Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Trerf1

Gene Name Gene ID Reads Annotation
Trerf1 ENSMUSG00000064043, ENSMUSG00000116235 58 transcriptional regulating factor 1 [Source:NCBI gene;Acc:224829]







Genes with expression patterns similar to Trerf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trerf1 ENSMUSG00000064043, ENSMUSG00000116235 58 6 1.000 1.000 1.000 1.000 1.000 1.000 transcriptional regulating factor 1 [Source:NCBI gene;Acc:224829]
2. Ly6g6f ENSMUSG00000034923 14 0.935 - 0.935 - - - - lymphocyte antigen 6 complex, locus G6F [Source:MGI Symbol;Acc:MGI:3616082]
3. Rnf180 ENSMUSG00000021720 6 0.931 - 0.931 - - - - ring finger protein 180 [Source:MGI Symbol;Acc:MGI:1919066]
4. Hbq1b ENSMUSG00000073063 63 0.916 - 0.916 - - - - hemoglobin, theta 1B [Source:MGI Symbol;Acc:MGI:3613460]
5. Lipf ENSMUSG00000024768 8 0.913 - 0.913 - - - - lipase, gastric [Source:MGI Symbol;Acc:MGI:1914967]
6. Olfr1281 ENSMUSG00000095156 4 0.913 - 0.913 - - - - olfactory receptor 1281 [Source:MGI Symbol;Acc:MGI:3031115]
7. Rpl23a ENSMUSG00000058546 15 0.913 - 0.913 - - - - ribosomal protein L23A [Source:MGI Symbol;Acc:MGI:3040672]
8. 1700112D23Rik ENSMUSG00000091329 6 0.913 - 0.913 - - - - RIKEN cDNA 1700112D23 gene [Source:MGI Symbol;Acc:MGI:1920861]
9. Irf5 ENSMUSG00000029771 74 0.902 - 0.902 - - - - interferon regulatory factor 5 [Source:MGI Symbol;Acc:MGI:1350924]
10. Phf1 ENSMUSG00000024193 65 0.9 - 0.900 - - - - PHD finger protein 1 [Source:MGI Symbol;Acc:MGI:98647]
11. Dock8 ENSMUSG00000052085 64 0.893 - 0.893 - - - - dedicator of cytokinesis 8 [Source:MGI Symbol;Acc:MGI:1921396]
12. Ifi47 ENSMUSG00000078920, ENSMUSG00000116330, ENSMUSG00000116420 45 0.882 - 0.882 - - - - interferon gamma inducible protein 47 [Source:NCBI gene;Acc:15953]
13. Mpl ENSMUSG00000006389 46 0.877 - 0.877 - - - - myeloproliferative leukemia virus oncogene [Source:MGI Symbol;Acc:MGI:97076]
14. Mapk15 ENSMUSG00000063704 89 0.873 - 0.873 - - - - mitogen-activated protein kinase 15 [Source:MGI Symbol;Acc:MGI:2652894]
15. Sspo ENSMUSG00000029797 15 0.872 - 0.872 - - - - SCO-spondin [Source:MGI Symbol;Acc:MGI:2674311]
16. Rpl17-ps5 ENSMUSG00000081855 19 0.871 - 0.871 - - - - ribosomal protein L17, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3704246]
17. Mctp2 ENSMUSG00000032776 37 0.868 - 0.868 - - - - multiple C2 domains, transmembrane 2 [Source:MGI Symbol;Acc:MGI:2685335]
18. Kcna5 ENSMUSG00000045534 91 0.865 - 0.865 - - - - potassium voltage-gated channel, shaker-related subfamily, member 5 [Source:MGI Symbol;Acc:MGI:96662]
19. Ptchd1 ENSMUSG00000041552 91 0.862 - 0.862 - - - - patched domain containing 1 [Source:MGI Symbol;Acc:MGI:2685233]
20. Gm12696 ENSMUSG00000084159 37 0.858 - 0.858 - - - - predicted gene 12696 [Source:MGI Symbol;Acc:MGI:3649288]
21. Gm17249 ENSMUSG00000097309 22 0.856 - 0.856 - - - - predicted gene, 17249 [Source:MGI Symbol;Acc:MGI:4936883]
22. Erf ENSMUSG00000040857 286 0.856 - 0.856 - - - - Ets2 repressor factor [Source:MGI Symbol;Acc:MGI:109637]
23. Cers3 ENSMUSG00000030510 20 0.851 0.851 - - - - - ceramide synthase 3 [Source:MGI Symbol;Acc:MGI:2681008]
24. Trpm5 ENSMUSG00000009246 15 0.845 - 0.845 - - - - transient receptor potential cation channel, subfamily M, member 5 [Source:MGI Symbol;Acc:MGI:1861718]
25. Gm15614 ENSMUSG00000085234 36 0.845 - 0.845 - - - - predicted gene 15614 [Source:MGI Symbol;Acc:MGI:3783059]
26. Gm17235 ENSMUSG00000080180 22 0.844 - 0.844 - - - - predicted gene 17235 [Source:MGI Symbol;Acc:MGI:4938062]
27. Cd180 ENSMUSG00000021624 43 0.844 - 0.844 - - - - CD180 antigen [Source:MGI Symbol;Acc:MGI:1194924]
28. 4933430I17Rik ENSMUSG00000058046 29 0.838 - 0.838 - - - - RIKEN cDNA 4933430I17 gene [Source:MGI Symbol;Acc:MGI:3045314]
29. Gm19357 Gm19357 51 0.837 0.837 - - - - -
30. Gm2788 ENSMUSG00000085995 51 0.833 - 0.833 - - - - predicted gene 2788 [Source:MGI Symbol;Acc:MGI:3780956]
31. Hist1h2ai ENSMUSG00000071516 101 0.83 - 0.830 - - - - histone cluster 1, H2ai [Source:MGI Symbol;Acc:MGI:2448457]
32. Gm4978 ENSMUSG00000062874 17 0.827 - 0.827 - - - - predicted gene 4978 [Source:MGI Symbol;Acc:MGI:3645765]
33. Olfr613 ENSMUSG00000078624 56 0.827 - 0.827 - - - - olfactory receptor 613 [Source:MGI Symbol;Acc:MGI:3030447]
34. 5033428I22Rik ENSMUSG00000097910 203 0.825 - 0.825 - - - - RIKEN cDNA 5033428I22 gene [Source:MGI Symbol;Acc:MGI:1923246]
35. Pla2g16 ENSMUSG00000060675 237 0.824 - 0.824 - - - - phospholipase A2, group XVI [Source:MGI Symbol;Acc:MGI:2179715]
36. Iqca ENSMUSG00000026301 12 0.824 - - 0.824 - - - IQ motif containing with AAA domain [Source:MGI Symbol;Acc:MGI:1922168]
37. Rxfp2 ENSMUSG00000053368 56 0.823 - 0.823 - - - - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
38. Wdr20a Wdr20a 274 0.817 - 0.817 - - - -
39. Gm23251 ENSMUSG00000076961 187 0.816 - 0.816 - - - - predicted gene, 23251 [Source:MGI Symbol;Acc:MGI:5453028]
40. Gm14049 ENSMUSG00000083953 21 0.815 - 0.815 - - - - predicted gene 14049 [Source:MGI Symbol;Acc:MGI:3650777]
41. Hist1h1a ENSMUSG00000049539 193 0.814 - 0.814 - - - - histone cluster 1, H1a [Source:MGI Symbol;Acc:MGI:1931523]
42. Gm15566 ENSMUSG00000083772 81 0.81 - 0.810 - - - - predicted gene 15566 [Source:MGI Symbol;Acc:MGI:3783015]
43. Eaf2 ENSMUSG00000022838 36 0.803 - 0.803 - - - - ELL associated factor 2 [Source:MGI Symbol;Acc:MGI:2146616]
44. Gm12070 ENSMUSG00000069939 315 0.8 - 0.800 - - - - predicted gene 12070 [Source:MGI Symbol;Acc:MGI:3650751]
45. Fam83a ENSMUSG00000051225, ENSMUSG00000116387 119 0.798 - 0.798 - - - - family with sequence similarity 83, member A [Source:MGI Symbol;Acc:MGI:2447773]
46. Gm8281 ENSMUSG00000095681 27 0.797 - 0.797 - - - - predicted gene, 8281 [Source:MGI Symbol;Acc:MGI:3647811]
47. Gca ENSMUSG00000026893 66 0.795 - 0.795 - - - - grancalcin [Source:MGI Symbol;Acc:MGI:1918521]
48. Gm16266 Gm16266 27 0.794 - 0.794 - - - -
49. Gm14565 ENSMUSG00000085635 59 0.793 - 0.793 - - - - predicted gene 14565 [Source:MGI Symbol;Acc:MGI:3705304]
50. Gpr137c ENSMUSG00000049092 15 0.792 0.792 - - - - - G protein-coupled receptor 137C [Source:MGI Symbol;Acc:MGI:1917963]
51. Zim1 ENSMUSG00000002266 352 0.788 - 0.788 - - - - zinc finger, imprinted 1 [Source:MGI Symbol;Acc:MGI:1341879]
52. 1110019D14Rik ENSMUSG00000097616 75 0.786 - 0.786 - - - - RIKEN cDNA 1110019D14 gene [Source:MGI Symbol;Acc:MGI:1923561]
53. Rps25-ps1 ENSMUSG00000067344 44 0.783 - 0.783 - - - - ribosomal protein S25, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642902]
54. Gm7816 ENSMUSG00000083261 20 0.78 - 0.780 - - - - predicted pseudogene 7816 [Source:MGI Symbol;Acc:MGI:3646286]
55. Iqcd ENSMUSG00000029601 20 0.778 0.778 - - - - - IQ motif containing D [Source:MGI Symbol;Acc:MGI:1922982]
56. Chrm4 ENSMUSG00000040495 18 0.778 0.778 - - - - - cholinergic receptor, muscarinic 4 [Source:MGI Symbol;Acc:MGI:88399]
57. Nrn1l ENSMUSG00000044287 8 0.776 0.776 - - - - - neuritin 1-like [Source:MGI Symbol;Acc:MGI:2443642]
58. Gm6211 ENSMUSG00000091577 43 0.776 0.776 - - - - - predicted gene 6211 [Source:MGI Symbol;Acc:MGI:3646534]
59. Gal3st2 ENSMUSG00000094651 4 0.776 0.776 - - - - - galactose-3-O-sulfotransferase 2 [Source:MGI Symbol;Acc:MGI:2685834]
60. 1700055D18Rik ENSMUSG00000070997 26 0.776 0.776 - - - - - RIKEN cDNA 1700055D18 gene [Source:MGI Symbol;Acc:MGI:1920655]
61. Gm14200 ENSMUSG00000081800 3 0.776 0.776 - - - - - predicted gene 14200 [Source:MGI Symbol;Acc:MGI:3651374]
62. Gm14682 ENSMUSG00000081442 4 0.776 0.776 - - - - - predicted gene 14682 [Source:MGI Symbol;Acc:MGI:3705428]
63. Rufy4 ENSMUSG00000061815 17 0.776 0.776 - - - - - RUN and FYVE domain containing 4 [Source:MGI Symbol;Acc:MGI:3588214]
64. Nalcn ENSMUSG00000000197 11 0.776 0.776 - - - - - sodium leak channel, non-selective [Source:MGI Symbol;Acc:MGI:2444306]
65. Gm16463 ENSMUSG00000082139 3 0.776 0.776 - - - - - predicted gene 16463 [Source:MGI Symbol;Acc:MGI:3643937]
66. 6720483E21Rik ENSMUSG00000097934 16 0.776 0.776 - - - - - RIKEN cDNA 6720483E21 gene [Source:MGI Symbol;Acc:MGI:1924991]
67. Ism2 ENSMUSG00000050671 4 0.776 0.776 - - - - - isthmin 2 [Source:MGI Symbol;Acc:MGI:2685110]
68. Cysltr1 ENSMUSG00000052821 121 0.772 - 0.772 - - - - cysteinyl leukotriene receptor 1 [Source:MGI Symbol;Acc:MGI:1926218]
69. Vps25 ENSMUSG00000078656 14 0.771 0.771 - - - - - vacuolar protein sorting 25 [Source:MGI Symbol;Acc:MGI:106354]
70. Gm15222 ENSMUSG00000086746 69 0.771 - 0.771 - - - - predicted gene 15222 [Source:MGI Symbol;Acc:MGI:3705297]
71. Gm25395 ENSMUSG00000087968 43 0.77 0.770 - - - - - predicted gene, 25395 [Source:MGI Symbol;Acc:MGI:5455172]
72. Slc13a1 ENSMUSG00000029700 7 0.767 0.767 - - - - - solute carrier family 13 (sodium/sulfate symporters), member 1 [Source:MGI Symbol;Acc:MGI:1859937]
73. Fam120c ENSMUSG00000025262 10 0.767 0.767 - - - - - family with sequence similarity 120, member C [Source:MGI Symbol;Acc:MGI:2387687]
74. Lrrc2 ENSMUSG00000032495 179 0.764 - - 0.764 - - - leucine rich repeat containing 2 [Source:MGI Symbol;Acc:MGI:1921499]
75. Gpr176 ENSMUSG00000040133 6 0.762 0.762 - - - - - G protein-coupled receptor 176 [Source:MGI Symbol;Acc:MGI:2685858]
76. Gpx5 ENSMUSG00000004344 16 0.762 0.762 - - - - - glutathione peroxidase 5 [Source:MGI Symbol;Acc:MGI:104886]
77. Gm11953 ENSMUSG00000082816 13 0.762 0.762 - - - - - predicted gene 11953 [Source:MGI Symbol;Acc:MGI:3649564]
78. Grin1 ENSMUSG00000026959 19 0.762 0.762 - - - - - glutamate receptor, ionotropic, NMDA1 (zeta 1) [Source:MGI Symbol;Acc:MGI:95819]
79. Bckdha ENSMUSG00000060376 653 0.761 - - 0.761 - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
80. Gm13986 ENSMUSG00000087203 13 0.761 0.761 - - - - - predicted gene 13986 [Source:MGI Symbol;Acc:MGI:3651937]
81. Hist1h4c ENSMUSG00000060678 136 0.76 0.760 - - - - - histone cluster 1, H4c [Source:MGI Symbol;Acc:MGI:2448421]
82. Gm7102 ENSMUSG00000094649 73 0.757 - 0.757 - - - - predicted gene 7102 [Source:MGI Symbol;Acc:MGI:3648735]
83. Casc1 ENSMUSG00000043541 30 0.755 0.755 - - - - - cancer susceptibility candidate 1 [Source:MGI Symbol;Acc:MGI:2444480]
84. Bbs12 ENSMUSG00000051444 295 0.755 - - 0.755 - - - Bardet-Biedl syndrome 12 (human) [Source:MGI Symbol;Acc:MGI:2686651]
85. Tgfbr2 ENSMUSG00000032440 636 0.755 - 0.755 - - - - transforming growth factor, beta receptor II [Source:MGI Symbol;Acc:MGI:98729]
86. Hmx2 ENSMUSG00000050100 31 0.751 - - 0.751 - - - H6 homeobox 2 [Source:MGI Symbol;Acc:MGI:107159]
87. Gnat2 ENSMUSG00000009108 42 0.75 - - 0.750 - - - guanine nucleotide binding protein, alpha transducing 2 [Source:MGI Symbol;Acc:MGI:95779]
88. Tmem229b ENSMUSG00000046157 154 0.748 - - 0.748 - - - transmembrane protein 229B [Source:MGI Symbol;Acc:MGI:2444389]
89. Atg16l2 ENSMUSG00000047767 68 0.747 0.747 - - - - - autophagy related 16-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1920933]
90. Brinp1 ENSMUSG00000028351 76 0.746 0.746 - - - - - bone morphogenic protein/retinoic acid inducible neural specific 1 [Source:MGI Symbol;Acc:MGI:1928478]
91. Zfand2a ENSMUSG00000053581 353 0.746 - - 0.746 - - - zinc finger, AN1-type domain 2A [Source:MGI Symbol;Acc:MGI:2140729]
92. Tmem150a ENSMUSG00000055912, ENSMUSG00000102455 471 0.746 - - 0.746 - - - transmembrane protein 150A [Source:MGI Symbol;Acc:MGI:2385244]
93. 6720427I07Rik ENSMUSG00000097375 220 0.745 - 0.745 - - - - RIKEN cDNA 6720427I07 gene [Source:MGI Symbol;Acc:MGI:1924398]
94. Gm3200 ENSMUSG00000097388 8 0.745 0.745 - - - - - predicted pseudogene 3200 [Source:MGI Symbol;Acc:MGI:3781379]
95. Slc22a3 ENSMUSG00000023828 78 0.744 0.744 - - - - - solute carrier family 22 (organic cation transporter), member 3 [Source:MGI Symbol;Acc:MGI:1333817]
96. Yars ENSMUSG00000028811 1182 0.742 - 0.742 - - - - tyrosyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:2147627]
97. Serpinb9 ENSMUSG00000045827 184 0.742 - 0.742 - - - - serine (or cysteine) peptidase inhibitor, clade B, member 9 [Source:MGI Symbol;Acc:MGI:106603]
98. Gpt ENSMUSG00000022546 145 0.74 - 0.740 - - - - glutamic pyruvic transaminase, soluble [Source:MGI Symbol;Acc:MGI:95802]
99. Mars2 ENSMUSG00000046994 188 0.74 - 0.740 - - - - methionine-tRNA synthetase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:2444136]
100. Pde4c ENSMUSG00000031842, ENSMUSG00000111773 8 0.739 0.739 - - - - - phosphodiesterase 4C, cAMP specific [Source:MGI Symbol;Acc:MGI:99556]

There are 68 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA