Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vsx2

Gene Name Gene ID Reads Annotation
Vsx2 ENSMUSG00000021239 34 visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]







Genes with expression patterns similar to Vsx2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vsx2 ENSMUSG00000021239 34 6 1.000 1.000 1.000 1.000 1.000 1.000 visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
2. Chi3l7 Chi3l7 3 2.455 0.815 0.711 0.929 - - -
3. Foxn4 ENSMUSG00000042002 22 2.358 - - 0.929 0.706 0.723 - forkhead box N4 [Source:MGI Symbol;Acc:MGI:2151057]
4. A930009A15Rik ENSMUSG00000092210 2 1.86 - - 0.929 - - 0.931 RIKEN cDNA A930009A15 gene [Source:MGI Symbol;Acc:MGI:1925048]
5. Wdr66 ENSMUSG00000029442 10 1.86 - - 0.929 - - 0.931 WD repeat domain 66 [Source:MGI Symbol;Acc:MGI:1918495]
6. Sox14 ENSMUSG00000053747 13 1.723 - - 0.929 0.794 - - SRY (sex determining region Y)-box 14 [Source:MGI Symbol;Acc:MGI:98362]
7. Slc6a5 ENSMUSG00000039728 13 1.722 - - 0.929 0.793 - - solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:MGI Symbol;Acc:MGI:105090]
8. Hes2 ENSMUSG00000028940 7 1.715 - - 0.929 - 0.786 - hes family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:1098624]
9. Vsx1 ENSMUSG00000033080 23 1.7 - - 0.929 - 0.771 - visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
10. Nkx1-2 ENSMUSG00000048528 9 1.666 - - 0.929 0.737 - - NK1 homeobox 2 [Source:MGI Symbol;Acc:MGI:104806]
11. Nek11 ENSMUSG00000035032 4 1.653 - - 0.929 0.724 - - NIMA (never in mitosis gene a)-related expressed kinase 11 [Source:MGI Symbol;Acc:MGI:2442276]
12. Gm12186 ENSMUSG00000084153 4 1.653 - - 0.929 0.724 - - predicted gene 12186 [Source:MGI Symbol;Acc:MGI:3649200]
13. 1700003M02Rik 1700003M02Rik 8 1.642 - 0.711 - - - 0.931
14. Gm15687 ENSMUSG00000086643 3 1.64 - 0.711 0.929 - - - predicted gene 15687 [Source:MGI Symbol;Acc:MGI:3783129]
15. 1110002J07Rik ENSMUSG00000097134 1 1.64 - 0.711 0.929 - - - RIKEN cDNA 1110002J07 gene [Source:MGI Symbol;Acc:MGI:1915738]
16. Rhov ENSMUSG00000034226 16 1.474 - 0.711 - - 0.763 - ras homolog family member V [Source:MGI Symbol;Acc:MGI:2444227]
17. Sncg ENSMUSG00000023064 1702 1.468 - - - - 0.720 0.748 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
18. BC064078 ENSMUSG00000087150 55 1.465 - - 0.749 - 0.716 - cDNA sequence BC064078 [Source:MGI Symbol;Acc:MGI:3040692]
19. Prdm8 ENSMUSG00000035456 310 1.456 - - 0.723 0.733 - - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
20. Wdr93 ENSMUSG00000039099 10 0.962 0.962 - - - - - WD repeat domain 93 [Source:MGI Symbol;Acc:MGI:3646885]
21. RP24-129O14.1 RP24-129O14.1 4 0.962 0.962 - - - - -
22. 5730457N03Rik 5730457N03Rik 14 0.948 - - 0.948 - - -
23. Klrc2 ENSMUSG00000052736 6 0.935 - - - - - 0.935 killer cell lectin-like receptor subfamily C, member 2 [Source:MGI Symbol;Acc:MGI:1336162]
24. Gm12591 ENSMUSG00000082831 8 0.931 - - - - - 0.931 predicted gene 12591 [Source:MGI Symbol;Acc:MGI:3649887]
25. Gm24455 ENSMUSG00000065282 4 0.931 - - - - - 0.931 predicted gene, 24455 [Source:MGI Symbol;Acc:MGI:5454232]
26. Gm6430 ENSMUSG00000044757 1 0.931 - - - - - 0.931 predicted gene 6430 [Source:MGI Symbol;Acc:MGI:3648857]
27. Tnf ENSMUSG00000024401 3 0.931 - - - - - 0.931 tumor necrosis factor [Source:MGI Symbol;Acc:MGI:104798]
28. Gm13611 ENSMUSG00000066068 16 0.931 - - - - - 0.931 predicted gene 13611 [Source:MGI Symbol;Acc:MGI:3651300]
29. Glod5 ENSMUSG00000031163 3 0.931 - - - - - 0.931 glyoxalase domain containing 5 [Source:MGI Symbol;Acc:MGI:1917074]
30. Gm15751 ENSMUSG00000086753 3 0.931 - - - - - 0.931 predicted gene 15751 [Source:MGI Symbol;Acc:MGI:3783193]
31. Gm15261 ENSMUSG00000087201 9 0.931 - - - - - 0.931 predicted gene 15261 [Source:MGI Symbol;Acc:MGI:3705201]
32. Gm26604 ENSMUSG00000097079 11 0.931 - - - - - 0.931 predicted gene, 26604 [Source:MGI Symbol;Acc:MGI:5477098]
33. Gm13620 ENSMUSG00000086603 1 0.931 - - - - - 0.931 predicted gene 13620 [Source:MGI Symbol;Acc:MGI:3650077]
34. Trim61 ENSMUSG00000109718 16 0.931 - - - - - 0.931 tripartite motif-containing 61 [Source:MGI Symbol;Acc:MGI:2387432]
35. Aldh8a1 ENSMUSG00000037542 5 0.931 - - - - - 0.931 aldehyde dehydrogenase 8 family, member A1 [Source:MGI Symbol;Acc:MGI:2653900]
36. Gm15825 ENSMUSG00000089787 24 0.931 - - - - - 0.931 predicted gene 15825 [Source:MGI Symbol;Acc:MGI:3801887]
37. Iglon5 ENSMUSG00000013367 30 0.931 - - - - - 0.931 IgLON family member 5 [Source:MGI Symbol;Acc:MGI:2686277]
38. Gm11476 ENSMUSG00000085596 1 0.931 - - - - - 0.931 predicted gene 11476 [Source:MGI Symbol;Acc:MGI:3705135]
39. Trhr ENSMUSG00000038760 1 0.931 - - - - - 0.931 thyrotropin releasing hormone receptor [Source:MGI Symbol;Acc:MGI:98824]
40. Htr1a ENSMUSG00000021721 2 0.931 - - - - - 0.931 5-hydroxytryptamine (serotonin) receptor 1A [Source:MGI Symbol;Acc:MGI:96273]
41. Gm26876 ENSMUSG00000097372 7 0.931 - - - - - 0.931 predicted gene, 26876 [Source:MGI Symbol;Acc:MGI:5477370]
42. Gm2155 ENSMUSG00000097288 4 0.931 - - - - - 0.931 predicted gene 2155 [Source:MGI Symbol;Acc:MGI:3780324]
43. Snora62 ENSMUSG00000064925 2 0.931 - - - - - 0.931 small nucleolar RNA, H/ACA box 62 [Source:MGI Symbol;Acc:MGI:2148179]
44. Gm12274 ENSMUSG00000083212 1 0.931 - - - - - 0.931 predicted gene 12274 [Source:MGI Symbol;Acc:MGI:3651758]
45. Il13ra2 ENSMUSG00000031289 1 0.931 - - - - - 0.931 interleukin 13 receptor, alpha 2 [Source:MGI Symbol;Acc:MGI:1277954]
46. Colq ENSMUSG00000057606 3 0.931 - - - - - 0.931 collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:MGI Symbol;Acc:MGI:1338761]
47. Slc26a1 ENSMUSG00000046959 24 0.931 - - - - - 0.931 solute carrier family 26 (sulfate transporter), member 1 [Source:MGI Symbol;Acc:MGI:2385894]
48. B230322F03Rik ENSMUSG00000097509 5 0.931 - - - - - 0.931 RIKEN cDNA B230322F03 gene [Source:MGI Symbol;Acc:MGI:3704291]
49. Vmn2r92 ENSMUSG00000091350 1 0.931 - - - - - 0.931 vomeronasal 2, receptor 92 [Source:MGI Symbol;Acc:MGI:3761352]
50. Gm14256 Gm14256 1 0.931 - - - - - 0.931
51. Inmt ENSMUSG00000003477 7 0.931 - - - - - 0.931 indolethylamine N-methyltransferase [Source:MGI Symbol;Acc:MGI:102963]
52. Gm15063 ENSMUSG00000086937 6 0.929 - - 0.929 - - - predicted gene 15063 [Source:MGI Symbol;Acc:MGI:3705169]
53. Gm13828 ENSMUSG00000083182 2 0.929 - - 0.929 - - - predicted gene 13828 [Source:MGI Symbol;Acc:MGI:3651756]
54. Gm27030 ENSMUSG00000098221 7 0.929 - - 0.929 - - - predicted gene, 27030 [Source:MGI Symbol;Acc:MGI:5504145]
55. Gm6781 ENSMUSG00000035129 10 0.929 - - 0.929 - - - predicted gene 6781 [Source:MGI Symbol;Acc:MGI:3644510]
56. 1700047K16Rik ENSMUSG00000087347 2 0.929 - - 0.929 - - - RIKEN cDNA 1700047K16 gene [Source:MGI Symbol;Acc:MGI:1920585]
57. Gm14131 ENSMUSG00000081470 0 0.929 - - 0.929 - - - predicted gene 14131 [Source:MGI Symbol;Acc:MGI:3652215]
58. Gm9945 ENSMUSG00000054450 2 0.929 - - 0.929 - - - predicted gene 9945 [Source:MGI Symbol;Acc:MGI:3641652]
59. Gm10390 ENSMUSG00000097368 4 0.929 - - 0.929 - - - predicted gene 10390 [Source:MGI Symbol;Acc:MGI:3708725]
60. Mir214 ENSMUSG00000065516 0 0.929 - - 0.929 - - - microRNA 214 [Source:MGI Symbol;Acc:MGI:2676890]
61. Gm15865 Gm15865 1 0.929 - - 0.929 - - -
62. Gm25360 ENSMUSG00000094655 11 0.929 - - 0.929 - - - predicted gene, 25360 [Source:MGI Symbol;Acc:MGI:5455137]
63. Npas1 ENSMUSG00000001988 1 0.929 - - 0.929 - - - neuronal PAS domain protein 1 [Source:MGI Symbol;Acc:MGI:109205]
64. 1700113H08Rik ENSMUSG00000047129 8 0.929 - - 0.929 - - - RIKEN cDNA 1700113H08 gene [Source:MGI Symbol;Acc:MGI:1923890]
65. Cd72 ENSMUSG00000028459 0 0.929 - - 0.929 - - - CD72 antigen [Source:MGI Symbol;Acc:MGI:88345]
66. Fam169b ENSMUSG00000074071 5 0.929 - - 0.929 - - - family with sequence similarity 169, member B [Source:MGI Symbol;Acc:MGI:3644026]
67. 4930586N03Rik ENSMUSG00000087097 0 0.929 - - 0.929 - - - RIKEN cDNA 4930586N03 gene [Source:MGI Symbol;Acc:MGI:1923137]
68. Zkscan16 ENSMUSG00000038630 0 0.929 - - 0.929 - - - zinc finger with KRAB and SCAN domains 16 [Source:MGI Symbol;Acc:MGI:3510405]
69. Serpinc1 ENSMUSG00000026715 40 0.929 - - 0.929 - - - serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 [Source:MGI Symbol;Acc:MGI:88095]
70. Gm6356 ENSMUSG00000091400 0 0.929 - - 0.929 - - - predicted gene 6356 [Source:MGI Symbol;Acc:MGI:3646390]
71. 4833428L15Rik ENSMUSG00000097074 0 0.929 - - 0.929 - - - RIKEN cDNA 4833428L15 gene [Source:MGI Symbol;Acc:MGI:1921852]
72. Gm20621 ENSMUSG00000093394 10 0.929 - - 0.929 - - - predicted gene 20621 [Source:MGI Symbol;Acc:MGI:5313068]
73. Sp9 ENSMUSG00000068859 60 0.929 - - 0.929 - - - trans-acting transcription factor 9 [Source:MGI Symbol;Acc:MGI:3574660]
74. AI317395 AI317395 2 0.929 - - 0.929 - - -
75. Gm13904 ENSMUSG00000082066 4 0.929 - - 0.929 - - - predicted gene 13904 [Source:MGI Symbol;Acc:MGI:3651201]
76. 4930519F16Rik ENSMUSG00000031325 7 0.929 - - 0.929 - - - RIKEN cDNA 4930519F16 gene [Source:MGI Symbol;Acc:MGI:1922356]
77. Gm20649 ENSMUSG00000093662 1 0.929 - - 0.929 - - - predicted gene 20649 [Source:MGI Symbol;Acc:MGI:5313096]
78. 9630001P10Rik ENSMUSG00000097825 4 0.929 - - 0.929 - - - RIKEN cDNA 9630001P10 gene [Source:MGI Symbol;Acc:MGI:2441755]
79. Kcne1 ENSMUSG00000039639 6 0.929 - - 0.929 - - - potassium voltage-gated channel, Isk-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96673]
80. Amer3 ENSMUSG00000045174 9 0.929 - - 0.929 - - - APC membrane recruitment 3 [Source:MGI Symbol;Acc:MGI:3026939]
81. Aqp3 ENSMUSG00000028435 17 0.929 - - 0.929 - - - aquaporin 3 [Source:MGI Symbol;Acc:MGI:1333777]
82. 4932418E24Rik 4932418E24Rik 0 0.929 - - 0.929 - - -
83. Lsmem1 ENSMUSG00000071342 24 0.929 - - 0.929 - - - leucine-rich single-pass membrane protein 1 [Source:MGI Symbol;Acc:MGI:2685735]
84. Uts2r ENSMUSG00000039321 8 0.929 - - 0.929 - - - urotensin 2 receptor [Source:MGI Symbol;Acc:MGI:2183450]
85. Gm5499 ENSMUSG00000071035 0 0.929 - - 0.929 - - - predicted pseudogene 5499 [Source:MGI Symbol;Acc:MGI:3643804]
86. 4931409K22Rik ENSMUSG00000038199 1 0.929 - - 0.929 - - - RIKEN cDNA 4931409K22 gene [Source:MGI Symbol;Acc:MGI:3045319]
87. Asb10 ENSMUSG00000038204 5 0.929 - - 0.929 - - - ankyrin repeat and SOCS box-containing 10 [Source:MGI Symbol;Acc:MGI:2152836]
88. 2310043M15Rik ENSMUSG00000097768 0 0.929 - - 0.929 - - - RIKEN cDNA 2310043M15 gene [Source:MGI Symbol;Acc:MGI:1919180]
89. Gm13206 ENSMUSG00000087027 0 0.929 - - 0.929 - - - predicted gene 13206 [Source:MGI Symbol;Acc:MGI:3651440]
90. Trim69 ENSMUSG00000033368 3 0.929 - - 0.929 - - - tripartite motif-containing 69 [Source:MGI Symbol;Acc:MGI:1918178]
91. Gm15556 ENSMUSG00000085932, ENSMUSG00000116313 4 0.929 - - 0.929 - - - predicted gene 15556 [Source:MGI Symbol;Acc:MGI:3783005]
92. Vmn1r4 ENSMUSG00000071893 3 0.929 - - 0.929 - - - vomeronasal 1 receptor 4 [Source:MGI Symbol;Acc:MGI:2159457]
93. Plin1 ENSMUSG00000030546 0 0.929 - - 0.929 - - - perilipin 1 [Source:MGI Symbol;Acc:MGI:1890505]
94. Csf3 ENSMUSG00000038067 0 0.929 - - 0.929 - - - colony stimulating factor 3 (granulocyte) [Source:MGI Symbol;Acc:MGI:1339751]
95. Akr1b7 ENSMUSG00000052131 2 0.929 - - 0.929 - - - aldo-keto reductase family 1, member B7 [Source:MGI Symbol;Acc:MGI:101918]
96. Gm11837 ENSMUSG00000086587 10 0.929 - - 0.929 - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
97. Gm15440 Gm15440 1 0.929 - - 0.929 - - -
98. Cd9-ps ENSMUSG00000092193 1 0.929 - - 0.929 - - - Cd9 antigen, pseudogene [Source:MGI Symbol;Acc:MGI:3645134]
99. Chat ENSMUSG00000021919 22 0.929 - - 0.929 - - - choline acetyltransferase [Source:MGI Symbol;Acc:MGI:88392]
100. Gm26994 ENSMUSG00000098075 2 0.929 - - 0.929 - - - predicted gene, 26994 [Source:MGI Symbol;Acc:MGI:5504109]

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA