Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC88A

Gene Name Gene ID Reads Annotation
CCDC88A CCDC88A 90










Genes with expression patterns similar to CCDC88A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC88A CCDC88A 90 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fbn1 39 1.797 - 0.913 - - - 0.884 - - - fibrillin 1
3. mmp23bb ENSDARG00000009825 133 1.635 - - - - - 0.809 0.826 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
4. zgc:110434 21 1.618 - - - - - 0.884 0.734 - - zgc:110434
5. EGR4_1 EGR4_1 14 1.618 - - - - - 0.884 0.734 - -
6. CAMSAP2 CAMSAP2 109 1.618 - - - - - 0.884 0.734 - -
7. ei24 ENSDARG00000053840 78 1.618 - - - - - 0.884 0.734 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
8. si:ch73-191k20.4 37 1.612 0.728 - - - - 0.884 - - - si:ch73-191k20.4, transcript variant X1
9. PEG3_38 PEG3_38 521 1.575 0.767 0.808 - - - - - - -
10. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.543 - - - - - 0.831 0.712 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
11. rap2ab ENSDARG00000040246 63 1.528 - 0.794 - - - - 0.734 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
12. CABZ01077140.1 CABZ01077140.1 2 1.48 - - - - - 0.746 0.734 - -
13. si:dkey-167i21.2 ENSDARG00000093886 10 1.476 - - - - 0.742 - 0.734 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
14. loxl5b ENSDARG00000076904 468 1.45 - - - - - 0.708 0.742 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
15. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.434 - 0.702 - - - 0.732 - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
16. cdkn2d ENSDARG00000094176 190 0.94 - 0.940 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
17. TMEM100_1 TMEM100_1 44 0.933 - - - - - 0.933 - - -
18. azi1 azi1 507 0.933 - 0.933 - - - - - - -
19. dopey1 438 0.932 - 0.932 - - - - - - - dopey family member 1, transcript variant X4
20. fscn2b ENSDARG00000074396 177 0.924 - - - - - - 0.924 - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
21. NEFH NEFH 101 0.921 - - - - 0.921 - - - -
22. FP017295.1 ENSDARG00000091185 22 0.917 - 0.917 - - - - - - -
23. BEND2_1 BEND2_1 45 0.917 - 0.917 - - - - - - -
24. fasn ENSDARG00000087657 99 0.916 - - - - 0.916 - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
25. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 0.915 - 0.915 - - - - - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
26. UNC13A UNC13A 36 0.904 - - - - - 0.904 - - -
27. rnmtl1a 112 0.9 - 0.900 - - - - - - - RNA methyltransferase like 1a
28. clu ENSDARG00000010434 498 0.9 - - - - - 0.900 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
29. NTRK3 NTRK3 163 0.895 - - - - - 0.895 - - -
30. ntn1b ENSDARG00000022531 248 0.894 - - - - - 0.894 - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
31. C9HXorf36 C9HXorf36 44 0.89 - - - - - 0.890 - - -
32. proza ENSDARG00000037783, ENSDARG00000116864 500 0.89 - 0.890 - - - - - - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
33. shhb ENSDARG00000038867 338 0.89 - - - - - 0.890 - - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
34. porcnl ENSDARG00000052455 29 0.888 - 0.888 - - - - - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
35. CR318660.3 CR318660.3 0 0.884 - - - - - 0.884 - - -
36. si:dkey-40j3.3 ENSDARG00000103597 5 0.884 - - - - - 0.884 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
37. si:ch73-335d12.1 si:ch73-335d12.1 1 0.884 - - - - - 0.884 - - -
38. tlr1 ENSDARG00000100649 2 0.884 - - - - - 0.884 - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
39. BX294653.4 BX294653.4 1 0.884 - - - - - 0.884 - - -
40. fbxo43 ENSDARG00000104186 40 0.884 - - - - - 0.884 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
41. si:dkey-9c18.1 si:dkey-9c18.1 3 0.884 - - - - - 0.884 - - -
42. PPFIBP1 PPFIBP1 46 0.884 - - - - - 0.884 - - -
43. carm1l ENSDARG00000091531 13 0.884 - - - - - 0.884 - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
44. tti2 ENSDARG00000073773 19 0.884 - - - - - 0.884 - - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
45. aven ENSDARG00000002894 49 0.884 - - - - - 0.884 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
46. si:ch1073-221c23.2 si:ch1073-221c23.2 17 0.884 - - - - - 0.884 - - -
47. pth1b ENSDARG00000091961, ENSDARG00000115353 5 0.884 - - - - - 0.884 - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
48. si:dkey-29f21.5 si:dkey-29f21.5 3 0.884 - - - - - 0.884 - - -
49. CABZ01078520.1 CABZ01078520.1 2 0.884 - - - - - 0.884 - - -
50. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 0.884 - - - - - 0.884 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
51. lmbrd2a ENSDARG00000099566 15 0.884 - - - - - 0.884 - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
52. kcnq2a ENSDARG00000075307 7 0.884 - - - - - 0.884 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
53. SYN3 0 0.884 - - - - - 0.884 - - - synapsin III
54. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 0.884 - - - - - 0.884 - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
55. hp ENSDARG00000051890, ENSDARG00000095807 4 0.884 - - - - - 0.884 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
56. heatr1 ENSDARG00000099742 92 0.884 - - - - - 0.884 - - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
57. si:ch211-22k7.8 si:ch211-22k7.8 0 0.884 - - - - - 0.884 - - -
58. ifnlr1 ENSDARG00000087131 73 0.884 - - - - - 0.884 - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
59. CR854899.1 ENSDARG00000102357 8 0.884 - - - - - 0.884 - - -
60. RIC3 ENSDARG00000105549 3 0.884 - - - - - 0.884 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
61. si:ch211-226h7.4 si:ch211-226h7.4 0 0.884 - - - - - 0.884 - - -
62. si:dkey-250k15.4 ENSDARG00000092169 19 0.884 - - - - - 0.884 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
63. tor2a ENSDARG00000100559, ENSDARG00000115324 58 0.884 - - - - - 0.884 - - - torsin family 2, member A [Source:ZFIN;Acc:ZDB-GENE-050913-60]
64. tpgs2 ENSDARG00000011926 48 0.884 - - - - - 0.884 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
65. pak1_1 ENSDARG00000103959 28 0.884 - - - - - 0.884 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
66. si:ch211-223g7.7 si:ch211-223g7.7 1 0.884 - - - - - 0.884 - - -
67. si:ch211-113a14.15_1 2 0.884 - - - - - 0.884 - - - si:ch211-113a14.15
68. si:dkey-32n7.8 ENSDARG00000090630 0 0.884 - - - - - 0.884 - - - si:dkey-32n7.8 [Source:ZFIN;Acc:ZDB-GENE-121214-326]
69. pi15b ENSDARG00000061292 1 0.884 - - - - - 0.884 - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
70. si:dkey-250k10.4 ENSDARG00000099751 2 0.884 - - - - - 0.884 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
71. col5a2b ENSDARG00000024847 17 0.884 - - - - - 0.884 - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
72. ngb ENSDARG00000053475, ENSDARG00000116651 33 0.884 - - - - - 0.884 - - - neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1]
73. si:ch211-132b12.2 ENSDARG00000094946 15 0.884 - - - - - 0.884 - - - si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
74. arhgef19 ENSDARG00000078853 17 0.884 - - - - - 0.884 - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
75. si:ch211-171b20.3 ENSDARG00000094794 2 0.884 - - - - - 0.884 - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
76. ENDOD1_4 ENDOD1_4 2 0.884 - - - - - 0.884 - - -
77. si:ch211-122l14.7 ENSDARG00000095576 5 0.884 - - - - - 0.884 - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
78. atp8b5a ENSDARG00000062040 1 0.884 - - - - - 0.884 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
79. DEPDC7 19 0.884 - - - - - 0.884 - - - DEP domain containing 7, transcript variant X1
80. elavl2 ENSDARG00000040732 44 0.884 - - - - - 0.884 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
81. si:dkey-257e4.5 si:dkey-257e4.5 3 0.884 - - - - - 0.884 - - -
82. si:dkey-161j23.6 ENSDARG00000092347 0 0.884 - - - - - 0.884 - - - si:dkey-161j23.6 [Source:ZFIN;Acc:ZDB-GENE-091204-173]
83. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 0.884 - - - - - 0.884 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
84. CABZ01113978.1 CABZ01113978.1 1 0.884 - - - - - 0.884 - - -
85. coch ENSDARG00000024032 7 0.884 - - - - - 0.884 - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
86. si:ch211-218c6.9 si:ch211-218c6.9 40 0.884 - - - - - 0.884 - - -
87. si:dkey-247i3.1 ENSDARG00000076252 11 0.884 - - - - - 0.884 - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
88. CREM_1 CREM_1 9 0.884 - - - - - 0.884 - - -
89. CABZ01036951.1 CABZ01036951.1 71 0.884 - - - - - 0.884 - - -
90. or125-4 ENSDARG00000095417 2 0.884 - - - - - 0.884 - - - odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
91. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 0.884 - - - - - 0.884 - - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
92. veph veph 3 0.884 - - - - - 0.884 - - -
93. TMC2 TMC2 5 0.884 - - - - - 0.884 - - -
94. HTR7 17 0.884 - - - - - 0.884 - - - 5-hydroxytryptamine receptor 7
95. AHNAK2 AHNAK2 33 0.884 - - - - - 0.884 - - -
96. zgc:162879 ENSDARG00000074163 6 0.884 - - - - - 0.884 - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]
97. si:ch1073-403i13.1 si:ch1073-403i13.1 1 0.884 - - - - - 0.884 - - -
98. CABZ01079804.1 ENSDARG00000117619 1 0.884 - - - - - 0.884 - - -
99. SNTB2 ENSDARG00000051763 2 0.884 - - - - - 0.884 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
100. PEG3_34 PEG3_34 0 0.884 - - - - - 0.884 - - -

There are 765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA