Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_5

Gene Name Gene ID Reads Annotation
5S_rRNA_5 5S_rRNA_5 1










Genes with expression patterns similar to 5S_rRNA_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
2. SMCHD1 ENSDARG00000104374 2 2 - - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
3. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
4. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
5. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
6. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
7. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
8. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
9. MOB2 MOB2 4 1 - - - - 1.000 - - - -
10. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
11. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
12. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
13. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
14. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
15. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - 1.000 - - - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
16. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
17. CABZ01069012.1 CABZ01069012.1 0 1 - - 1.000 - - - - - -
18. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
19. per1a ENSDARG00000056885 0 1 - - 1.000 - - - - - - period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1]
20. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
21. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
22. dennd6aa ENSDARG00000030239 1 1 - - 1.000 - - - - - - DENN/MADD domain containing 6Aa [Source:ZFIN;Acc:ZDB-GENE-041010-63]
23. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
24. spata7 ENSDARG00000075898 16 1 - - 1.000 - - - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
25. CABZ01078849.1 CABZ01078849.1 0 1 - - 1.000 - - - - - -
26. si:ch211-15j21.2 si:ch211-15j21.2 13 1 - - 1.000 - - - - - -
27. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
28. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
29. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
30. myo7bb ENSDARG00000077201 7 1 - - 1.000 - - - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
31. si:dkey-153k10.6 10 1 - - 1.000 - - - - - - si:dkey-153k10.6, transcript variant X1
32. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - 1.000 - - - - - -
33. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
34. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
35. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
36. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
37. tenc1a tenc1a 3 1 - - 1.000 - - - - - -
38. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
39. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
40. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
41. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
42. FBXO16 ENSDARG00000033949 10 1 - - 1.000 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
43. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - 1.000 - - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
44. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
45. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
46. ZNF70 ZNF70 2 1 - - 1.000 - - - - - -
47. TMEM241 ENSDARG00000090685 11 1 - - 1.000 - - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
48. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
49. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
50. slc25a15a ENSDARG00000063539 50 1 - - 1.000 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
51. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
52. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
53. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
54. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
55. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
56. guca1c ENSDARG00000030758 9 1 - - 1.000 - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
57. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
58. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
59. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
60. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
61. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
62. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
63. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
64. kcnh8 ENSDARG00000062640 10 1 - - 1.000 - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
65. U1_51 U1_51 0 1 - - 1.000 - - - - - -
66. wibg wibg 2 1 - - - - 1.000 - - - -
67. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
68. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - 1.000 - - - - - -
69. CR790363.3 CR790363.3 5 1 - - 1.000 - - - - - -
70. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
71. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
72. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
73. RECK ENSDARG00000090039 15 1 - - 1.000 - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
74. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
75. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
76. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
77. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
78. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
79. si:ch211-152f22.2 si:ch211-152f22.2 0 1 - - 1.000 - - - - - -
80. ZBED1_5 ZBED1_5 1 1 - - 1.000 - - - - - -
81. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
82. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
83. viml ENSDARG00000044501 5 1 - - 1.000 - - - - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
84. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
85. agbl5 ENSDARG00000045900 2 1 - - 1.000 - - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
86. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
87. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
88. si:busm1-180g5.7_1 si:busm1-180g5.7_1 0 1 - - 1.000 - - - - - -
89. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
90. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
91. DXO ENSDARG00000036852 16 1 - - 1.000 - - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
92. si:ch211-131e11.20 si:ch211-131e11.20 0 1 - - 1.000 - - - - - -
93. ODF2 ODF2 6 1 - - - - 1.000 - - - -
94. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
95. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
96. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - 1.000 - - - - - -
97. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
98. BX511182.1 BX511182.1 8 1 - - 1.000 - - - - - -
99. CU693378.1 CU693378.1 0 1 - - 1.000 - - - - - -
100. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA