Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for AL953879.1

Gene Name Gene ID Reads Annotation
AL953879.1 AL953879.1 5










Genes with expression patterns similar to AL953879.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. AL953879.1 AL953879.1 5 2 - 1.000 - - - 1.000 - - -
2. slc8a4a ENSDARG00000055154 90 1.994 - 1.000 - - - 0.994 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
3. si:dkey-32e6.6 ENSDARG00000070857 79 1.88 - 1.000 - - - 0.880 - - - si:dkey-32e6.6 [Source:ZFIN;Acc:ZDB-GENE-081031-90]
4. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.858 - 0.882 - - - 0.976 - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
5. calhm2 ENSDARG00000039482 138 1.844 - 1.000 - - - 0.844 - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
6. rab25a ENSDARG00000058800 451 1.798 - 0.885 - - - 0.913 - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
7. ENSDARG00000075779 ENSDARG00000075779 64 1.737 - 0.894 - - - 0.843 - - -
8. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1.733 - 1.000 - - - 0.733 - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
9. mcph1 ENSDARG00000058372 51 1.724 - 0.751 - - - 0.973 - - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
10. grm4 ENSDARG00000040156 342 1.661 - 0.919 - - - 0.742 - - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
11. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.627 - 0.759 - - - 0.868 - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
12. BX465851.1 BX465851.1 237 1.615 - 0.898 - - - 0.717 - - -
13. si:dkey-103i16.6 ENSDARG00000062893, ENSDARG00000116729 108 1.554 - 0.792 - - - 0.762 - - - si:dkey-103i16.6 [Source:ZFIN;Acc:ZDB-GENE-061207-46]
14. TTYH1 ENSDARG00000076804 399 1.538 - 0.701 - - - 0.837 - - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
15. gtpbp10 ENSDARG00000040300 533 1.497 - 0.768 - - - 0.729 - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
16. si:ch73-55c23.2 si:ch73-55c23.2 105 1.488 - 0.720 - - - 0.768 - - -
17. itga11a ENSDARG00000036086, ENSDARG00000111495 254 1.478 - 0.774 - - - 0.704 - - - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
18. sdr42e1 ENSDARG00000098838 25 1 - - - - - 1.000 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
19. gda ENSDARG00000002986 9 1 - 1.000 - - - - - - - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
20. mhc1zaa_1 ENSDARG00000092162 27 1 - 1.000 - - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
21. NETO2_1 NETO2_1 15 1 - 1.000 - - - - - - -
22. si:ch211-161h7.8 ENSDARG00000089919 60 1 - 1.000 - - - - - - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
23. SYNGAP1 SYNGAP1 4 1 - 1.000 - - - - - - -
24. si:ch73-122g19.1 ENSDARG00000069323 2 1 - 1.000 - - - - - - - si:ch73-122g19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-239]
25. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - 1.000 - - - - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
26. si:dkey-88l16.5 ENSDARG00000094850 12 1 - 1.000 - - - - - - - si:dkey-88l16.5 [Source:ZFIN;Acc:ZDB-GENE-091204-332]
27. U1_55 U1_55 4 1 - - - - - 1.000 - - -
28. zgc:154055 ENSDARG00000103924 452 1 - 1.000 - - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
29. pdk2 pdk2 32 1 - - - - - 1.000 - - -
30. MUC5AC_1 MUC5AC_1 381 1 - 1.000 - - - - - - -
31. BX465848.3 BX465848.3 4 1 - 1.000 - - - - - - -
32. MYO15B ENSDARG00000074852 6 1 - 1.000 - - - - - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
33. mipa ENSDARG00000037285, ENSDARG00000116133 507 1 - 1.000 - - - - - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
34. 5S_rRNA_3 5S_rRNA_3 1 1 - 1.000 - - - - - - -
35. ftr03 8 1 - - - - - 1.000 - - - finTRIM family, member 3
36. si:dkey-40j3.1 si:dkey-40j3.1 1 1 - 1.000 - - - - - - -
37. FAM177B 9 1 - 1.000 - - - - - - - family with sequence similarity 177 member B
38. KMO ENSDARG00000009160 1 1 - 1.000 - - - - - - - kynurenine 3-monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030424-4]
39. zgc:112294 ENSDARG00000010602 23 1 - 1.000 - - - - - - - zgc:112294 [Source:ZFIN;Acc:ZDB-GENE-050522-418]
40. si:dkeyp-4f2.2 si:dkeyp-4f2.2 53 1 - 1.000 - - - - - - -
41. MTUS2 MTUS2 1 1 - 1.000 - - - - - - -
42. fasn_1 ENSDARG00000087657 31 1 - 1.000 - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
43. nlgn4b 1 1 - 1.000 - - - - - - - neuroligin 4b, transcript variant X1
44. si:dkey-192k22.2 ENSDARG00000095111 4 1 - - - - - 1.000 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
45. panx2 ENSDARG00000063019 3 1 - 1.000 - - - - - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
46. spc24 ENSDARG00000093622 9 1 - 1.000 - - - - - - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-456]
47. si:ch211-117i10.10 si:ch211-117i10.10 18 1 - 1.000 - - - - - - -
48. si:dkey-246j6.3 ENSDARG00000103497 2 1 - 1.000 - - - - - - - si:dkey-246j6.3 [Source:ZFIN;Acc:ZDB-GENE-110913-132]
49. si:zfos-754c12.1 si:zfos-754c12.1 89 1 - 1.000 - - - - - - -
50. vtg6 ENSDARG00000016825, ENSDARG00000114847 1 1 - 1.000 - - - - - - - vitellogenin 6 [Source:ZFIN;Acc:ZDB-GENE-001201-5]
51. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1 - 1.000 - - - - - - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
52. trim54 ENSDARG00000029907 10 1 - 1.000 - - - - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
53. TMEM132B TMEM132B 2 1 - 1.000 - - - - - - -
54. CU693477.1 CU693477.1 7 1 - 1.000 - - - - - - -
55. C2CD4C C2CD4C 4 1 - 1.000 - - - - - - -
56. pus7l_1 ENSDARG00000069780 49 1 - 1.000 - - - - - - - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
57. gc3 31 1 - 1.000 - - - - - - - guanylyl cyclase 3, transcript variant X2
58. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - 1.000 - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
59. C7H15orf43 C7H15orf43 10 1 - 1.000 - - - - - - -
60. edil3 edil3 24 1 - 1.000 - - - - - - -
61. prrg2 ENSDARG00000087193 15 1 - 1.000 - - - - - - - proline rich Gla (G-carboxyglutamic acid) 2 [Source:ZFIN;Acc:ZDB-GENE-130625-1]
62. shisa9 shisa9 35 1 - 1.000 - - - - - - -
63. C3AR1 18 1 - 1.000 - - - - - - - C3a anaphylatoxin chemotactic receptor
64. FP085391.3 FP085391.3 14 1 - 1.000 - - - - - - -
65. samd10b ENSDARG00000094377 18 1 - 1.000 - - - - - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
66. si:dkey-163m14.7 65 1 - 1.000 - - - - - - - si:dkey-163m14.7
67. mir199-2 mir199-2 38 1 - 1.000 - - - - - - -
68. irgf1 ENSDARG00000070774 7 1 - - - - - 1.000 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
69. si:dkey-71b5.3 ENSDARG00000095522 1 1 - 1.000 - - - - - - - si:dkey-71b5.3 [Source:ZFIN;Acc:ZDB-GENE-100922-91]
70. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1 - 1.000 - - - - - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
71. gbp2 ENSDARG00000038669 91 1 - 1.000 - - - - - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
72. si:dkey-175g6.2 ENSDARG00000086665 39 1 - 1.000 - - - - - - - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
73. ZNF423 ENSDARG00000059707 11 1 - 1.000 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
74. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - 1.000 - - - - - - -
75. ENSDARG00000006874 ENSDARG00000006874 3 1 - 1.000 - - - - - - -
76. CABZ01111953.1 ENSDARG00000099747 38 1 - 1.000 - - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
77. si:dkey-1d7.3 ENSDARG00000075837 18 1 - 1.000 - - - - - - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
78. smarcd3b ENSDARG00000019969 11 1 - 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
79. PCOLCE PCOLCE 25 1 - 1.000 - - - - - - -
80. CABZ01079192.1 ENSDARG00000101629 23 1 - - - - - 1.000 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
81. st8sia7.1 ENSDARG00000054211 34 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
82. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 - - - - - 1.000 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
83. BX323448.1 ENSDARG00000116236 10 1 - 1.000 - - - - - - -
84. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - 1.000 - - - - - - -
85. dlgap1a ENSDARG00000014280 1 1 - 1.000 - - - - - - - discs, large (Drosophila) homolog-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030616-580]
86. BX927369.2 BX927369.2 9 1 - 1.000 - - - - - - -
87. retsatl ENSDARG00000034989 41 1 - - - - - 1.000 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
88. zgc:73349 zgc:73349 4 1 - - - - - 1.000 - - -
89. si:dkey-250k10.4 ENSDARG00000099751 2 1 - 1.000 - - - - - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
90. URB1_1 URB1_1 8 1 - 1.000 - - - - - - -
91. CABZ01033130.1 CABZ01033130.1 5 1 - 1.000 - - - - - - -
92. CR354549.1 ENSDARG00000117215 3 1 - 1.000 - - - - - - -
93. CABZ01062083.1 CABZ01062083.1 40 1 - - - - - 1.000 - - -
94. AL844186.1 ENSDARG00000114351 41 1 - 1.000 - - - - - - -
95. BX511266.1 BX511266.1 21 1 - 1.000 - - - - - - -
96. DTX4_1 ENSDARG00000076302 31 1 - 1.000 - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
97. CABZ01088346.1 ENSDARG00000099362 30 1 - 1.000 - - - - - - -
98. CABZ01000592.1 CABZ01000592.1 1 1 - 1.000 - - - - - - -
99. nsmce4a ENSDARG00000024311 125 1 - 1.000 - - - - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
100. CCDC83 ENSDARG00000077179 29 1 - 1.000 - - - - - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]

There are 1294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA