Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_10

Gene Name Gene ID Reads Annotation
5S_rRNA_10 5S_rRNA_10 2










Genes with expression patterns similar to 5S_rRNA_10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_10 5S_rRNA_10 2 4 1.000 - 1.000 - - - 1.000 - 1.000
2. sez6a ENSDARG00000100876 35 2 1.000 - 1.000 - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
3. SOX8 SOX8 22 2 1.000 - - - - - 1.000 - -
4. F2RL3 ENSDARG00000079399 29 2 1.000 - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
5. si:ch211-202m22.1 ENSDARG00000094491 24 2 - - 1.000 - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
6. si:dkey-177p2.15p si:dkey-177p2.15p 20 2 1.000 - 1.000 - - - - - -
7. si:dkey-4p15.5 ENSDARG00000086272 7 2 - - 1.000 - - - 1.000 - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
8. CU695076.1 CU695076.1 7 2 1.000 - 1.000 - - - - - -
9. abhd10a ENSDARG00000076435 3 2 1.000 - 1.000 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
10. si:ch73-95a24.1 si:ch73-95a24.1 11 2 - - - - - - 1.000 - 1.000
11. si:dkey-16j24.1 2 2 - - 1.000 - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
12. si:ch211-160d14.9 8 2 1.000 - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
13. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 2 - - 1.000 - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
14. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.966 1.000 - - - - - 0.966 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
15. CABZ01069081.1 CABZ01069081.1 16 1.906 1.000 - - - - - 0.906 - -
16. si:ch211-250m6.8 si:ch211-250m6.8 51 1.893 - - 0.893 - - - 1.000 - -
17. MUC5B_1 MUC5B_1 7 1.89 - - - - - - 1.000 - 0.890
18. cacnb2a ENSDARG00000099045 374 1.881 1.000 - - - - - 0.881 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
19. MAP3K13 ENSDARG00000009493 8 1.855 1.000 - 0.855 - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
20. EDN3 14 1.846 - - 0.846 - - - 1.000 - - endothelin 3
21. FAM177A1 ENSDARG00000079636 19 1.826 1.000 - 0.826 - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
22. vipr1b ENSDARG00000059058 62 1.809 1.000 - - - - - 0.809 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
23. ubxn10 ENSDARG00000052535 24 1.766 1.000 - - - - - 0.766 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
24. ARHGAP17 ARHGAP17 29 1.764 1.000 - - - - - 0.764 - -
25. IGFN1_2 IGFN1_2 3 1.764 - - - - - - 0.764 - 1.000
26. si:dkey-217m5.3 si:dkey-217m5.3 22 1.748 1.000 - - - - - 0.748 - -
27. si:ch211-196n4.5 si:ch211-196n4.5 63 1.714 0.881 - - - - - 0.833 - -
28. CR352265.1 ENSDARG00000062758 39 1.707 - - 0.917 - - - 0.790 - -
29. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1.702 - - 0.702 - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
30. CR936540.2 CR936540.2 4 1.692 - - 0.702 - - - - - 0.990
31. si:ch211-207c7.6 si:ch211-207c7.6 23 1.605 0.731 - - - - - 0.874 - -
32. CPNE7 ENSDARG00000102584 95 1.605 0.746 - - - - - 0.859 - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
33. slco5a1 slco5a1 383 1.452 0.717 - - - - - 0.735 - -
34. si:ch1073-155h21.1 ENSDARG00000007582 137 1 - - - - - - 1.000 - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
35. FP236168.1 FP236168.1 150 1 1.000 - - - - - - - -
36. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
37. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
38. hs3st4 ENSDARG00000052648 6 1 - - - - - - - - 1.000 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
39. si:dkey-230i18.1 si:dkey-230i18.1 3 1 1.000 - - - - - - - -
40. neurod6b ENSDARG00000020794 164 1 - - - - - - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
41. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
42. PEG3_14 PEG3_14 2 1 - - 1.000 - - - - - -
43. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 1 - - 1.000 - - - - - -
44. lrit1a ENSDARG00000019179 9 1 - - - - - - 1.000 - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
45. gp1bb ENSDARG00000074441 116 1 1.000 - - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
46. aox1 aox1 14 1 - - - - - - 1.000 - -
47. cx34.5 ENSDARG00000069411 3 1 1.000 - - - - - - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
48. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
49. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - - - - - - - 1.000 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
50. rprma ENSDARG00000053383 12 1 - - - - - - 1.000 - - reprimo, TP53 dependent G2 arrest mediator candidate a [Source:ZFIN;Acc:ZDB-GENE-050522-218]
51. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
52. pnp4b ENSDARG00000029230 6 1 - - - - - - 1.000 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
53. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - - - - - - 1.000 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
54. smpd3 ENSDARG00000098226 1 1 1.000 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
55. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
56. CABZ01070852.2 ENSDARG00000114999 16 1 1.000 - - - - - - - -
57. si:ch211-194e1.8 si:ch211-194e1.8 14 1 1.000 - - - - - - - -
58. taar19d ENSDARG00000115081 2 1 - - - - - - 1.000 - - trace amine associated receptor 19d [Source:ZFIN;Acc:ZDB-GENE-060413-18]
59. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
60. cyb561 ENSDARG00000038176 55 1 1.000 - - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
61. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
62. PEG3_21 PEG3_21 2 1 1.000 - - - - - - - -
63. BEGAIN_1 BEGAIN_1 7 1 - - 1.000 - - - - - -
64. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 1 - - 1.000 - - - - - -
65. apba1a ENSDARG00000103848 0 1 - - 1.000 - - - - - - amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
66. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
67. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - - - - - - - - 1.000
68. DGKG ENSDARG00000062696 1 1 - - - - - - 1.000 - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
69. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
70. ppp2r3a ENSDARG00000077722 7 1 - - - - - - - - 1.000 protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
71. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
72. trpc2 trpc2 10 1 - - - - - - 1.000 - -
73. slc34a1a ENSDARG00000028824 35 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
74. col28a1 col28a1 5 1 1.000 - - - - - - - -
75. PSKH2 PSKH2 1 1 - - 1.000 - - - - - -
76. cyp19a1b ENSDARG00000098360 8 1 1.000 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
77. CR847543.1 ENSDARG00000086708 155 1 1.000 - - - - - - - -
78. ankrd37 ENSDARG00000056376 131 1 - - - - - - 1.000 - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
79. si:ch211-203b20.4 ENSDARG00000091790 3 1 - - - - - - 1.000 - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
80. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - - - - 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
81. si:dkey-13m3.1 si:dkey-13m3.1 45 1 - - - - - - 1.000 - -
82. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
83. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
84. PLCG2 ENSDARG00000068763 11 1 1.000 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
85. si:ch211-276k2.2 4 1 - - 1.000 - - - - - - si:ch211-276k2.2
86. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
87. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1 1.000 - - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
88. HIST2H4B HIST2H4B 9 1 - - - - - - - - 1.000
89. si:dkey-21e13.3 ENSDARG00000096701 8 1 - - - - - - 1.000 - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
90. si:dkey-164k14.1 si:dkey-164k14.1 5 1 - - 1.000 - - - - - -
91. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
92. FAM13C FAM13C 1 1 - - - - - - - - 1.000
93. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - 1.000 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
94. ANO2 ENSDARG00000101363 1 1 - - 1.000 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
95. FOLR1 FOLR1 25 1 - - - - - - 1.000 - -
96. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
97. FAM196B FAM196B 1 1 1.000 - - - - - - - -
98. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
99. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
100. NMI 3 1 - - - - - - 1.000 - - N-myc (and STAT) interactor

There are 900 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA