Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BRK1

Gene Name Gene ID Reads Annotation
BRK1 ENSDARG00000041974 6430 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]










Genes with expression patterns similar to BRK1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. BRK1 ENSDARG00000041974 6430 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
2. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 3.448 0.910 0.764 0.912 - - - - - 0.862 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
3. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 3.11 - 0.750 - 0.754 - 0.716 - - 0.890 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
4. si:ch211-10d23.5 ENSDARG00000095510 2632 2.6 0.947 - - 0.757 - - - - 0.896 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
5. nol10 ENSDARG00000020077 984 2.507 - - 0.894 0.722 - - - - 0.891 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
6. ctnna1 ENSDARG00000102441 7984 2.459 - 0.799 0.886 - - 0.774 - - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
7. exosc1 ENSDARG00000059841 6895 2.404 - 0.779 - - - 0.753 - - 0.872 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
8. mdh1a mdh1a 11035 2.398 - 0.710 0.916 - - 0.772 - - -
9. ppib ENSDARG00000092798 21969 2.221 0.734 0.765 0.722 - - - - - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
10. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 1.831 0.943 - 0.888 - - - - - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
11. srebf2 ENSDARG00000063438 1982 1.821 - - 0.897 - - - - - 0.924 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
12. necap2 ENSDARG00000046002 4372 1.818 0.936 - - - - - - - 0.882 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
13. sort1b ENSDARG00000056252 2652 1.809 0.941 - 0.868 - - - - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
14. EEF1E1 ENSDARG00000071774 3806 1.793 - - 0.890 - - - - - 0.903 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
15. nap1l4b ENSDARG00000068868 3285 1.781 - - 0.884 - - - - - 0.897 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
16. mri1 ENSDARG00000075754 2567 1.78 - - 0.879 - - - - - 0.901 methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
17. zfand5b ENSDARG00000002271 4145 1.78 0.950 - - - - - - - 0.830 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
18. eprs ENSDARG00000060494 4729 1.773 - - 0.867 - - - - - 0.906 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
19. ppm1k ENSDARG00000010655 1285 1.765 0.950 - - - - 0.815 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
20. nrg1 ENSDARG00000104314 1081 1.751 0.950 - - 0.801 - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
21. zgc:100919 zgc:100919 7746 1.748 0.946 - - - - 0.802 - - -
22. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 1.735 0.946 - 0.789 - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
23. cyfip1 ENSDARG00000044345 5483 1.727 - - 0.901 - - - - - 0.826 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
24. dad1 ENSDARG00000102105 14788 1.726 - 0.889 - - - - - - 0.837 defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
25. hnrnpk ENSDARG00000018914 8841 1.718 - - 0.837 - - - - - 0.881 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
26. st13 ENSDARG00000021973 7787 1.698 0.930 - - - - - - - 0.768 ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
27. atf4b1 atf4b1 17316 1.697 - - 0.872 - - - - - 0.825
28. histh1l ENSDARG00000035519 12293 1.695 0.931 - - - - 0.764 - - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
29. alas1 ENSDARG00000021059 4892 1.695 0.934 - - - - 0.761 - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
30. ppp2r2d ENSDARG00000102009 5710 1.695 - - 0.846 - - - - - 0.849 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
31. sdc4 ENSDARG00000059906 10105 1.693 - - 0.897 - - - - - 0.796 syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
32. hes6 ENSDARG00000019335 4754 1.693 - - 0.894 - - - - - 0.799 hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
33. twf1a ENSDARG00000115712 3465 1.687 - 0.777 0.910 - - - - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
34. fam203a fam203a 570 1.686 - - 0.893 0.793 - - - - -
35. rnf121 ENSDARG00000060282 1809 1.683 - - 0.909 - - 0.774 - - - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
36. cars ENSDARG00000036164 2019 1.676 - - 0.924 0.752 - - - - - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
37. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.676 - 0.750 - - - - - - 0.926 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
38. lepre1 lepre1 5346 1.668 - - - 0.802 - - - - 0.866
39. tmem50a ENSDARG00000015757 3244 1.666 - 0.756 0.910 - - - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
40. srp72 ENSDARG00000014139 5221 1.666 0.897 - - - - 0.769 - - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
41. myl12.2 ENSDARG00000025326 1887 1.66 - 0.758 - - - - - - 0.902 myosin, light chain 12, genome duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9028]
42. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.659 0.936 - - - - - - - 0.723 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
43. dnttip2 ENSDARG00000057648 2381 1.658 0.949 0.709 - - - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
44. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 1.653 0.951 - - - - 0.702 - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
45. wasf2 ENSDARG00000024209 5338 1.652 0.924 - - - - 0.728 - - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
46. eif4h ENSDARG00000042252 6742 1.652 - - 0.841 - - 0.811 - - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
47. serpinh1a ENSDARG00000075954 6488 1.651 0.923 - - - - - - - 0.728 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
48. psmd11b ENSDARG00000005134 4242 1.65 - 0.789 0.861 - - - - - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
49. arpc2 ENSDARG00000075989 22423 1.645 0.900 0.745 - - - - - - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
50. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.642 0.899 - - - - - - - 0.743 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
51. ist1 ENSDARG00000051888 4536 1.64 0.924 0.716 - - - - - - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
52. matn3b ENSDARG00000069265 856 1.632 - - - 0.744 - - - - 0.888 matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
53. mccc2 ENSDARG00000017571 5635 1.632 - - 0.880 - - - - - 0.752 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
54. hebp2 ENSDARG00000042630 2308 1.631 - 0.749 - - - - - - 0.882 heme binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-914]
55. pum1 ENSDARG00000099256 5017 1.631 - - 0.845 - - 0.786 - - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
56. nudt9 ENSDARG00000087927 1148 1.63 - - - - - 0.730 - - 0.900 nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
57. lamc1 ENSDARG00000036279 11025 1.629 0.904 - - - - 0.725 - - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
58. snd1 ENSDARG00000006766 12906 1.62 0.763 - - - - - - - 0.857 staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
59. esrp1 ENSDARG00000011245 2097 1.617 - - - - - 0.732 - - 0.885 epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
60. zgc:100918 ENSDARG00000087243 5451 1.616 - - 0.784 - - - - - 0.832 zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
61. ssbp4 ENSDARG00000056483 10196 1.611 - 0.791 0.820 - - - - - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
62. agpat3 ENSDARG00000036549 1093 1.611 - - 0.896 - - 0.715 - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
63. itgb1b.1 ENSDARG00000053232 4721 1.609 0.895 0.714 - - - - - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
64. im:7136729 im:7136729 1625 1.607 - - - 0.719 - - - - 0.888
65. atp6v1h ENSDARG00000006370 7028 1.603 0.882 - - - - 0.721 - - - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
66. setd8a 2549 1.603 - - 0.903 - - 0.700 - - - SET domain containing (lysine methyltransferase) 8a
67. si:ch73-110p20.1 5932 1.594 - - 0.844 - - - - - 0.750 si:ch73-110p20.1
68. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.593 - - - 0.712 - - - - 0.881 inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
69. zgc:158309 zgc:158309 2696 1.586 - - 0.878 - - 0.708 - - -
70. abi1a ENSDARG00000010155 5631 1.585 - - - 0.723 - - - - 0.862 abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
71. prkcda ENSDARG00000009208 1508 1.585 - - 0.884 0.701 - - - - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
72. TUBB8P7_1 TUBB8P7_1 2722 1.584 - - 0.867 - - - - - 0.717
73. mtmr12 ENSDARG00000059817, ENSDARG00000116606 622 1.577 - - - 0.732 - 0.845 - - - myotubularin related protein 12 [Source:ZFIN;Acc:ZDB-GENE-050401-1]
74. USMG5 USMG5 10356 1.576 - 0.836 0.740 - - - - - -
75. cpsf3 ENSDARG00000027649 6897 1.575 - - - - - 0.738 - - 0.837 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
76. gapdhs ENSDARG00000039914 8760 1.565 - - - 0.758 - - - - 0.807 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
77. adh8b ENSDARG00000024278, ENSDARG00000116820 8008 1.548 - 0.734 0.814 - - - - - - alcohol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-030529-2]
78. arglu1a ENSDARG00000019223 8716 1.526 0.813 - - - - 0.713 - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
79. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.525 - - 0.794 0.731 - - - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
80. degs1 ENSDARG00000007347 2481 1.522 - - - 0.789 - 0.733 - - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
81. cdh1 ENSDARG00000102750 8654 1.521 - 0.726 - - - 0.795 - - - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
82. sepw1 17630 1.518 - 0.716 - - - - - - 0.802 selenoprotein W, 1
83. kdm5c ENSDARG00000006124 4389 1.515 - - 0.812 - - 0.703 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
84. si:ch211-85n16.3 ENSDARG00000096346 1095 1.498 - - - 0.789 - - - - 0.709 si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
85. higd2a ENSDARG00000052371 7354 1.497 - 0.784 - - - 0.713 - - - HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
86. gars ENSDARG00000059070 17015 1.495 - - 0.788 - - 0.707 - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
87. psmb7 ENSDARG00000037962 11542 1.494 - 0.749 - - - - - 0.745 - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
88. C20H6orf211 C20H6orf211 529 1.472 - - - 0.729 - 0.743 - - -
89. fkbp14 ENSDARG00000040695 7725 1.468 - - 0.708 - - - - - 0.760 FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
90. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.467 - 0.706 - - - 0.761 - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
91. fbxo28 ENSDARG00000027159 9602 0.983 0.983 - - - - - - - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
92. mycla ENSDARG00000006003 1866 0.955 0.955 - - - - - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
93. rad50 ENSDARG00000038917 1105 0.955 0.955 - - - - - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
94. si:dkey-4c15.19 si:dkey-4c15.19 219 0.955 0.955 - - - - - - - -
95. cx35.4 ENSDARG00000042866 685 0.955 0.955 - - - - - - - - connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
96. HAUS8 HAUS8 625 0.955 0.955 - - - - - - - -
97. foxj1b ENSDARG00000088290 343 0.955 0.955 - - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
98. kat2a ENSDARG00000104734 802 0.955 0.955 - - - - - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
99. baz1a ENSDARG00000063233, ENSDARG00000099745 563 0.955 0.955 - - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
100. ZNF385C ENSDARG00000058154 478 0.954 0.954 - - - - - - - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]

There are 1201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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