Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vbp1

Gene Name Gene ID Reads Annotation
Vbp1 ENSMUSG00000031197 4851 von Hippel-Lindau binding protein 1 [Source:MGI Symbol;Acc:MGI:1333804]







Genes with expression patterns similar to Vbp1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vbp1 ENSMUSG00000031197 4851 6 1.000 1.000 1.000 1.000 1.000 1.000 von Hippel-Lindau binding protein 1 [Source:MGI Symbol;Acc:MGI:1333804]
2. Mapk1 ENSMUSG00000063358 8354 0.844 - 0.844 - - - - mitogen-activated protein kinase 1 [Source:MGI Symbol;Acc:MGI:1346858]
3. Clptm1l ENSMUSG00000021610 2055 0.821 - 0.821 - - - - CLPTM1-like [Source:MGI Symbol;Acc:MGI:2442892]
4. Morf4l1 ENSMUSG00000062270 33629 0.807 - - 0.807 - - - mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
5. Elavl2 ENSMUSG00000008489 2109 0.806 - - 0.806 - - - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
6. Smim15 ENSMUSG00000071180 3604 0.804 - 0.804 - - - - small integral membrane protein 15 [Source:MGI Symbol;Acc:MGI:1922866]
7. Gm17259 ENSMUSG00000097793 132 0.804 - - 0.804 - - - predicted gene, 17259 [Source:MGI Symbol;Acc:MGI:4936893]
8. Cep57 ENSMUSG00000031922 2403 0.789 - - 0.789 - - - centrosomal protein 57 [Source:MGI Symbol;Acc:MGI:1915551]
9. Fam115a Fam115a 5095 0.787 - 0.787 - - - -
10. Brpf1 ENSMUSG00000001632 2400 0.786 - 0.786 - - - - bromodomain and PHD finger containing, 1 [Source:MGI Symbol;Acc:MGI:1926033]
11. Mycl ENSMUSG00000028654 904 0.782 - 0.782 - - - - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
12. Nhp2 ENSMUSG00000001056 4557 0.781 - 0.781 - - - - NHP2 ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1098547]
13. Bscl2 ENSMUSG00000071657 1974 0.777 - 0.777 - - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:MGI Symbol;Acc:MGI:1298392]
14. Sptbn2 ENSMUSG00000067889 4571 0.777 - 0.777 - - - - spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
15. Naa50 ENSMUSG00000022698 7380 0.774 - 0.774 - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:MGI Symbol;Acc:MGI:1919367]
16. Ccdc36 ENSMUSG00000047220 4976 0.773 - - 0.773 - - - coiled-coil domain containing 36 [Source:MGI Symbol;Acc:MGI:3612242]
17. Pbx2 ENSMUSG00000034673 2955 0.773 - 0.773 - - - - pre B cell leukemia homeobox 2 [Source:MGI Symbol;Acc:MGI:1341793]
18. Gm16286 ENSMUSG00000024571 1617 0.772 - 0.772 - - - - predicted gene 16286 [Source:MGI Symbol;Acc:MGI:3833940]
19. Reps1 ENSMUSG00000019854 1546 0.772 - 0.772 - - - - RalBP1 associated Eps domain containing protein [Source:MGI Symbol;Acc:MGI:1196373]
20. Cope ENSMUSG00000055681 1600 0.769 - 0.769 - - - - coatomer protein complex, subunit epsilon [Source:MGI Symbol;Acc:MGI:1891702]
21. Camta1 ENSMUSG00000014592 3380 0.768 - 0.768 - - - - calmodulin binding transcription activator 1 [Source:MGI Symbol;Acc:MGI:2140230]
22. Sep-03 Sep-03 2764 0.767 - 0.767 - - - -
23. Rnf165 ENSMUSG00000025427 2394 0.767 - 0.767 - - - - ring finger protein 165 [Source:MGI Symbol;Acc:MGI:2444521]
24. Chtop ENSMUSG00000001017 4591 0.767 - 0.767 - - - - chromatin target of PRMT1 [Source:MGI Symbol;Acc:MGI:1913761]
25. Zfp326 ENSMUSG00000029290 3642 0.766 - 0.766 - - - - zinc finger protein 326 [Source:MGI Symbol;Acc:MGI:1927246]
26. Scrn3 ENSMUSG00000008226 1435 0.766 - 0.766 - - - - secernin 3 [Source:MGI Symbol;Acc:MGI:1921866]
27. Tm2d2 ENSMUSG00000031556 2066 0.766 - 0.766 - - - - TM2 domain containing 2 [Source:MGI Symbol;Acc:MGI:1916992]
28. Gm24507 ENSMUSG00000088308 74 0.765 - - 0.765 - - - predicted gene, 24507 [Source:MGI Symbol;Acc:MGI:5454284]
29. Zeb2 ENSMUSG00000026872 5611 0.763 - 0.763 - - - - zinc finger E-box binding homeobox 2 [Source:MGI Symbol;Acc:MGI:1344407]
30. Traf7 ENSMUSG00000052752 5066 0.762 - 0.762 - - - - TNF receptor-associated factor 7 [Source:MGI Symbol;Acc:MGI:3042141]
31. Cops2 ENSMUSG00000027206 5541 0.762 - 0.762 - - - - COP9 signalosome subunit 2 [Source:MGI Symbol;Acc:MGI:1330276]
32. Ppat ENSMUSG00000029246 1730 0.76 - 0.760 - - - - phosphoribosyl pyrophosphate amidotransferase [Source:MGI Symbol;Acc:MGI:2387203]
33. Setd8 Setd8 3587 0.758 - 0.758 - - - -
34. Nup37 ENSMUSG00000035351 2174 0.757 - 0.757 - - - - nucleoporin 37 [Source:MGI Symbol;Acc:MGI:1919964]
35. Zfp518a ENSMUSG00000049164 1198 0.756 - 0.756 - - - - zinc finger protein 518A [Source:MGI Symbol;Acc:MGI:1919922]
36. Plxna3 ENSMUSG00000031398 910 0.754 - 0.754 - - - - plexin A3 [Source:MGI Symbol;Acc:MGI:107683]
37. Cript ENSMUSG00000024146 2236 0.753 - 0.753 - - - - cysteine-rich PDZ-binding protein [Source:MGI Symbol;Acc:MGI:1929655]
38. Gramd1a ENSMUSG00000001248 2162 0.751 - 0.751 - - - - GRAM domain containing 1A [Source:MGI Symbol;Acc:MGI:105490]
39. Acsl6 ENSMUSG00000020333 249 0.751 - - 0.751 - - - acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
40. Gm14966 ENSMUSG00000079467, ENSMUSG00000107250 141 0.75 - - 0.750 - - - predicted gene 14966 [Source:MGI Symbol;Acc:MGI:3705223]
41. Scyl2 ENSMUSG00000069539 1275 0.748 - 0.748 - - - - SCY1-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1289172]
42. Kti12 ENSMUSG00000073775 1671 0.747 - 0.747 - - - - KTI12 homolog, chromatin associated [Source:MGI Symbol;Acc:MGI:1923547]
43. Dnajc8 ENSMUSG00000054405 10977 0.747 - 0.747 - - - - DnaJ heat shock protein family (Hsp40) member C8 [Source:MGI Symbol;Acc:MGI:1915848]
44. Suv39h2 ENSMUSG00000026646 2030 0.746 - 0.746 - - - - suppressor of variegation 3-9 2 [Source:MGI Symbol;Acc:MGI:1890396]
45. Sbk1 ENSMUSG00000042978 3908 0.746 - - - - 0.746 - SH3-binding kinase 1 [Source:MGI Symbol;Acc:MGI:2135937]
46. 2210016F16Rik ENSMUSG00000021550 975 0.745 - 0.745 - - - - RIKEN cDNA 2210016F16 gene [Source:MGI Symbol;Acc:MGI:1917403]
47. Smg1 ENSMUSG00000030655 6079 0.744 - 0.744 - - - - SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:MGI Symbol;Acc:MGI:1919742]
48. Lphn2 Lphn2 6084 0.744 - 0.744 - - - -
49. Mettl17 ENSMUSG00000004561 924 0.743 - 0.743 - - - - methyltransferase like 17 [Source:MGI Symbol;Acc:MGI:1098577]
50. Ranbp17 ENSMUSG00000040594 358 0.743 - - 0.743 - - - RAN binding protein 17 [Source:MGI Symbol;Acc:MGI:1929706]
51. Lrrc8a ENSMUSG00000007476 3202 0.742 - 0.742 - - - - leucine rich repeat containing 8A [Source:MGI Symbol;Acc:MGI:2652847]
52. Hoxa9 ENSMUSG00000038227 2175 0.742 - 0.742 - - - - homeobox A9 [Source:MGI Symbol;Acc:MGI:96180]
53. Tpr ENSMUSG00000006005 4170 0.741 - 0.741 - - - - translocated promoter region, nuclear basket protein [Source:MGI Symbol;Acc:MGI:1922066]
54. Rps15a-ps6 ENSMUSG00000083022 1541 0.739 - - 0.739 - - - ribosomal protein S15A, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3650298]
55. Cdc73 ENSMUSG00000026361 2326 0.738 - 0.738 - - - - cell division cycle 73, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:2384876]
56. Tsr1 ENSMUSG00000038335 1073 0.738 - 0.738 - - - - TSR1 20S rRNA accumulation [Source:MGI Symbol;Acc:MGI:2144566]
57. Phf17 Phf17 2938 0.738 - 0.738 - - - -
58. Bola3 ENSMUSG00000045160 1800 0.737 - 0.737 - - - - bolA-like 3 (E. coli) [Source:MGI Symbol;Acc:MGI:1925903]
59. Lonp1 ENSMUSG00000041168 2279 0.737 - 0.737 - - - - lon peptidase 1, mitochondrial [Source:MGI Symbol;Acc:MGI:1921392]
60. Csnk2a1 ENSMUSG00000074698 11115 0.737 - 0.737 - - - - casein kinase 2, alpha 1 polypeptide [Source:MGI Symbol;Acc:MGI:88543]
61. Arl6ip6 ENSMUSG00000026960 1648 0.737 - 0.737 - - - - ADP-ribosylation factor-like 6 interacting protein 6 [Source:MGI Symbol;Acc:MGI:1929507]
62. 2210015D19Rik 2210015D19Rik 1089 0.736 - 0.736 - - - -
63. Ndufs6 ENSMUSG00000021606 4418 0.735 - 0.735 - - - - NADH:ubiquinone oxidoreductase core subunit S6 [Source:MGI Symbol;Acc:MGI:107932]
64. Rnf19a ENSMUSG00000022280 802 0.735 - 0.735 - - - - ring finger protein 19A [Source:MGI Symbol;Acc:MGI:1353623]
65. Rras2 ENSMUSG00000055723 3015 0.734 - 0.734 - - - - related RAS viral (r-ras) oncogene 2 [Source:MGI Symbol;Acc:MGI:1914172]
66. Cacna2d1 ENSMUSG00000040118 2307 0.734 - 0.734 - - - - calcium channel, voltage-dependent, alpha2/delta subunit 1 [Source:MGI Symbol;Acc:MGI:88295]
67. Srrm1 ENSMUSG00000028809 4875 0.734 - 0.734 - - - - serine/arginine repetitive matrix 1 [Source:MGI Symbol;Acc:MGI:1858303]
68. 6330416G13Rik 684 0.733 - 0.733 - - - - RIKEN cDNA 6330416G13 gene, transcript variant X5
69. Rpl10a-ps1 ENSMUSG00000084416 5813 0.733 - 0.733 - - - - ribosomal protein L10A, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3705885]
70. Cstf2t ENSMUSG00000053536 5496 0.733 - 0.733 - - - - cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Source:MGI Symbol;Acc:MGI:1932622]
71. Tbc1d9 ENSMUSG00000031709 688 0.732 - 0.732 - - - - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
72. E2f1 ENSMUSG00000027490 2357 0.732 - 0.732 - - - - E2F transcription factor 1 [Source:MGI Symbol;Acc:MGI:101941]
73. Avl9 ENSMUSG00000029787 1346 0.732 - 0.732 - - - - AVL9 cell migration associated [Source:MGI Symbol;Acc:MGI:1926187]
74. Zfp106 ENSMUSG00000027288 2359 0.731 - 0.731 - - - - zinc finger protein 106 [Source:MGI Symbol;Acc:MGI:1270153]
75. Ttc32 ENSMUSG00000066637 598 0.731 - - 0.731 - - - tetratricopeptide repeat domain 32 [Source:MGI Symbol;Acc:MGI:1922766]
76. Med6 ENSMUSG00000002679 2465 0.731 - 0.731 - - - - mediator complex subunit 6 [Source:MGI Symbol;Acc:MGI:1917042]
77. Rab6b ENSMUSG00000032549 1005 0.731 - 0.731 - - - - RAB6B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:107283]
78. Impa2 ENSMUSG00000024525 709 0.731 - 0.731 - - - - inositol (myo)-1(or 4)-monophosphatase 2 [Source:MGI Symbol;Acc:MGI:2149728]
79. 2810408I11Rik ENSMUSG00000087213 916 0.731 - 0.731 - - - - RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
80. Atp6v1a ENSMUSG00000052459 6222 0.731 - 0.731 - - - - ATPase, H+ transporting, lysosomal V1 subunit A [Source:MGI Symbol;Acc:MGI:1201780]
81. Nudt11 ENSMUSG00000073295 757 0.73 - 0.730 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
82. Hspa8 ENSMUSG00000015656 1860 0.73 - 0.730 - - - - heat shock protein 8 [Source:MGI Symbol;Acc:MGI:105384]
83. Extl2 ENSMUSG00000027963 931 0.729 - - - - 0.729 - exostoses (multiple)-like 2 [Source:MGI Symbol;Acc:MGI:1889574]
84. Bbs2 ENSMUSG00000031755 976 0.728 - 0.728 - - - - Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
85. Pdcd2 ENSMUSG00000014771 871 0.728 - 0.728 - - - - programmed cell death 2 [Source:MGI Symbol;Acc:MGI:104643]
86. Pank2 ENSMUSG00000037514 1182 0.728 - 0.728 - - - - pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
87. Pfdn4 ENSMUSG00000052033 2812 0.728 - 0.728 - - - - prefoldin 4 [Source:MGI Symbol;Acc:MGI:1923512]
88. Gm24289 ENSMUSG00000088254 108 0.727 - - 0.727 - - - predicted gene, 24289 [Source:MGI Symbol;Acc:MGI:5454066]
89. Rpl13a ENSMUSG00000074129 29575 0.727 - - 0.727 - - - ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
90. Ccnjl ENSMUSG00000044707 2735 0.726 - 0.726 - - - - cyclin J-like [Source:MGI Symbol;Acc:MGI:2685723]
91. 2010012O05Rik 2010012O05Rik 1288 0.726 - 0.726 - - - -
92. Pde12 ENSMUSG00000043702, ENSMUSG00000116251 1434 0.726 - 0.726 - - - - phosphodiesterase 12 [Source:MGI Symbol;Acc:MGI:2443226]
93. Minos1 ENSMUSG00000050608 7246 0.726 - 0.726 - - - - mitochondrial inner membrane organizing system 1 [Source:MGI Symbol;Acc:MGI:1913628]
94. Mrpl13 ENSMUSG00000022370 4604 0.725 - 0.725 - - - - mitochondrial ribosomal protein L13 [Source:MGI Symbol;Acc:MGI:2137218]
95. Dnajc12 ENSMUSG00000036764 649 0.725 - - 0.725 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:MGI Symbol;Acc:MGI:1353428]
96. Arnt ENSMUSG00000015522 777 0.725 - 0.725 - - - - aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]
97. Vamp4 ENSMUSG00000026696 4077 0.725 - 0.725 - - - - vesicle-associated membrane protein 4 [Source:MGI Symbol;Acc:MGI:1858730]
98. Rdx ENSMUSG00000032050 8812 0.724 - 0.724 - - - - radixin [Source:MGI Symbol;Acc:MGI:97887]
99. Kpna1 ENSMUSG00000022905 3848 0.724 - 0.724 - - - - karyopherin (importin) alpha 1 [Source:MGI Symbol;Acc:MGI:103560]
100. Trp53inp2 ENSMUSG00000038375 1466 0.724 - 0.724 - - - - transformation related protein 53 inducible nuclear protein 2 [Source:MGI Symbol;Acc:MGI:1915978]

There are 71 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA