 - 0.741 0.881 - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
44. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.521 0.736 - - - - 0.864 0.921 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
45. nhlh2 ENSDARG00000025495 1860 2.519 0.716 - - - - 0.905 0.898 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
46. flrt1b ENSDARG00000075597 465 2.517 0.735 - - - - 0.891 0.891 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
47. mnx2b ENSDARG00000030350 484 2.508 - 0.807 - - - 0.752 0.949 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
48. CABZ01028287.1 CABZ01028287.1 626 2.505 0.893 - - - - 0.735 0.877 - -
49. epb41a ENSDARG00000099283 860 2.49 0.746 - - - - 0.815 0.929 - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
50. tox ENSDARG00000032317 9126 2.486 0.849 - - - - 0.797 0.840 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
51. slc32a1 ENSDARG00000059775 1092 2.483 0.859 - - - - 0.891 0.733 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
52. her2 ENSDARG00000038205 3219 2.483 0.826 - - - - 0.796 0.861 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
53. plp1a ENSDARG00000103732 3544 2.479 0.753 - - - - 0.836 0.890 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
54. epha4b ENSDARG00000011600 3110 2.477 0.747 - - - - 0.941 0.789 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
55. her12 ENSDARG00000032963 754 2.476 0.708 - - - - 0.885 0.883 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
56. marcksa ENSDARG00000004049 2518 2.476 - - - 0.808 - 0.813 0.855 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
57. eno2 ENSDARG00000014287 2162 2.473 0.719 - - - - 0.820 0.934 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
58. STMN3 ENSDARG00000038465 1009 2.472 0.731 - - - - 0.950 0.791 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
59. tuba1c ENSDARG00000055216 8384 2.47 0.766 - - - - 0.915 0.789 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
60. rusc1 ENSDARG00000078125 617 2.469 0.710 - - - - 0.874 0.885 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
61. mllt11 ENSDARG00000071026 2518 2.469 0.728 - - - - 0.894 0.847 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
62. ptprnb ENSDARG00000077047 2743 2.467 - 0.755 - - - 0.846 0.866 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
63. nell2b ENSDARG00000062797 854 2.464 0.753 - - - - 0.939 0.772 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
64. gfap ENSDARG00000025301 5584 2.457 0.738 - - - - 0.906 0.813 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
65. map7d2a ENSDARG00000068480 513 2.456 0.791 - - - - 0.873 0.792 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
66. si:ch73-265d7.2 ENSDARG00000116713 2142 2.454 0.720 - - - - 0.743 0.991 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
67. gad2 ENSDARG00000015537 724 2.447 0.812 - - - - 0.793 0.842 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
68. negr1 ENSDARG00000021607 1051 2.446 0.735 - - - - 0.862 0.849 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
69. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.445 0.773 - - - - 0.858 0.814 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
70. EFCC1 ENSDARG00000077826 1359 2.444 0.770 - - - - 0.899 0.775 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
71. CABZ01111990.1 CABZ01111990.1 4374 2.444 0.725 - - - - 0.902 0.817 - -
72. syt12 ENSDARG00000101776 215 2.444 0.748 - - - - 0.825 0.871 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
73. syt3 ENSDARG00000075830 430 2.44 - - - 0.965 - 0.744 0.731 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
74. atp6ap1a ENSDARG00000041417 898 2.436 0.841 - - 0.869 - - 0.726 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
75. ADAMTS3 ENSDARG00000060127 2839 2.436 - 0.704 - - - 0.801 0.931 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
76. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.436 - - - 0.887 - 0.730 0.819 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
77. slc12a5b ENSDARG00000078187 329 2.435 0.720 - - - - 0.803 0.912 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
78. hmgb3a ENSDARG00000056725 15668 2.432 0.702 - - - - 0.947 0.783 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
79. ank2b ENSDARG00000043313 3065 2.43 0.806 0.853 - - - 0.771 - - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
80. stmn2b ENSDARG00000070537 1586 2.423 0.830 - - - - 0.892 0.701 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
81. dpysl3 ENSDARG00000002587 4381 2.421 0.732 - - - - 0.913 0.776 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
82. atp6v0a1b ENSDARG00000015174 1052 2.42 - - - 0.748 - 0.892 0.780 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
83. syt11a ENSDARG00000057913 1145 2.414 0.714 - - - - 0.809 0.891 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
84. spock2 ENSDARG00000075393 791 2.413 0.765 - - - - 0.793 0.855 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
85. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.404 0.712 - - - - 0.939 0.753 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
86. ckbb ENSDARG00000043257 3503 2.398 0.718 - - - - 0.921 0.759 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
87. rbfox3 rbfox3 1443 2.391 0.729 - - - - 0.895 0.767 - -
88. rtn1b ENSDARG00000021143 1682 2.39 - - - 0.707 - 0.847 0.836 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
89. celf4 ENSDARG00000070045 1537 2.389 0.719 - - - - 0.819 0.851 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
90. si:ch73-21g5.7 ENSDARG00000093156 9412 2.388 0.724 - - - - 0.782 0.882 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
91. apba1b ENSDARG00000074328 254 2.385 - 0.703 - - - 0.861 0.821 - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
92. CASS4 ENSDARG00000006775 760 2.382 0.722 - - - - 0.754 0.906 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
93. sst1.1 ENSDARG00000040799 677 2.38 0.810 - - - - 0.708 0.862 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
94. mapk12b ENSDARG00000006409 2246 2.378 0.750 - - - - 0.762 0.866 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
95. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.372 - - - 0.829 - 0.766 0.777 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
96. ephb3a ENSDARG00000031548 1872 2.368 - - - 0.723 - 0.831 0.814 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
97. stmn1b ENSDARG00000033655 9491 2.367 0.769 - - - - 0.733 0.865 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
98. gng3 ENSDARG00000009553 2530 2.36 0.742 - - - - 0.827 0.791 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
99. pax6a ENSDARG00000103379 3061 2.359 0.722 - - - - 0.936 0.701 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
100. ATP6AP1L ATP6AP1L 164 2.354 - 0.728 - - - 0.808 0.818 - -

There are 2285 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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