Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Trim9

Gene Name Gene ID Reads Annotation
Trim9 ENSMUSG00000021071 870 tripartite motif-containing 9 [Source:MGI Symbol;Acc:MGI:2137354]







Genes with expression patterns similar to Trim9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trim9 ENSMUSG00000021071 870 6 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif-containing 9 [Source:MGI Symbol;Acc:MGI:2137354]
2. Rhbdl3 ENSMUSG00000017692 783 1.568 - 0.730 0.838 - - - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
3. Hoxc9 ENSMUSG00000036139 4145 1.505 - 0.720 0.785 - - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
4. Map2 ENSMUSG00000015222 2576 1.504 - - 0.767 0.737 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
5. Fgfbp3 ENSMUSG00000047632 2036 1.47 - - - 0.732 - 0.738 fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
6. Ckb ENSMUSG00000001270 8443 1.458 - 0.715 0.743 - - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
7. Spsb4 ENSMUSG00000046997 5432 1.453 0.707 - 0.746 - - - splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
8. Elavl4 ENSMUSG00000028546 6084 1.452 - - - 0.702 - 0.750 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
9. Trp53i11 ENSMUSG00000068735 15944 1.438 - 0.701 0.737 - - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
10. 3110035E14Rik 204 0.864 - - 0.864 - - - RIKEN cDNA 3110035E14 gene
11. Phactr3 ENSMUSG00000027525 233 0.855 - - 0.855 - - - phosphatase and actin regulator 3 [Source:MGI Symbol;Acc:MGI:1921439]
12. Epha5 ENSMUSG00000029245 256 0.847 - - 0.847 - - - Eph receptor A5 [Source:MGI Symbol;Acc:MGI:99654]
13. AI854517 AI854517 539 0.844 - - 0.844 - - -
14. Sox3 ENSMUSG00000045179 1137 0.831 - 0.831 - - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
15. Kbtbd11 ENSMUSG00000055675 1156 0.826 - - 0.826 - - - kelch repeat and BTB (POZ) domain containing 11 [Source:MGI Symbol;Acc:MGI:1922151]
16. Glra1 ENSMUSG00000000263 586 0.825 - - 0.825 - - - glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]
17. Stmn4 ENSMUSG00000022044 140 0.824 - - 0.824 - - - stathmin-like 4 [Source:MGI Symbol;Acc:MGI:1931224]
18. Sox2ot ENSMUSG00000105265 475 0.824 - - 0.824 - - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
19. Miat ENSMUSG00000097767 4258 0.821 - - 0.821 - - - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
20. St18 ENSMUSG00000033740 408 0.808 - - 0.808 - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
21. Celsr2 ENSMUSG00000068740 2010 0.805 - - 0.805 - - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
22. Nhlh1 ENSMUSG00000051251 2017 0.804 - - 0.804 - - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
23. Ptchd2 190 0.798 - - 0.798 - - - patched domain containing 2, transcript variant X2
24. Nes ENSMUSG00000004891 8017 0.793 - - 0.793 - - - nestin [Source:MGI Symbol;Acc:MGI:101784]
25. Ap3b2 ENSMUSG00000062444 565 0.793 - - 0.793 - - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
26. A930011O12Rik A930011O12Rik 359 0.792 - - 0.792 - - -
27. Zfp41 ENSMUSG00000047003 3975 0.788 - - 0.788 - - - zinc finger protein 41 [Source:MGI Symbol;Acc:MGI:99186]
28. Elavl3 ENSMUSG00000003410 2830 0.787 - - 0.787 - - - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
29. Tubb2b ENSMUSG00000045136 41060 0.786 - - 0.786 - - - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
30. 1700106J16Rik 1700106J16Rik 331 0.781 - - 0.781 - - -
31. Clvs1 ENSMUSG00000041216 66 0.78 - - 0.780 - - - clavesin 1 [Source:MGI Symbol;Acc:MGI:1921688]
32. Gpr98 Gpr98 1797 0.774 - - 0.774 - - -
33. Ncan ENSMUSG00000002341 521 0.771 - - 0.771 - - - neurocan [Source:MGI Symbol;Acc:MGI:104694]
34. Mapk8ip2 ENSMUSG00000022619 910 0.771 - - 0.771 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
35. Nova1 ENSMUSG00000021047 658 0.764 - - 0.764 - - - neuro-oncological ventral antigen 1 [Source:MGI Symbol;Acc:MGI:104297]
36. Trim67 ENSMUSG00000036913 70 0.763 - - 0.763 - - - tripartite motif-containing 67 [Source:MGI Symbol;Acc:MGI:3045323]
37. Srgap3 ENSMUSG00000030257 2941 0.762 - - 0.762 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
38. Cspg5 ENSMUSG00000032482 105 0.76 - - 0.760 - - - chondroitin sulfate proteoglycan 5 [Source:MGI Symbol;Acc:MGI:1352747]
39. Id4 ENSMUSG00000021379 452 0.756 - - 0.756 - - - inhibitor of DNA binding 4 [Source:MGI Symbol;Acc:MGI:99414]
40. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.755 - - 0.755 - - - dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
41. Mapk10 ENSMUSG00000046709 113 0.751 - - 0.751 - - - mitogen-activated protein kinase 10 [Source:MGI Symbol;Acc:MGI:1346863]
42. Ttyh1 ENSMUSG00000030428 279 0.75 - - - 0.750 - - tweety family member 1 [Source:MGI Symbol;Acc:MGI:1889007]
43. Fam219a ENSMUSG00000028439 1622 0.75 - - 0.750 - - - family with sequence similarity 219, member A [Source:MGI Symbol;Acc:MGI:1919151]
44. Soga3 ENSMUSG00000038916 3972 0.749 - - 0.749 - - - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
45. Scrt1 ENSMUSG00000048385 155 0.748 - - 0.748 - - - scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
46. Caskin1 ENSMUSG00000033597 104 0.747 - - 0.747 - - - CASK interacting protein 1 [Source:MGI Symbol;Acc:MGI:2442952]
47. Dll3 ENSMUSG00000003436 1086 0.747 - - 0.747 - - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
48. Cdk5r1 ENSMUSG00000048895 2376 0.747 - - 0.747 - - - cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
49. Ppp1r17 ENSMUSG00000002930 374 0.744 - - 0.744 - - - protein phosphatase 1, regulatory subunit 17 [Source:MGI Symbol;Acc:MGI:1333876]
50. Dcx ENSMUSG00000031285 1733 0.74 - 0.740 - - - - doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
51. Hes6 ENSMUSG00000067071 1692 0.74 - - 0.740 - - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
52. Lamc3 ENSMUSG00000026840 198 0.738 - 0.738 - - - - laminin gamma 3 [Source:MGI Symbol;Acc:MGI:1344394]
53. Rgma ENSMUSG00000070509 1952 0.737 - - 0.737 - - - repulsive guidance molecule family member A [Source:MGI Symbol;Acc:MGI:2679262]
54. Neurod1 ENSMUSG00000034701 1390 0.736 - 0.736 - - - - neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
55. Nrarp ENSMUSG00000078202 1708 0.735 - - 0.735 - - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
56. Btbd17 ENSMUSG00000000202 565 0.734 - - 0.734 - - - BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
57. Foxd3 ENSMUSG00000067261, ENSMUSG00000116152 168 0.734 - - 0.734 - - - forkhead box D3 [Source:MGI Symbol;Acc:MGI:1347473]
58. Grm2 ENSMUSG00000023192 147 0.733 - - 0.733 - - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
59. Insm1 ENSMUSG00000068154 480 0.731 - - 0.731 - - - insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
60. Rtn1 ENSMUSG00000021087 2547 0.73 - - - 0.730 - - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
61. Pou3f3 ENSMUSG00000045515 5137 0.729 - 0.729 - - - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
62. Fez1 ENSMUSG00000032118 2537 0.728 - 0.728 - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
63. Nell2 ENSMUSG00000022454 870 0.728 - - 0.728 - - - NEL-like 2 [Source:MGI Symbol;Acc:MGI:1858510]
64. Kif5a ENSMUSG00000074657 425 0.727 - - 0.727 - - - kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
65. Gdap1 ENSMUSG00000025777 166 0.725 - - 0.725 - - - ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
66. Nrxn2 ENSMUSG00000033768, ENSMUSG00000107104 552 0.723 - - 0.723 - - - neurexin II [Source:MGI Symbol;Acc:MGI:1096362]
67. Ttbk1 ENSMUSG00000015599 49 0.722 - - 0.722 - - - tau tubulin kinase 1 [Source:MGI Symbol;Acc:MGI:2147036]
68. Dpysl5 ENSMUSG00000029168 2096 0.721 - - 0.721 - - - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
69. Adcyap1r1 ENSMUSG00000029778 817 0.719 - - 0.719 - - - adenylate cyclase activating polypeptide 1 receptor 1 [Source:MGI Symbol;Acc:MGI:108449]
70. Pea15a ENSMUSG00000013698 6011 0.719 - - 0.719 - - - phosphoprotein enriched in astrocytes 15A [Source:MGI Symbol;Acc:MGI:104799]
71. Rfx4 ENSMUSG00000020037 455 0.718 - - 0.718 - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
72. Tagln3 ENSMUSG00000022658 6054 0.717 - - 0.717 - - - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
73. Srrm3 ENSMUSG00000039860 113 0.716 - 0.716 - - - - serine/arginine repetitive matrix 3 [Source:MGI Symbol;Acc:MGI:1920309]
74. Apba2 ENSMUSG00000030519 840 0.714 - - 0.714 - - - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
75. Acsbg1 ENSMUSG00000032281 33 0.711 - - 0.711 - - - acyl-CoA synthetase bubblegum family member 1 [Source:MGI Symbol;Acc:MGI:2385656]
76. Pou3f2 ENSMUSG00000095139 2416 0.711 - - 0.711 - - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
77. Disp2 ENSMUSG00000040035 230 0.711 - - 0.711 - - - dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
78. Phf21b ENSMUSG00000016624 849 0.71 - - 0.710 - - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
79. Fabp7 ENSMUSG00000019874 3183 0.708 - - 0.708 - - - fatty acid binding protein 7, brain [Source:MGI Symbol;Acc:MGI:101916]
80. Elmod1 ENSMUSG00000041986 75 0.707 - - 0.707 - - - ELMO/CED-12 domain containing 1 [Source:MGI Symbol;Acc:MGI:3583900]
81. 1500016L03Rik 1500016L03Rik 134 0.706 - - - 0.706 - -
82. Nmnat2 ENSMUSG00000042751 205 0.705 - - 0.705 - - - nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
83. Fam78b ENSMUSG00000060568 193 0.704 - - 0.704 - - - family with sequence similarity 78, member B [Source:MGI Symbol;Acc:MGI:2443050]
84. Kcnq2 ENSMUSG00000016346 94 0.704 - - 0.704 - - - potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
85. Neurog2 ENSMUSG00000027967 670 0.703 - 0.703 - - - - neurogenin 2 [Source:MGI Symbol;Acc:MGI:109619]
86. Sox2 ENSMUSG00000074637 8409 0.703 - - 0.703 - - - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
87. Map1b ENSMUSG00000052727 28977 0.702 - - 0.702 - - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
88. Mar-04 Mar-04 19 0.701 - - 0.701 - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA