Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC88C

Gene Name Gene ID Reads Annotation
CCDC88C ENSDARG00000053713 1026 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]










Genes with expression patterns similar to CCDC88C

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC88C ENSDARG00000053713 1026 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
2. pes ENSDARG00000018902 3286 2.476 - 0.722 0.884 - - - - - 0.870 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
3. syncripl ENSDARG00000026723 3889 2.442 - - 0.801 - - - 0.789 - 0.852 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
4. znf207a ENSDARG00000015538 2630 2.442 - - 0.965 - - - 0.734 - 0.743 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
5. pomp ENSDARG00000032296 4439 2.323 - 0.742 0.860 - - - - - 0.721 proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
6. ints8 ENSDARG00000057986 1063 1.933 - - 0.971 - - - - - 0.962 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
7. nsun2 ENSDARG00000056665 740 1.923 - - 0.988 - - - - - 0.935 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
8. aqr ENSDARG00000016775 1581 1.897 - - 0.983 - - - - - 0.914 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
9. tm9sf4 ENSDARG00000002536 1684 1.85 - - 0.979 - - - - - 0.871 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
10. myo1b ENSDARG00000024694 1761 1.845 - - 0.981 - - - - - 0.864 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
11. prr12a ENSDARG00000074229 1668 1.825 - - 0.970 - - - - - 0.855 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
12. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.815 - - 0.951 - - - - - 0.864 eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
13. zfyve9a ENSDARG00000101903 437 1.805 0.881 - - - - - - - 0.924 zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]
14. nupl2 ENSDARG00000029043 105 1.803 0.876 - - - - - - - 0.927 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
15. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.8 - - 0.947 - - - - - 0.853 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
16. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.768 - - 0.985 - - - 0.783 - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
17. ciao1 ENSDARG00000059212 1222 1.763 0.781 - 0.982 - - - - - - cytosolic iron-sulfur assembly component 1 [Source:ZFIN;Acc:ZDB-GENE-040426-839]
18. emc3 ENSDARG00000020607 3406 1.755 - - 0.965 - - - - - 0.790 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
19. HAUS2 HAUS2 392 1.753 - - 0.978 0.775 - - - - -
20. si:dkey-19e4.5 ENSDARG00000089886 2562 1.737 - - 0.962 - - - - - 0.775 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
21. myclb ENSDARG00000034956, ENSDARG00000110185 1466 1.732 - 0.750 0.982 - - - - - - MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
22. WDFY3 ENSDARG00000078890 2092 1.729 - 0.761 0.968 - - - - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
23. ncalda ENSDARG00000070688 5069 1.726 - - 0.932 - - - - - 0.794 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
24. bag6 ENSDARG00000075892 3782 1.726 - - 0.959 - - - - - 0.767 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
25. ngly1 ENSDARG00000003205 733 1.724 - 0.804 - - - - - - 0.920 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
26. slc16a8 ENSDARG00000045153 478 1.72 - - - 0.798 - - - - 0.922 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
27. wu:fj29h11 ENSDARG00000096562 863 1.718 - - - 0.784 - - - - 0.934 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
28. rab11fip3 ENSDARG00000016490 661 1.708 - 0.774 - - - - - - 0.934 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
29. zmat2 ENSDARG00000004956 1676 1.707 - 0.725 0.982 - - - - - - zinc finger, matrin-type 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3197]
30. KIAA0355 3250 1.701 - - 0.959 - - - 0.742 - - KIAA0355 ortholog, transcript variant X1
31. ythdf1 ENSDARG00000016447 3391 1.699 0.752 - 0.947 - - - - - - YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]
32. CABZ01112647.1 CABZ01112647.1 147 1.698 - - 0.986 - - 0.712 - - -
33. pabpn1 ENSDARG00000045373 4876 1.695 - - - - - - 0.731 - 0.964 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
34. nudt3a ENSDARG00000016256 2713 1.693 - 0.721 0.972 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
35. ubl3b ENSDARG00000021556 1210 1.686 - - - - - - 0.776 - 0.910 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
36. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.679 - 0.702 0.977 - - - - - - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
37. bxdc2 ENSDARG00000098935 1348 1.677 - 0.711 0.966 - - - - - - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
38. LPHN3 LPHN3 195 1.676 0.907 - - - - - 0.769 - -
39. triap1 ENSDARG00000014963 646 1.669 - - - - - - 0.751 - 0.918 TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
40. gpd1l ENSDARG00000040024 2182 1.665 - 0.712 0.953 - - - - - - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
41. LPL_1 LPL_1 1150 1.662 - - - - - - 0.750 - 0.912
42. cdk13 ENSDARG00000076791 828 1.66 - - - 0.712 - - - - 0.948 cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
43. dstyk ENSDARG00000000853 678 1.659 0.803 - - - - 0.856 - - - dual serine/threonine and tyrosine protein kinase [Source:ZFIN;Acc:ZDB-GENE-040826-2]
44. 5S_rRNA_21 5S_rRNA_21 1323 1.657 - - - 0.785 - - - - 0.872
45. paxip1 ENSDARG00000005606 1417 1.651 0.723 - - - - - - - 0.928 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
46. mmp16a 1128 1.649 0.724 - - - - - - - 0.925 matrix metallopeptidase 16a (membrane-inserted)
47. aldh16a1 ENSDARG00000037935 617 1.643 0.722 - - - - - - - 0.921 aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
48. papss1 ENSDARG00000057099 809 1.632 - - - - - - 0.703 - 0.929 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
49. ssb ENSDARG00000029252 3394 1.624 - 0.800 - - - - - - 0.824 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
50. ppm1da ENSDARG00000009273 7713 1.61 - - 0.904 - - - - - 0.706 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
51. arid1b ENSDARG00000092503 1376 1.61 - - - - - - 0.742 - 0.868 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
52. rnf216 ENSDARG00000087893 518 1.6 0.890 - - - - - 0.710 - - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
53. angptl4 ENSDARG00000035859 2701 1.599 - - - - - - 0.758 - 0.841 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
54. ube2nb ENSDARG00000045877 4583 1.581 - 0.700 0.881 - - - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
55. brd3a ENSDARG00000006527 1636 1.553 - - - - - 0.708 - - 0.845 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
56. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 1.541 0.835 - - 0.706 - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
57. skiv2l2 760 1.535 0.739 - - - - 0.796 - - - superkiller viralicidic activity 2-like 2
58. tgif1 ENSDARG00000059337 4020 1.512 0.723 - - 0.789 - - - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
59. sf1 ENSDARG00000008188 5142 1.511 0.749 - - 0.762 - - - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
60. MRPL21 ENSDARG00000003846 3244 1.505 - 0.805 - - - - 0.700 - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
61. ube2a ENSDARG00000098466 12765 1.487 - - 0.781 - - - 0.706 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
62. snrnp70 ENSDARG00000077126 5921 1.475 - 0.756 - - - - - - 0.719 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
63. dido1 ENSDARG00000057940 3819 1.464 - - - - - - 0.751 - 0.713 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
64. uhrf1 ENSDARG00000103409 3282 1.459 - - - 0.756 - - - - 0.703 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
65. esco2 ENSDARG00000014685 1971 1.458 - - - 0.702 - 0.756 - - - establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
66. plecb ENSDARG00000021987 13621 1.455 - 0.723 0.732 - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
67. npas3b npas3b 1446 1.454 - - - 0.705 - - - - 0.749
68. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.444 - 0.723 - - - - 0.721 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
69. pcnxl4 377 1.431 0.720 - - - - - 0.711 - - pecanex-like 4 (Drosophila), transcript variant X2
70. ankrd10a ENSDARG00000037100 375 1.422 - 0.709 - 0.713 - - - - - ankyrin repeat domain 10a [Source:ZFIN;Acc:ZDB-GENE-040426-700]
71. ppm1g ENSDARG00000075559 6516 1.415 - 0.712 0.703 - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
72. bcl9 ENSDARG00000036687 1124 0.993 - - 0.993 - - - - - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
73. taf6l ENSDARG00000079684 1408 0.99 - - 0.990 - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
74. dennd5a ENSDARG00000017006 3426 0.99 - - 0.990 - - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
75. syt11a ENSDARG00000057913 1145 0.989 - - 0.989 - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
76. pcbp2 ENSDARG00000099039 4248 0.989 - - 0.989 - - - - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
77. eda ENSDARG00000074591, ENSDARG00000113529 263 0.989 - - 0.989 - - - - - - ectodysplasin A [Source:ZFIN;Acc:ZDB-GENE-050107-6]
78. thbs3b ENSDARG00000012060 922 0.989 - - 0.989 - - - - - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
79. trpc4apb ENSDARG00000020647 670 0.989 - - 0.989 - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
80. trim3b ENSDARG00000005397 680 0.989 - - 0.989 - - - - - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
81. flr ENSDARG00000038024 562 0.988 - - 0.988 - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
82. CT027778.1 CT027778.1 265 0.988 - - 0.988 - - - - - -
83. med13b ENSDARG00000003910 1143 0.988 - - 0.988 - - - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
84. ZPLXDC2 ZPLXDC2 1298 0.988 - - 0.988 - - - - - -
85. dtwd1 ENSDARG00000111509 347 0.988 - - 0.988 - - - - - - DTW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-23]
86. zgc:66472 ENSDARG00000075916 635 0.988 - - 0.988 - - - - - - zgc:66472 [Source:ZFIN;Acc:ZDB-GENE-030131-5705]
87. ercc2 ENSDARG00000021985 678 0.988 - - 0.988 - - - - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
88. C22H19orf44 C22H19orf44 481 0.988 - - 0.988 - - - - - -
89. sgce ENSDARG00000012138 912 0.987 - - 0.987 - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
90. cttnbp2nl cttnbp2nl 166 0.987 - - 0.987 - - - - - -
91. si:ch211-59h6.1 ENSDARG00000013022 193 0.987 - - 0.987 - - - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
92. coro7 ENSDARG00000089616 2141 0.987 - - 0.987 - - - - - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
93. ELOVL4 ELOVL4 3026 0.987 - - 0.987 - - - - - -
94. ZNF648 ENSDARG00000104823 194 0.987 - - 0.987 - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
95. scd ENSDARG00000033662 146 0.987 - - 0.987 - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
96. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 0.987 - - 0.987 - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
97. taf1 ENSDARG00000035330 912 0.987 - - 0.987 - - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
98. ftr78 ftr78 273 0.987 - - 0.987 - - - - - -
99. nf1b ENSDARG00000004184 548 0.987 - - 0.987 - - - - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
100. nckipsd ENSDARG00000079475 777 0.986 - - 0.986 - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]

There are 1434 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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