Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_4

Gene Name Gene ID Reads Annotation
5S_rRNA_4 5S_rRNA_4 0










Genes with expression patterns similar to 5S_rRNA_4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
2. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
3. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
4. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
5. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
6. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
7. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
8. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
9. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
10. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
11. hip1r hip1r 10 1 - - - - - 1.000 - - -
12. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
13. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
14. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
15. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
16. DKK3 DKK3 12 1 - - - - - 1.000 - - -
17. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
18. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
19. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
20. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
21. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
22. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
23. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
24. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
25. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
26. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
27. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
28. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
29. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
30. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
31. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
32. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
33. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
34. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
35. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
36. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
37. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
38. itm1 itm1 32 1 - - - - - 1.000 - - -
39. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
40. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
41. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
42. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
43. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
44. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
45. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
46. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
47. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
48. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
49. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
50. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
51. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
52. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
53. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
54. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
55. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
56. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
57. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
58. EXT1 EXT1 3 1 - - - - - 1.000 - - -
59. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
60. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
61. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
62. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
63. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
64. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
65. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
66. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
67. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
68. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
69. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
70. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
71. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
72. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
73. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
74. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
75. vip ENSDARG00000078247 10 1 - - - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
76. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
77. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
78. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
79. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
80. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
81. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
82. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
83. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
84. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
85. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
86. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
87. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
88. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
89. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
90. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
91. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
92. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
93. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
94. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
95. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
96. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
97. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
98. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
99. dapk2 dapk2 24 1 - - - - - 1.000 - - -
100. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -

There are 211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA