Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vsx1

Gene Name Gene ID Reads Annotation
Vsx1 ENSMUSG00000033080 23 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]







Genes with expression patterns similar to Vsx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vsx1 ENSMUSG00000033080 23 6 1.000 1.000 1.000 1.000 1.000 1.000 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
2. Foxn4 ENSMUSG00000042002 22 2.511 - - 1.000 0.733 0.778 - forkhead box N4 [Source:MGI Symbol;Acc:MGI:2151057]
3. Hes2 ENSMUSG00000028940 7 1.837 - - 1.000 - 0.837 - hes family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:1098624]
4. Glra2 ENSMUSG00000018589 17 1.748 - - 1.000 0.748 - - glycine receptor, alpha 2 subunit [Source:MGI Symbol;Acc:MGI:95748]
5. Gm12866 ENSMUSG00000066060 3 1.721 1.000 - - - 0.721 - predicted gene 12866 [Source:MGI Symbol;Acc:MGI:3649462]
6. Vsx2 ENSMUSG00000021239 34 1.7 - - 0.929 - 0.771 - visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
7. Gm12098 ENSMUSG00000082078 4 1.608 0.883 - 0.725 - - - predicted gene 12098 [Source:MGI Symbol;Acc:MGI:3651581]
8. Sncg ENSMUSG00000023064 1702 1.556 - - - - 0.746 0.810 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
9. 3110035E14Rik 204 1.502 - - 0.771 - 0.731 - RIKEN cDNA 3110035E14 gene
10. Fam57b ENSMUSG00000058966 243 1.481 - - - - 0.769 0.712 family with sequence similarity 57, member B [Source:MGI Symbol;Acc:MGI:1916202]
11. Rab3c ENSMUSG00000021700 370 1.476 - - - 0.741 - 0.735 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
12. Elmod1 ENSMUSG00000041986 75 1.465 - - - - 0.734 0.731 ELMO/CED-12 domain containing 1 [Source:MGI Symbol;Acc:MGI:3583900]
13. Prdm8 ENSMUSG00000035456 310 1.442 - - 0.722 - 0.720 - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
14. Gm15809 ENSMUSG00000090135 2 1 1.000 - - - - - predicted gene 15809 [Source:MGI Symbol;Acc:MGI:3802046]
15. Gm3644 Gm3644 2 1 1.000 - - - - -
16. Gm5468 ENSMUSG00000056089 9 1 - - 1.000 - - - predicted gene 5468 [Source:MGI Symbol;Acc:MGI:3648948]
17. Tcp1-ps1 ENSMUSG00000081231 0 1 - - 1.000 - - - t-complex protein 1, pseudogene 1 [Source:MGI Symbol;Acc:MGI:98536]
18. Gm23547 ENSMUSG00000088835 11 1 1.000 - - - - - predicted gene, 23547 [Source:MGI Symbol;Acc:MGI:5453324]
19. Nxnl1 ENSMUSG00000034829 6 1 - - 1.000 - - - nucleoredoxin-like 1 [Source:MGI Symbol;Acc:MGI:1924446]
20. Nkx1-2 ENSMUSG00000048528 9 1 - - 1.000 - - - NK1 homeobox 2 [Source:MGI Symbol;Acc:MGI:104806]
21. Gm5466 ENSMUSG00000083397 4 1 - - 1.000 - - - predicted gene 5466 [Source:MGI Symbol;Acc:MGI:3647828]
22. 2310042E22Rik 2310042E22Rik 17 1 1.000 - - - - -
23. Gm26594 ENSMUSG00000097189 7 1 - - 1.000 - - - predicted gene, 26594 [Source:MGI Symbol;Acc:MGI:5477088]
24. Gm1553 ENSMUSG00000094186 1 1 1.000 - - - - - predicted gene 1553 [Source:MGI Symbol;Acc:MGI:2686399]
25. Gm19203 ENSMUSG00000092376 1 1 1.000 - - - - - predicted gene, 19203 [Source:MGI Symbol;Acc:MGI:5011388]
26. Tnfsf10 ENSMUSG00000039304 1 1 1.000 - - - - - tumor necrosis factor (ligand) superfamily, member 10 [Source:MGI Symbol;Acc:MGI:107414]
27. Snord35b ENSMUSG00000064767 0 1 - - 1.000 - - - small nucleolar RNA, C/D box 35B [Source:MGI Symbol;Acc:MGI:1351321]
28. Cecr6 20 1 1.000 - - - - - cat eye syndrome chromosome region, candidate 6
29. Gm10524 ENSMUSG00000097141 2 1 - - 1.000 - - - predicted gene 10524 [Source:MGI Symbol;Acc:MGI:3642791]
30. Gm10417 ENSMUSG00000103580 12 1 - - 1.000 - - - predicted gene 10417 [Source:MGI Symbol;Acc:MGI:3642677]
31. Gm7638 ENSMUSG00000080790 1 1 - - 1.000 - - - predicted gene 7638 [Source:MGI Symbol;Acc:MGI:3643470]
32. Gnat3 ENSMUSG00000028777 6 1 - - 1.000 - - - guanine nucleotide binding protein, alpha transducing 3 [Source:MGI Symbol;Acc:MGI:3588268]
33. Terc ENSMUSG00000064796 2 1 - - 1.000 - - - telomerase RNA component [Source:MGI Symbol;Acc:MGI:109558]
34. F7 ENSMUSG00000031443 10 1 1.000 - - - - - coagulation factor VII [Source:MGI Symbol;Acc:MGI:109325]
35. Gm11127 ENSMUSG00000079492 17 1 1.000 - - - - - predicted gene 11127 [Source:MGI Symbol;Acc:MGI:3779381]
36. Wdr66 ENSMUSG00000029442 10 1 - - 1.000 - - - WD repeat domain 66 [Source:MGI Symbol;Acc:MGI:1918495]
37. Rps12-ps12 ENSMUSG00000093990 0 1 - - 1.000 - - - ribosomal protein S12, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3646874]
38. 4930417O22Rik ENSMUSG00000071818 0 1 - - 1.000 - - - RIKEN cDNA 4930417O22 gene [Source:MGI Symbol;Acc:MGI:1921137]
39. Gm17196 ENSMUSG00000090708 11 1 - - 1.000 - - - predicted gene 17196 [Source:MGI Symbol;Acc:MGI:4938023]
40. Tmem232 ENSMUSG00000045036 0 1 - - 1.000 - - - transmembrane protein 232 [Source:MGI Symbol;Acc:MGI:2685786]
41. Gm10439 ENSMUSG00000072923 1 1 1.000 - - - - - predicted gene 10439 [Source:MGI Symbol;Acc:MGI:3710525]
42. Ghrh ENSMUSG00000027643 0 1 - - 1.000 - - - growth hormone releasing hormone [Source:MGI Symbol;Acc:MGI:95709]
43. 2410088K16Rik 2410088K16Rik 5 1 1.000 - - - - -
44. Gm15627 ENSMUSG00000087344 6 1 - - 1.000 - - - predicted gene 15627 [Source:MGI Symbol;Acc:MGI:3783071]
45. Odf3b ENSMUSG00000047394 4 1 - - 1.000 - - - outer dense fiber of sperm tails 3B [Source:MGI Symbol;Acc:MGI:1917363]
46. Eomes ENSMUSG00000032446 9 1 1.000 - - - - - eomesodermin [Source:MGI Symbol;Acc:MGI:1201683]
47. Gm24044 ENSMUSG00000065041 3 1 - - 1.000 - - - predicted gene, 24044 [Source:MGI Symbol;Acc:MGI:5453821]
48. Slc25a48 ENSMUSG00000021509 9 1 1.000 - - - - - solute carrier family 25, member 48 [Source:MGI Symbol;Acc:MGI:2145373]
49. Gm17151 ENSMUSG00000075558 1 1 - - 1.000 - - - predicted gene 17151 [Source:MGI Symbol;Acc:MGI:4937978]
50. Etos1 ENSMUSG00000050189 4 1 - - 1.000 - - - ectopic ossification 1 [Source:MGI Symbol;Acc:MGI:2149837]
51. Gm20703 ENSMUSG00000093622 1 1 - - 1.000 - - - predicted gene 20703 [Source:MGI Symbol;Acc:MGI:5313150]
52. Gm7180 ENSMUSG00000083774 1 1 - - 1.000 - - - predicted pseudogene 7180 [Source:MGI Symbol;Acc:MGI:3648560]
53. A930009A15Rik ENSMUSG00000092210 2 1 - - 1.000 - - - RIKEN cDNA A930009A15 gene [Source:MGI Symbol;Acc:MGI:1925048]
54. Vmn1r4 ENSMUSG00000071893 3 1 - - 1.000 - - - vomeronasal 1 receptor 4 [Source:MGI Symbol;Acc:MGI:2159457]
55. Gm15556 ENSMUSG00000085932, ENSMUSG00000116313 4 1 - - 1.000 - - - predicted gene 15556 [Source:MGI Symbol;Acc:MGI:3783005]
56. Gm25099 ENSMUSG00000095676 10 1 1.000 - - - - - predicted gene, 25099 [Source:MGI Symbol;Acc:MGI:5454876]
57. Trim69 ENSMUSG00000033368 3 1 - - 1.000 - - - tripartite motif-containing 69 [Source:MGI Symbol;Acc:MGI:1918178]
58. Gm13206 ENSMUSG00000087027 0 1 - - 1.000 - - - predicted gene 13206 [Source:MGI Symbol;Acc:MGI:3651440]
59. Abcc8 ENSMUSG00000040136 63 1 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:MGI Symbol;Acc:MGI:1352629]
60. Gm26994 ENSMUSG00000098075 2 1 - - 1.000 - - - predicted gene, 26994 [Source:MGI Symbol;Acc:MGI:5504109]
61. Chat ENSMUSG00000021919 22 1 - - 1.000 - - - choline acetyltransferase [Source:MGI Symbol;Acc:MGI:88392]
62. Gm17750 ENSMUSG00000098087 25 1 1.000 - - - - - predicted gene, 17750 [Source:MGI Symbol;Acc:MGI:5009828]
63. Cd9-ps ENSMUSG00000092193 1 1 - - 1.000 - - - Cd9 antigen, pseudogene [Source:MGI Symbol;Acc:MGI:3645134]
64. Gm15440 Gm15440 1 1 - - 1.000 - - -
65. Gm11837 ENSMUSG00000086587 10 1 - - 1.000 - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
66. Gm11410 ENSMUSG00000083219 1 1 1.000 - - - - - predicted gene 11410 [Source:MGI Symbol;Acc:MGI:3652015]
67. Csf3 ENSMUSG00000038067 0 1 - - 1.000 - - - colony stimulating factor 3 (granulocyte) [Source:MGI Symbol;Acc:MGI:1339751]
68. Akr1b7 ENSMUSG00000052131 2 1 - - 1.000 - - - aldo-keto reductase family 1, member B7 [Source:MGI Symbol;Acc:MGI:101918]
69. Plin1 ENSMUSG00000030546 0 1 - - 1.000 - - - perilipin 1 [Source:MGI Symbol;Acc:MGI:1890505]
70. Ace ENSMUSG00000020681 11 1 - - 1.000 - - - angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:MGI Symbol;Acc:MGI:87874]
71. Rps12-ps1 ENSMUSG00000082746 6 1 - - 1.000 - - - ribosomal protein S12, pseudogene 1 [Source:MGI Symbol;Acc:MGI:1353638]
72. 4933422H20Rik 4933422H20Rik 7 1 1.000 - - - - -
73. Epgn ENSMUSG00000035020 17 1 - - 1.000 - - - epithelial mitogen [Source:MGI Symbol;Acc:MGI:1919170]
74. Gm26397 ENSMUSG00000065637 1 1 1.000 - - - - - predicted gene, 26397 [Source:MGI Symbol;Acc:MGI:5456174]
75. Abhd12b ENSMUSG00000090121 5 1 - - 1.000 - - - abhydrolase domain containing 12B [Source:MGI Symbol;Acc:MGI:2685650]
76. Mlph ENSMUSG00000026303 8 1 - - 1.000 - - - melanophilin [Source:MGI Symbol;Acc:MGI:2176380]
77. Gm8062 ENSMUSG00000066714 4 1 - - 1.000 - - - predicted pseudogene 8062 [Source:MGI Symbol;Acc:MGI:3643433]
78. C530050E15Rik ENSMUSG00000097838 2 1 - - 1.000 - - - RIKEN cDNA C530050E15 gene [Source:MGI Symbol;Acc:MGI:2444135]
79. Gm15179 ENSMUSG00000085653 2 1 - - 1.000 - - - predicted gene 15179 [Source:MGI Symbol;Acc:MGI:3705125]
80. Krt1 ENSMUSG00000046834 15 1 1.000 - - - - - keratin 1 [Source:MGI Symbol;Acc:MGI:96698]
81. Ropn1 ENSMUSG00000022832 0 1 - - 1.000 - - - ropporin, rhophilin associated protein 1 [Source:MGI Symbol;Acc:MGI:1923628]
82. Oas1e ENSMUSG00000066867 1 1 1.000 - - - - - 2'-5' oligoadenylate synthetase 1E [Source:MGI Symbol;Acc:MGI:2180856]
83. Gm16638 ENSMUSG00000087088 1 1 - - 1.000 - - - predicted gene, 16638 [Source:MGI Symbol;Acc:MGI:4439562]
84. Mmp25 ENSMUSG00000023903 6 1 1.000 - - - - - matrix metallopeptidase 25 [Source:MGI Symbol;Acc:MGI:2443938]
85. Gm15472 ENSMUSG00000084760 0 1 - - 1.000 - - - predicted gene 15472 [Source:MGI Symbol;Acc:MGI:3707328]
86. Cst7 ENSMUSG00000068129 1 1 - - 1.000 - - - cystatin F (leukocystatin) [Source:MGI Symbol;Acc:MGI:1298217]
87. Gm13904 ENSMUSG00000082066 4 1 - - 1.000 - - - predicted gene 13904 [Source:MGI Symbol;Acc:MGI:3651201]
88. Gm16129 ENSMUSG00000085290 1 1 1.000 - - - - - predicted gene 16129 [Source:MGI Symbol;Acc:MGI:3801947]
89. Gtf2a1l ENSMUSG00000024154 7 1 1.000 - - - - - general transcription factor IIA, 1-like [Source:MGI Symbol;Acc:MGI:1919078]
90. Gm12186 ENSMUSG00000084153 4 1 - - 1.000 - - - predicted gene 12186 [Source:MGI Symbol;Acc:MGI:3649200]
91. AI317395 AI317395 2 1 - - 1.000 - - -
92. Sp9 ENSMUSG00000068859 60 1 - - 1.000 - - - trans-acting transcription factor 9 [Source:MGI Symbol;Acc:MGI:3574660]
93. Gm15687 ENSMUSG00000086643 3 1 - - 1.000 - - - predicted gene 15687 [Source:MGI Symbol;Acc:MGI:3783129]
94. Gm20621 ENSMUSG00000093394 10 1 - - 1.000 - - - predicted gene 20621 [Source:MGI Symbol;Acc:MGI:5313068]
95. 6430562O15Rik ENSMUSG00000097828 27 1 1.000 - - - - - RIKEN cDNA 6430562O15 gene [Source:MGI Symbol;Acc:MGI:2444982]
96. Gm20636 ENSMUSG00000093637 1 1 1.000 - - - - - predicted gene 20636 [Source:MGI Symbol;Acc:MGI:5313083]
97. Rrad ENSMUSG00000031880 27 1 1.000 - - - - - Ras-related associated with diabetes [Source:MGI Symbol;Acc:MGI:1930943]
98. 9630001P10Rik ENSMUSG00000097825 4 1 - - 1.000 - - - RIKEN cDNA 9630001P10 gene [Source:MGI Symbol;Acc:MGI:2441755]
99. Gm20649 ENSMUSG00000093662 1 1 - - 1.000 - - - predicted gene 20649 [Source:MGI Symbol;Acc:MGI:5313096]
100. 4930519F16Rik ENSMUSG00000031325 7 1 - - 1.000 - - - RIKEN cDNA 4930519F16 gene [Source:MGI Symbol;Acc:MGI:1922356]

There are 238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA