Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for BX005106.1

Gene Name Gene ID Reads Annotation
BX005106.1 BX005106.1 22










Genes with expression patterns similar to BX005106.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. BX005106.1 BX005106.1 22 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. chd3 ENSDARG00000021405, ENSDARG00000115235 17 2 1.000 - - - 1.000 - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
3. ARHGEF38 ENSDARG00000079377 9 1.953 - - - - - 0.953 - 1.000 - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
4. hsd11b2 ENSDARG00000001975 245 1.895 1.000 - - - - 0.895 - - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
5. CABZ01044346.1 CABZ01044346.1 12 1.861 - - - - - 0.949 0.912 - -
6. DLEU7 DLEU7 91 1.84 - - - - - 0.928 0.912 - -
7. ttc7a ENSDARG00000074760 39 1.839 - - - - - 0.927 0.912 - - tetratricopeptide repeat domain 7A [Source:ZFIN;Acc:ZDB-GENE-010319-27]
8. mybpc2a ENSDARG00000030157 11 1.798 0.861 - 0.937 - - - - - - myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
9. si:dkey-242h9.3 ENSDARG00000069189 83 1.737 - - - - - 0.893 0.844 - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
10. ACOT12 ENSDARG00000054534 61 1.734 - - - - - 0.834 0.900 - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
11. si:ch211-152l15.4 si:ch211-152l15.4 13 1.726 - - - - 0.814 - 0.912 - -
12. st6galnac1.1 ENSDARG00000043814 95 1.719 0.782 - - - - 0.937 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
13. pnocb ENSDARG00000024189 18 1.685 - - - - - 0.953 - 0.732 - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
14. BX323050.1 BX323050.1 116 1.675 0.917 - - - - - 0.758 - -
15. arsg ENSDARG00000101715 57 1.651 - - - - - 0.887 0.764 - - arylsulfatase G [Source:ZFIN;Acc:ZDB-GENE-060503-154]
16. twist1b ENSDARG00000076010 88 1.633 0.805 - 0.828 - - - - - - twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
17. ELL3 ELL3 226 1.632 0.771 - - - - - 0.861 - -
18. CACNA1F CACNA1F 2 1.626 - - - 0.838 - - - 0.788 -
19. FP102192.1 ENSDARG00000101104 32 1.537 - - - 0.705 - 0.832 - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
20. TDRD7B ENSDARG00000077523 124 1.532 0.790 - - - - - 0.742 - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
21. si:dkey-1p9.5 si:dkey-1p9.5 55 1.481 - - - - - 0.772 0.709 - -
22. efna3a ENSDARG00000014675 68 1.476 0.717 - - - 0.759 - - - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
23. chn2 ENSDARG00000011845 217 1.422 - - - - - 0.713 0.709 - - chimerin 2 [Source:ZFIN;Acc:ZDB-GENE-091020-5]
24. BX649415.4 BX649415.4 3 1 - - - - - - - 1.000 -
25. si:dkey-47k20.5 ENSDARG00000115763 0 1 - - - - 1.000 - - - - si:dkey-47k20.5 [Source:ZFIN;Acc:ZDB-GENE-060503-77]
26. fgl2 fgl2 9 1 - - - - 1.000 - - - -
27. CABZ01065246.2 CABZ01065246.2 45 1 - - - - 1.000 - - - -
28. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
29. C5HXorf57 C5HXorf57 4 1 1.000 - - - - - - - -
30. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - 1.000 - - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
31. si:ch211-57m13.1 ENSDARG00000095927 1 1 - - - - 1.000 - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
32. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - 1.000 - - - -
33. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
34. BX927253.1 ENSDARG00000096072 1 1 - - - - 1.000 - - - -
35. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
36. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - - - - 1.000 - - - -
37. si:dkey-111e8.5 ENSDARG00000093960 28 1 1.000 - - - - - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
38. BX465205.1 ENSDARG00000097139 64 1 1.000 - - - - - - - -
39. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
40. sostdc1a ENSDARG00000068892 127 1 1.000 - - - - - - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
41. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
42. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
43. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
44. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
45. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
46. BX569789.4 BX569789.4 3 1 - - - - 1.000 - - - -
47. si:ch211-229l10.11 ENSDARG00000101223 3 1 - - - - 1.000 - - - - si:ch211-229l10.11 [Source:ZFIN;Acc:ZDB-GENE-110913-131]
48. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
49. si:dkey-233e3.6 si:dkey-233e3.6 1 1 - - - - 1.000 - - - -
50. CTRL ENSDARG00000068680 1 1 - - - - 1.000 - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
51. LPXN ENSDARG00000079315 12 1 - - - - 1.000 - - - - leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
52. U1_11 U1_11 0 1 - - - - 1.000 - - - -
53. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
54. ATG16L2 ENSDARG00000043238, ENSDARG00000109384 0 1 - - - - 1.000 - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
55. CABZ01079979.1 CABZ01079979.1 1 1 - - - - 1.000 - - - -
56. AL929192.3 AL929192.3 4 1 - - - - - - - 1.000 -
57. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
58. CNTD1 2 1 - - - - 1.000 - - - - cyclin N-terminal domain containing 1
59. U1 U1 0 1 - - - - 1.000 - - - -
60. zgc:113142 ENSDARG00000038969 74 1 1.000 - - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
61. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
62. PLA2G4C_2 PLA2G4C_2 10 1 - - - - 1.000 - - - -
63. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
64. si:ch211-199m9.3 50 1 - - - - 1.000 - - - - si:ch211-199m9.3, transcript variant X3
65. si:dkey-92j12.5 ENSDARG00000094677 5 1 - - - - 1.000 - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
66. DNAI1 DNAI1 11 1 - - - - 1.000 - - - -
67. HIST1H4H HIST1H4H 26 1 - - - - - - - 1.000 -
68. si:dkey-47k16.4_1 ENSDARG00000113005 5 1 1.000 - - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
69. CR790388.1_1 ENSDARG00000078922 1 1 1.000 - - - - - - - -
70. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
71. hmha1 hmha1 58 1 1.000 - - - - - - - -
72. P2RY14 ENSDARG00000103305 41 1 - - - - - - 1.000 - - purinergic receptor P2Y14 [Source:HGNC Symbol;Acc:HGNC:16442]
73. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
74. si:ch1073-111a5.3 si:ch1073-111a5.3 0 1 - - - - 1.000 - - - -
75. BX547934.1 ENSDARG00000097061 35 1 1.000 - - - - - - - -
76. FAT1 FAT1 689 1 1.000 - - - - - - - -
77. ankrd1b ENSDARG00000076192 204 1 1.000 - - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
78. PAMR1 ENSDARG00000093480 40 1 1.000 - - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
79. zgc:172051 ENSDARG00000086569 12 1 - - - - - - - 1.000 - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
80. tlr5a ENSDARG00000044415 3 1 - - - - 1.000 - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
81. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
82. v2rx4 ENSDARG00000023168 0 1 - - - - - - - 1.000 - vomeronasal 2 receptor, x4 [Source:ZFIN;Acc:ZDB-GENE-050419-263]
83. snoU13 snoU13 2 1 1.000 - - - - - - - -
84. U2_2 U2_2 2 1 - - - - 1.000 - - - -
85. si:dkey-188k17.2 7 1 1.000 - - - - - - - - si:dkey-188k17.2
86. TRIM35 TRIM35 100 1 - - - - 1.000 - - - -
87. CCDC15 ENSDARG00000067517 28 1 - - - - - - 1.000 - - coiled-coil domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-120411-25]
88. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
89. si:dkey-88j15.3 ENSDARG00000076573 1 1 1.000 - - - - - - - - si:dkey-88j15.3 [Source:ZFIN;Acc:ZDB-GENE-100922-28]
90. calhm1 ENSDARG00000077021 2 1 - - - - 1.000 - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
91. zgc:66473_1 ENSDARG00000087289, ENSDARG00000087375 1 1 - - - - - - - 1.000 - zgc:66473 [Source:ZFIN;Acc:ZDB-GENE-030131-5708]
92. dnaaf2 ENSDARG00000103132 24 1 1.000 - - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
93. CMA1_4 CMA1_4 23 1 - - - - - - - 1.000 -
94. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 1.000 - - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
95. sebox ENSDARG00000042526 2 1 - - - - 1.000 - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
96. CR391991.2 ENSDARG00000103510 0 1 - - - - 1.000 - - - -
97. iffo1a ENSDARG00000062976 5 1 1.000 - - - - - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
98. arl10 37 1 - - - - 1.000 - - - - ADP-ribosylation factor-like 10
99. RBBP6_12 RBBP6_12 0 1 - - - - 1.000 - - - -
100. scospondin ENSDARG00000067859 4 1 - - - - 1.000 - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]

There are 1050 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA