Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC88A

Gene Name Gene ID Reads Annotation
CCDC88A CCDC88A 90










Genes with expression patterns similar to CCDC88A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC88A CCDC88A 90 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fbn1 39 1.797 - 0.913 - - - 0.884 - - - fibrillin 1
3. mmp23bb ENSDARG00000009825 133 1.635 - - - - - 0.809 0.826 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
4. ei24 ENSDARG00000053840 78 1.618 - - - - - 0.884 0.734 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
5. CAMSAP2 CAMSAP2 109 1.618 - - - - - 0.884 0.734 - -
6. zgc:110434 21 1.618 - - - - - 0.884 0.734 - - zgc:110434
7. EGR4_1 EGR4_1 14 1.618 - - - - - 0.884 0.734 - -
8. si:ch73-191k20.4 37 1.612 0.728 - - - - 0.884 - - - si:ch73-191k20.4, transcript variant X1
9. PEG3_38 PEG3_38 521 1.575 0.767 0.808 - - - - - - -
10. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.543 - - - - - 0.831 0.712 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
11. rap2ab ENSDARG00000040246 63 1.528 - 0.794 - - - - 0.734 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
12. CABZ01077140.1 CABZ01077140.1 2 1.48 - - - - - 0.746 0.734 - -
13. si:dkey-167i21.2 ENSDARG00000093886 10 1.476 - - - - 0.742 - 0.734 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
14. loxl5b ENSDARG00000076904 468 1.45 - - - - - 0.708 0.742 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
15. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.434 - 0.702 - - - 0.732 - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
16. cdkn2d ENSDARG00000094176 190 0.94 - 0.940 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
17. TMEM100_1 TMEM100_1 44 0.933 - - - - - 0.933 - - -
18. azi1 azi1 507 0.933 - 0.933 - - - - - - -
19. dopey1 438 0.932 - 0.932 - - - - - - - dopey family member 1, transcript variant X4
20. fscn2b ENSDARG00000074396 177 0.924 - - - - - - 0.924 - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
21. NEFH NEFH 101 0.921 - - - - 0.921 - - - -
22. BEND2_1 BEND2_1 45 0.917 - 0.917 - - - - - - -
23. FP017295.1 ENSDARG00000091185 22 0.917 - 0.917 - - - - - - -
24. fasn ENSDARG00000087657 99 0.916 - - - - 0.916 - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
25. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 0.915 - 0.915 - - - - - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
26. UNC13A UNC13A 36 0.904 - - - - - 0.904 - - -
27. clu ENSDARG00000010434 498 0.9 - - - - - 0.900 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
28. rnmtl1a 112 0.9 - 0.900 - - - - - - - RNA methyltransferase like 1a
29. NTRK3 NTRK3 163 0.895 - - - - - 0.895 - - -
30. ntn1b ENSDARG00000022531 248 0.894 - - - - - 0.894 - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
31. shhb ENSDARG00000038867 338 0.89 - - - - - 0.890 - - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
32. C9HXorf36 C9HXorf36 44 0.89 - - - - - 0.890 - - -
33. proza ENSDARG00000037783, ENSDARG00000116864 500 0.89 - 0.890 - - - - - - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
34. porcnl ENSDARG00000052455 29 0.888 - 0.888 - - - - - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
35. si:ch211-225h9.2 si:ch211-225h9.2 16 0.884 - - - - - 0.884 - - -
36. si:dkey-14d8.1 ENSDARG00000095332 11 0.884 - - - - - 0.884 - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
37. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 0.884 - - - - - 0.884 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
38. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 0.884 - - - - - 0.884 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
39. mtmr10 ENSDARG00000010601 37 0.884 - - - - - 0.884 - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
40. adarb1b ENSDARG00000003544 31 0.884 - - - - - 0.884 - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
41. CR847844.3 CR847844.3 1 0.884 - - - - - 0.884 - - -
42. apex2 ENSDARG00000008472 39 0.884 - - - - - 0.884 - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
43. abcc5 ENSDARG00000061233 60 0.884 - - - - - 0.884 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
44. ZNF337 ZNF337 3 0.884 - - - - - 0.884 - - -
45. C12H17orf70 C12H17orf70 25 0.884 - - - - - 0.884 - - -
46. CABZ01079804.1 ENSDARG00000117619 1 0.884 - - - - - 0.884 - - -
47. SNTB2 ENSDARG00000051763 2 0.884 - - - - - 0.884 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
48. PEG3_34 PEG3_34 0 0.884 - - - - - 0.884 - - -
49. si:ch211-173n18.3 ENSDARG00000028478 8 0.884 - - - - - 0.884 - - - si:ch211-173n18.3 [Source:ZFIN;Acc:ZDB-GENE-120215-62]
50. napgl napgl 39 0.884 - - - - - 0.884 - - -
51. sdhaf1 ENSDARG00000092478 51 0.884 - - - - - 0.884 - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
52. ENSDARG00000086666 ENSDARG00000086666 2159 0.884 - - - - - 0.884 - - -
53. si:ch211-173m16.2 ENSDARG00000093284 186 0.884 - - - - - 0.884 - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
54. zgc:136902 zgc:136902 4 0.884 - - - - - 0.884 - - -
55. dnmt3aa ENSDARG00000005394 63 0.884 - - - - - 0.884 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
56. BX569793.1 ENSDARG00000096832 0 0.884 - - - - - 0.884 - - -
57. BX571969.1 BX571969.1 8 0.884 - - - - - 0.884 - - -
58. ENSDARG00000091642 ENSDARG00000091642 14 0.884 - - - - - 0.884 - - -
59. si:ch211-207o17.8 si:ch211-207o17.8 1 0.884 - - - - - 0.884 - - -
60. si:ch73-341k19.1 ENSDARG00000095946 5 0.884 - - - - - 0.884 - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
61. NPM2 NPM2 41 0.884 - - - - - 0.884 - - -
62. CABZ01035647.1 CABZ01035647.1 5 0.884 - - - - - 0.884 - - -
63. TRIM14_11 TRIM14_11 2 0.884 - - - - - 0.884 - - -
64. zgc:195633_1 142 0.884 - - - - - 0.884 - - - zgc:195633
65. ptpn20 ENSDARG00000075459 1 0.884 - - - - - 0.884 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
66. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 0.884 - - - - - 0.884 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
67. hel_dr4 hel_dr4 12 0.884 - - - - - 0.884 - - -
68. zeb1a ENSDARG00000016788 48 0.884 - - - - - 0.884 - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
69. si:dkey-20j1.5 si:dkey-20j1.5 1 0.884 - - - - - 0.884 - - -
70. AL928685.1 ENSDARG00000095786 0 0.884 - - - - - 0.884 - - -
71. si:dkey-117n7.4 ENSDARG00000092064 22 0.884 - - - - - 0.884 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
72. si:ch211-145h19.1 31 0.884 - - - - - 0.884 - - - si:ch211-145h19.1
73. hbaa2 ENSDARG00000069735 10 0.884 - - - - - 0.884 - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
74. si:ch1073-185p12.2 ENSDARG00000100199 7 0.884 - - - - - 0.884 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
75. si:dkey-43b14.6 si:dkey-43b14.6 20 0.884 - - - - - 0.884 - - -
76. BX005421.3 ENSDARG00000114309 7 0.884 - - - - - 0.884 - - -
77. KCNJ12 KCNJ12 17 0.884 - - - - - 0.884 - - -
78. slc4a4b ENSDARG00000044808 9 0.884 - - - - - 0.884 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
79. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 0.884 - - - - - 0.884 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
80. si:dkey-26h11.2 ENSDARG00000096458 10 0.884 - - - - - 0.884 - - - si:dkey-26h11.2 [Source:ZFIN;Acc:ZDB-GENE-120709-94]
81. si:ch73-111e15.1 ENSDARG00000008182 2 0.884 - - - - - 0.884 - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
82. si:ch73-381a20.2 si:ch73-381a20.2 11 0.884 - - - - - 0.884 - - -
83. si:dkey-118j18.3 si:dkey-118j18.3 4 0.884 - - - - - 0.884 - - -
84. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 0.884 - - - - - 0.884 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
85. U1_54 U1_54 0 0.884 - - - - - 0.884 - - -
86. vcpip1 ENSDARG00000060177 56 0.884 - - - - - 0.884 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
87. wu:fa26c03 18714 0.884 - - - - - 0.884 - - - wu:fa26c03
88. si:dkey-14o18.1 si:dkey-14o18.1 108 0.884 - - - - - 0.884 - - -
89. ENSDARG00000089152 ENSDARG00000089152 12 0.884 - - - - - 0.884 - - -
90. si:ch73-27e22.3 ENSDARG00000077263 10 0.884 - - - - - 0.884 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
91. si:ch211-198c19.1 ENSDARG00000089333 3 0.884 - - - - - 0.884 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
92. ungb ENSDARG00000094922 16 0.884 - - - - - 0.884 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
93. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 0.884 - - - - - 0.884 - - -
94. cbx7b ENSDARG00000087181 5 0.884 - - - - - 0.884 - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
95. esyt1b ENSDARG00000014239 8 0.884 - - - - - 0.884 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
96. EGFR_1 EGFR_1 2 0.884 - - - - - 0.884 - - -
97. gcnt4b ENSDARG00000077550 2 0.884 - - - - - 0.884 - - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
98. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 0.884 - - - - - 0.884 - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
99. tti2 ENSDARG00000073773 19 0.884 - - - - - 0.884 - - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
100. si:ch1073-221c23.2 si:ch1073-221c23.2 17 0.884 - - - - - 0.884 - - -

There are 765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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