Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Topbp1

Gene Name Gene ID Reads Annotation
Topbp1 ENSMUSG00000032555 3260 topoisomerase (DNA) II binding protein 1 [Source:MGI Symbol;Acc:MGI:1920018]







Genes with expression patterns similar to Topbp1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Topbp1 ENSMUSG00000032555 3260 6 1.000 1.000 1.000 1.000 1.000 1.000 topoisomerase (DNA) II binding protein 1 [Source:MGI Symbol;Acc:MGI:1920018]
2. Swt1 ENSMUSG00000052748 2836 0.835 - 0.835 - - - - SWT1 RNA endoribonuclease homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914125]
3. Herc1 ENSMUSG00000038664 1693 0.833 - 0.833 - - - - HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 [Source:MGI Symbol;Acc:MGI:2384589]
4. Dtnb ENSMUSG00000071454 946 0.827 - 0.827 - - - - dystrobrevin, beta [Source:MGI Symbol;Acc:MGI:1203728]
5. Tut1 ENSMUSG00000071645 656 0.824 - 0.824 - - - - terminal uridylyl transferase 1, U6 snRNA-specific [Source:MGI Symbol;Acc:MGI:1917294]
6. BC016423 BC016423 753 0.819 - 0.819 - - - -
7. Epb4.1l2 Epb4.1l2 1613 0.813 - 0.813 - - - -
8. Rnf14 ENSMUSG00000060450 3110 0.811 - 0.811 - - - - ring finger protein 14 [Source:MGI Symbol;Acc:MGI:1929668]
9. Runx2 ENSMUSG00000039153 319 0.81 - 0.810 - - - - runt related transcription factor 2 [Source:MGI Symbol;Acc:MGI:99829]
10. Mrps24 ENSMUSG00000020477 1459 0.801 - 0.801 - - - - mitochondrial ribosomal protein S24 [Source:MGI Symbol;Acc:MGI:1928142]
11. Ubtf ENSMUSG00000020923 3746 0.8 0.800 - - - - - upstream binding transcription factor, RNA polymerase I [Source:MGI Symbol;Acc:MGI:98512]
12. Pcyox1l ENSMUSG00000024579 517 0.798 - - - 0.798 - - prenylcysteine oxidase 1 like [Source:MGI Symbol;Acc:MGI:3606062]
13. Slc15a4 ENSMUSG00000029416 453 0.794 - 0.794 - - - - solute carrier family 15, member 4 [Source:MGI Symbol;Acc:MGI:2140796]
14. Eps15l1 ENSMUSG00000006276 1571 0.788 - 0.788 - - - - epidermal growth factor receptor pathway substrate 15-like 1 [Source:MGI Symbol;Acc:MGI:104582]
15. Chaf1b ENSMUSG00000022945 1771 0.786 0.786 - - - - - chromatin assembly factor 1, subunit B (p60) [Source:MGI Symbol;Acc:MGI:1314881]
16. Tmem170 ENSMUSG00000031953 67 0.785 - - 0.785 - - - transmembrane protein 170 [Source:MGI Symbol;Acc:MGI:106426]
17. Ap5m1 ENSMUSG00000036291 380 0.784 - - 0.784 - - - adaptor-related protein complex 5, mu 1 subunit [Source:MGI Symbol;Acc:MGI:1921635]
18. 9230110C19Rik 238 0.777 - - 0.777 - - - RIKEN cDNA 9230110C19 gene, transcript variant X2
19. Gm12668 ENSMUSG00000085817 60 0.772 - - 0.772 - - - predicted gene 12668 [Source:MGI Symbol;Acc:MGI:3651936]
20. Hells ENSMUSG00000025001 3346 0.772 - 0.772 - - - - helicase, lymphoid specific [Source:MGI Symbol;Acc:MGI:106209]
21. Gm13302 ENSMUSG00000084010 20 0.767 - - 0.767 - - - predicted gene 13302 [Source:MGI Symbol;Acc:MGI:3705777]
22. Pard6g ENSMUSG00000056214 2715 0.767 - 0.767 - - - - par-6 family cell polarity regulator gamma [Source:MGI Symbol;Acc:MGI:2135606]
23. Rsf1 ENSMUSG00000035623 2499 0.767 - 0.767 - - - - remodeling and spacing factor 1 [Source:MGI Symbol;Acc:MGI:2682305]
24. Creb3l3 ENSMUSG00000035041 46 0.766 - - 0.766 - - - cAMP responsive element binding protein 3-like 3 [Source:MGI Symbol;Acc:MGI:2384786]
25. Gm10604 ENSMUSG00000073995 10 0.766 - - 0.766 - - - predicted gene 10604 [Source:MGI Symbol;Acc:MGI:3642593]
26. 2510046G10Rik ENSMUSG00000066175 41 0.766 - - 0.766 - - - RIKEN cDNA 2510046G10 gene [Source:MGI Symbol;Acc:MGI:3698051]
27. Gm26600 ENSMUSG00000097226 9 0.766 - - 0.766 - - - predicted gene, 26600 [Source:MGI Symbol;Acc:MGI:5477094]
28. Atp6ap1l ENSMUSG00000078958 12 0.766 - - 0.766 - - - ATPase, H+ transporting, lysosomal accessory protein 1-like [Source:MGI Symbol;Acc:MGI:3648665]
29. Gm7008 ENSMUSG00000035983 55 0.765 - - 0.765 - - - predicted gene 7008 [Source:MGI Symbol;Acc:MGI:3647211]
30. 5830418K08Rik 5830418K08Rik 1814 0.764 - 0.764 - - - -
31. Snx25 ENSMUSG00000038291 212 0.764 - - 0.764 - - - sorting nexin 25 [Source:MGI Symbol;Acc:MGI:2142610]
32. Gm10719 ENSMUSG00000095547 349 0.763 - - 0.763 - - - predicted gene 10719 [Source:MGI Symbol;Acc:MGI:3641690]
33. Bmf ENSMUSG00000040093 553 0.763 - - - 0.763 - - BCL2 modifying factor [Source:MGI Symbol;Acc:MGI:2176433]
34. Fam189a2 ENSMUSG00000071604 71 0.763 - - 0.763 - - - family with sequence similarity 189, member A2 [Source:MGI Symbol;Acc:MGI:2685813]
35. Comtd1 ENSMUSG00000021773 175 0.762 - - 0.762 - - - catechol-O-methyltransferase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916406]
36. Gon4l ENSMUSG00000054199 31 0.762 - - 0.762 - - - gon-4-like (C.elegans) [Source:MGI Symbol;Acc:MGI:1917579]
37. Mybl1 ENSMUSG00000025912 178 0.762 - - - 0.762 - - myeloblastosis oncogene-like 1 [Source:MGI Symbol;Acc:MGI:99925]
38. Gk5 ENSMUSG00000041440 261 0.762 - - 0.762 - - - glycerol kinase 5 (putative) [Source:MGI Symbol;Acc:MGI:2443336]
39. Kcnj15 ENSMUSG00000062609 31 0.762 - - 0.762 - - - potassium inwardly-rectifying channel, subfamily J, member 15 [Source:MGI Symbol;Acc:MGI:1310000]
40. Tead4 ENSMUSG00000030353 186 0.761 - - 0.761 - - - TEA domain family member 4 [Source:MGI Symbol;Acc:MGI:106907]
41. Tmem41a ENSMUSG00000022856 1157 0.76 - 0.760 - - - - transmembrane protein 41a [Source:MGI Symbol;Acc:MGI:1913914]
42. Pam16 ENSMUSG00000014301 14 0.759 - - 0.759 - - - presequence translocase-asssociated motor 16 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913699]
43. Cnot2 ENSMUSG00000020166 5331 0.755 - 0.755 - - - - CCR4-NOT transcription complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1919318]
44. Tcaim ENSMUSG00000046603 178 0.754 - - 0.754 - - - T cell activation inhibitor, mitochondrial [Source:MGI Symbol;Acc:MGI:1196217]
45. Gm13473 ENSMUSG00000083776 114 0.753 - - 0.753 - - - predicted gene 13473 [Source:MGI Symbol;Acc:MGI:3652338]
46. Ankrd29 ENSMUSG00000057766 352 0.753 - - 0.753 - - - ankyrin repeat domain 29 [Source:MGI Symbol;Acc:MGI:2687055]
47. Thbs2 ENSMUSG00000023885 150 0.752 - - 0.752 - - - thrombospondin 2 [Source:MGI Symbol;Acc:MGI:98738]
48. Asb9 ENSMUSG00000031384 22 0.751 - - 0.751 - - - ankyrin repeat and SOCS box-containing 9 [Source:MGI Symbol;Acc:MGI:1916549]
49. Rpl30-ps3 ENSMUSG00000080873 111 0.746 - - 0.746 - - - ribosomal protein L30, pseudogene 3 [Source:MGI Symbol;Acc:MGI:1321401]
50. Gm13680 ENSMUSG00000081400 447 0.745 - - 0.745 - - - predicted gene 13680 [Source:MGI Symbol;Acc:MGI:3652285]
51. Tfpi ENSMUSG00000027082 1717 0.745 - 0.745 - - - - tissue factor pathway inhibitor [Source:MGI Symbol;Acc:MGI:1095418]
52. Taf4a Taf4a 2077 0.745 - 0.745 - - - -
53. Itsn1 ENSMUSG00000022957 3681 0.743 0.743 - - - - - intersectin 1 (SH3 domain protein 1A) [Source:MGI Symbol;Acc:MGI:1338069]
54. Abcc9 ENSMUSG00000030249 487 0.742 - - 0.742 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:MGI Symbol;Acc:MGI:1352630]
55. Sh3tc2 ENSMUSG00000045629 69 0.741 - - 0.741 - - - SH3 domain and tetratricopeptide repeats 2 [Source:MGI Symbol;Acc:MGI:2444417]
56. Rac1 ENSMUSG00000001847 10535 0.741 - 0.741 - - - - Rac family small GTPase 1 [Source:MGI Symbol;Acc:MGI:97845]
57. Optn ENSMUSG00000026672 36 0.74 - - 0.740 - - - optineurin [Source:MGI Symbol;Acc:MGI:1918898]
58. Pycard ENSMUSG00000030793 106 0.74 - - - 0.740 - - PYD and CARD domain containing [Source:MGI Symbol;Acc:MGI:1931465]
59. Arpc5 ENSMUSG00000008475 8530 0.74 0.740 - - - - - actin related protein 2/3 complex, subunit 5 [Source:MGI Symbol;Acc:MGI:1915021]
60. Slc39a14 ENSMUSG00000022094 499 0.739 - - 0.739 - - - solute carrier family 39 (zinc transporter), member 14 [Source:MGI Symbol;Acc:MGI:2384851]
61. Setd1a ENSMUSG00000042308 2472 0.738 - 0.738 - - - - SET domain containing 1A [Source:MGI Symbol;Acc:MGI:2446244]
62. Adck4 293 0.738 - - - 0.738 - - aarF domain containing kinase 4, transcript variant X7
63. Rgcc ENSMUSG00000022018 307 0.737 - - 0.737 - - - regulator of cell cycle [Source:MGI Symbol;Acc:MGI:1913464]
64. Plscr1 ENSMUSG00000032369 359 0.734 - - 0.734 - - - phospholipid scramblase 1 [Source:MGI Symbol;Acc:MGI:893575]
65. 1300002E11Rik ENSMUSG00000097290 149 0.734 - - 0.734 - - - RIKEN cDNA 1300002E11 gene [Source:MGI Symbol;Acc:MGI:1919001]
66. Glud1 ENSMUSG00000021794 6385 0.734 - 0.734 - - - - glutamate dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:95753]
67. Lrig3 ENSMUSG00000020105 2166 0.733 - 0.733 - - - - leucine-rich repeats and immunoglobulin-like domains 3 [Source:MGI Symbol;Acc:MGI:2443955]
68. Ccl27a ENSMUSG00000073888, ENSMUSG00000093828, ENSMUSG00000095247 262 0.733 - - 0.733 - - - chemokine (C-C motif) ligand 27A [Source:MGI Symbol;Acc:MGI:1343459]
69. Lama5 ENSMUSG00000015647 351 0.732 - - - 0.732 - - laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
70. Retsat ENSMUSG00000056666 118 0.729 - - 0.729 - - - retinol saturase (all trans retinol 13,14 reductase) [Source:MGI Symbol;Acc:MGI:1914692]
71. Cpt1a ENSMUSG00000024900 332 0.729 - - 0.729 - - - carnitine palmitoyltransferase 1a, liver [Source:MGI Symbol;Acc:MGI:1098296]
72. Zmym6 ENSMUSG00000042408 218 0.728 - - 0.728 - - - zinc finger, MYM-type 6 [Source:MGI Symbol;Acc:MGI:106505]
73. Pigyl ENSMUSG00000010607 1418 0.728 - - - 0.728 - - phosphatidylinositol glycan anchor biosynthesis, class Y-like [Source:MGI Symbol;Acc:MGI:1913518]
74. Acin1 ENSMUSG00000022185 9693 0.728 - 0.728 - - - - apoptotic chromatin condensation inducer 1 [Source:MGI Symbol;Acc:MGI:1891824]
75. Rbm46 ENSMUSG00000033882 99 0.727 - - 0.727 - - - RNA binding motif protein 46 [Source:MGI Symbol;Acc:MGI:3645057]
76. Cacng2 ENSMUSG00000019146 84 0.727 - - 0.727 - - - calcium channel, voltage-dependent, gamma subunit 2 [Source:MGI Symbol;Acc:MGI:1316660]
77. Gm9990 Gm9990 256 0.726 - - 0.726 - - -
78. Pcmt1 ENSMUSG00000019795, ENSMUSG00000116405 2517 0.726 - 0.726 - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:97502]
79. Aida ENSMUSG00000042901 4507 0.726 - 0.726 - - - - axin interactor, dorsalization associated [Source:MGI Symbol;Acc:MGI:1919737]
80. Psmd1 ENSMUSG00000026229 7421 0.725 0.725 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:MGI Symbol;Acc:MGI:1917497]
81. Gm13423 ENSMUSG00000081648 80 0.725 - - 0.725 - - - predicted gene 13423 [Source:MGI Symbol;Acc:MGI:3650165]
82. Trnau1ap ENSMUSG00000028898 1182 0.725 - - 0.725 - - - tRNA selenocysteine 1 associated protein 1 [Source:MGI Symbol;Acc:MGI:1919037]
83. Gm10248 ENSMUSG00000068680 65 0.724 - - - 0.724 - - predicted gene 10248 [Source:MGI Symbol;Acc:MGI:3641931]
84. Park7 ENSMUSG00000028964 3520 0.724 0.724 - - - - - Parkinson disease (autosomal recessive, early onset) 7 [Source:MGI Symbol;Acc:MGI:2135637]
85. Trip11 ENSMUSG00000021188 2368 0.723 - - 0.723 - - - thyroid hormone receptor interactor 11 [Source:MGI Symbol;Acc:MGI:1924393]
86. Usp8 ENSMUSG00000027363 1964 0.723 0.723 - - - - - ubiquitin specific peptidase 8 [Source:MGI Symbol;Acc:MGI:1934029]
87. Mrpl19 ENSMUSG00000030045 3173 0.722 - 0.722 - - - - mitochondrial ribosomal protein L19 [Source:MGI Symbol;Acc:MGI:1926274]
88. Gm10116 Gm10116 4536 0.722 - 0.722 - - - -
89. Prkd1 ENSMUSG00000002688 463 0.721 - - - 0.721 - - protein kinase D1 [Source:MGI Symbol;Acc:MGI:99879]
90. AI597468 AI597468 3278 0.721 - 0.721 - - - -
91. D19Bwg1357e D19Bwg1357e 2534 0.719 - 0.719 - - - -
92. Cln6 ENSMUSG00000032245 362 0.718 - - 0.718 - - - ceroid-lipofuscinosis, neuronal 6 [Source:MGI Symbol;Acc:MGI:2159324]
93. Cstf1 ENSMUSG00000027498 3886 0.717 - 0.717 - - - - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:MGI Symbol;Acc:MGI:1914587]
94. Pus7 ENSMUSG00000057541 1052 0.717 - - 0.717 - - - pseudouridylate synthase 7 [Source:MGI Symbol;Acc:MGI:1925947]
95. Plcg1 ENSMUSG00000016933 2046 0.716 - 0.716 - - - - phospholipase C, gamma 1 [Source:MGI Symbol;Acc:MGI:97615]
96. Setd5 ENSMUSG00000034269 3438 0.716 - 0.716 - - - - SET domain containing 5 [Source:MGI Symbol;Acc:MGI:1920145]
97. Gm14217 Gm14217 2344 0.715 0.715 - - - - -
98. Abcg4 ENSMUSG00000032131 186 0.714 - - 0.714 - - - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
99. Zbtb41 ENSMUSG00000033964 787 0.714 - - 0.714 - - - zinc finger and BTB domain containing 41 [Source:MGI Symbol;Acc:MGI:2444487]
100. Fam195b 1420 0.713 - - 0.713 - - - family with sequence similarity 195, member B, transcript variant X1

There are 25 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA