Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Top1mt

Gene Name Gene ID Reads Annotation
Top1mt ENSMUSG00000000934 72 DNA topoisomerase 1, mitochondrial [Source:MGI Symbol;Acc:MGI:1920210]







Genes with expression patterns similar to Top1mt

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Top1mt ENSMUSG00000000934 72 6 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase 1, mitochondrial [Source:MGI Symbol;Acc:MGI:1920210]
2. Angptl3 ENSMUSG00000028553 11 0.937 - - - 0.937 - - angiopoietin-like 3 [Source:MGI Symbol;Acc:MGI:1353627]
3. Abcb4 ENSMUSG00000042476 26 0.937 - - - 0.937 - - ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:MGI Symbol;Acc:MGI:97569]
4. Gdf15 ENSMUSG00000038508 10 0.932 - - - 0.932 - - growth differentiation factor 15 [Source:MGI Symbol;Acc:MGI:1346047]
5. Vmn1r-ps68 ENSMUSG00000092359 27 0.932 - - - 0.932 - - vomeronasal 1 receptor, pseudogene 68 [Source:MGI Symbol;Acc:MGI:3852413]
6. Otoa ENSMUSG00000034990 11 0.932 - - - 0.932 - - otoancorin [Source:MGI Symbol;Acc:MGI:2149209]
7. A130051J06Rik ENSMUSG00000097643 24 0.932 - - - 0.932 - - RIKEN cDNA A130051J0 gene [Source:MGI Symbol;Acc:MGI:3642574]
8. Glipr1 ENSMUSG00000056888 12 0.932 - - - 0.932 - - GLI pathogenesis-related 1 (glioma) [Source:MGI Symbol;Acc:MGI:1920940]
9. Il1r2 ENSMUSG00000026073 26 0.927 - - - 0.927 - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
10. Mar-01 Mar-01 28 0.92 - - - 0.920 - -
11. Kirrel3 ENSMUSG00000032036 42 0.918 - - - 0.918 - - kirre like nephrin family adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1914953]
12. Ptx4 ENSMUSG00000044172 13 0.916 - - - 0.916 - - pentraxin 4 [Source:MGI Symbol;Acc:MGI:1915759]
13. Gm11868 ENSMUSG00000050550 36 0.914 - - - 0.914 - - predicted gene 11868 [Source:MGI Symbol;Acc:MGI:3650507]
14. Creb3l3 ENSMUSG00000035041 46 0.913 - - - 0.913 - - cAMP responsive element binding protein 3-like 3 [Source:MGI Symbol;Acc:MGI:2384786]
15. C8b ENSMUSG00000029656 12 0.912 - - - 0.912 - - complement component 8, beta polypeptide [Source:MGI Symbol;Acc:MGI:88236]
16. Sh2d4a ENSMUSG00000053886 52 0.912 - - - 0.912 - - SH2 domain containing 4A [Source:MGI Symbol;Acc:MGI:1919531]
17. Gm826 ENSMUSG00000074623 27 0.912 - - - 0.912 - - predicted gene 826 [Source:MGI Symbol;Acc:MGI:2685672]
18. Hc ENSMUSG00000026874 12 0.91 - - - 0.910 - - hemolytic complement [Source:MGI Symbol;Acc:MGI:96031]
19. Siglec5 Siglec5 18 0.906 - - - 0.906 - -
20. Gm1141 ENSMUSG00000073130 43 0.904 - - - 0.904 - - predicted gene 1141 [Source:MGI Symbol;Acc:MGI:2685987]
21. Ccrl2 ENSMUSG00000043953 22 0.903 - - - 0.903 - - chemokine (C-C motif) receptor-like 2 [Source:MGI Symbol;Acc:MGI:1920904]
22. Abca8b ENSMUSG00000020620 54 0.902 - - - 0.902 - - ATP-binding cassette, sub-family A (ABC1), member 8b [Source:MGI Symbol;Acc:MGI:1351668]
23. Gm10010 ENSMUSG00000056771 37 0.9 - - - 0.900 - - predicted gene 10010 [Source:MGI Symbol;Acc:MGI:3641978]
24. Gm4879 ENSMUSG00000048261 46 0.9 - - - 0.900 - - predicted pseudogene 4879 [Source:MGI Symbol;Acc:MGI:3648111]
25. Bphl ENSMUSG00000038286 501 0.896 - - - 0.896 - - biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) [Source:MGI Symbol;Acc:MGI:1915271]
26. Mapkapk3 ENSMUSG00000032577 124 0.895 - - - 0.895 - - mitogen-activated protein kinase-activated protein kinase 3 [Source:MGI Symbol;Acc:MGI:2143163]
27. Prg2 ENSMUSG00000027073 50 0.895 - - - 0.895 - - proteoglycan 2, bone marrow [Source:MGI Symbol;Acc:MGI:103294]
28. Cbln3 ENSMUSG00000040380 51 0.894 - - - 0.894 - - cerebellin 3 precursor protein [Source:MGI Symbol;Acc:MGI:1889286]
29. Lefty1 ENSMUSG00000038793 35 0.894 - - - 0.894 - - left right determination factor 1 [Source:MGI Symbol;Acc:MGI:107405]
30. Gm6153 ENSMUSG00000090994 31 0.888 - - - 0.888 - - predicted gene 6153 [Source:MGI Symbol;Acc:MGI:3645798]
31. Cxcl16 ENSMUSG00000018920 38 0.886 - - - 0.886 - - chemokine (C-X-C motif) ligand 16 [Source:MGI Symbol;Acc:MGI:1932682]
32. Gm8756 ENSMUSG00000098238 52 0.884 - - - 0.884 - - predicted gene 8756 [Source:MGI Symbol;Acc:MGI:3644333]
33. Fgl2 ENSMUSG00000039899 55 0.884 - - - 0.884 - - fibrinogen-like protein 2 [Source:MGI Symbol;Acc:MGI:103266]
34. Gm25835 ENSMUSG00000089542 30 0.884 - - - 0.884 - - predicted gene, 25835 [Source:MGI Symbol;Acc:MGI:5455612]
35. Ptprc ENSMUSG00000026395 57 0.879 - - - 0.879 - - protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
36. Gm16416 ENSMUSG00000095940 68 0.877 - - - 0.877 - - predicted gene 16416 [Source:MGI Symbol;Acc:MGI:3646635]
37. Sla2 ENSMUSG00000027636 24 0.877 - - - 0.877 - - Src-like-adaptor 2 [Source:MGI Symbol;Acc:MGI:1925049]
38. Clec4a1 ENSMUSG00000049037 53 0.876 - - - 0.876 - - C-type lectin domain family 4, member a1 [Source:MGI Symbol;Acc:MGI:3036291]
39. C1ra ENSMUSG00000055172 76 0.872 - - - 0.872 - - complement component 1, r subcomponent A [Source:MGI Symbol;Acc:MGI:1355313]
40. Slpi ENSMUSG00000017002 14 0.871 - - - 0.871 - - secretory leukocyte peptidase inhibitor [Source:MGI Symbol;Acc:MGI:109297]
41. Neat1 ENSMUSG00000092274 205 0.87 - - - 0.870 - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
42. Gna15 ENSMUSG00000034792 26 0.867 - - - 0.867 - - guanine nucleotide binding protein, alpha 15 [Source:MGI Symbol;Acc:MGI:95770]
43. Tfr2 ENSMUSG00000029716 51 0.867 - - - 0.867 - - transferrin receptor 2 [Source:MGI Symbol;Acc:MGI:1354956]
44. Arhgdig ENSMUSG00000073433 60 0.866 - - - 0.866 - - Rho GDP dissociation inhibitor (GDI) gamma [Source:MGI Symbol;Acc:MGI:108430]
45. Rbm41 ENSMUSG00000031433 71 0.865 - - - 0.865 - - RNA binding motif protein 41 [Source:MGI Symbol;Acc:MGI:2444923]
46. Shank3 ENSMUSG00000022623 139 0.865 - - - 0.865 - - SH3 and multiple ankyrin repeat domains 3 [Source:MGI Symbol;Acc:MGI:1930016]
47. Cfi ENSMUSG00000058952 17 0.862 - - - 0.862 - - complement component factor i [Source:MGI Symbol;Acc:MGI:105937]
48. Sepsecs ENSMUSG00000029173 384 0.859 - - - 0.859 - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:MGI Symbol;Acc:MGI:1098791]
49. Parvg ENSMUSG00000022439 145 0.859 - - - 0.859 - - parvin, gamma [Source:MGI Symbol;Acc:MGI:2158329]
50. Rnf24 ENSMUSG00000048911 64 0.859 - - - 0.859 - - ring finger protein 24 [Source:MGI Symbol;Acc:MGI:1261771]
51. Slc2a10 ENSMUSG00000027661 105 0.858 - - - 0.858 - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:MGI Symbol;Acc:MGI:2156687]
52. Abhd14b ENSMUSG00000042073 300 0.856 - - - 0.856 - - abhydrolase domain containing 14b [Source:MGI Symbol;Acc:MGI:1923741]
53. Rnmtl1 333 0.856 - - - 0.856 - - RNA methyltransferase like 1, transcript variant X1
54. Gstm3 ENSMUSG00000004038 25 0.855 - - - 0.855 - - glutathione S-transferase, mu 3 [Source:MGI Symbol;Acc:MGI:106026]
55. Milr1 ENSMUSG00000040528 46 0.854 - - - 0.854 - - mast cell immunoglobulin like receptor 1 [Source:MGI Symbol;Acc:MGI:2685731]
56. Cd36 ENSMUSG00000002944 142 0.854 - - - 0.854 - - CD36 molecule [Source:MGI Symbol;Acc:MGI:107899]
57. Hrasls ENSMUSG00000022525 23 0.853 - - - - - 0.853 HRAS-like suppressor [Source:MGI Symbol;Acc:MGI:1351473]
58. Tbx4 ENSMUSG00000000094 350 0.853 - - - 0.853 - - T-box 4 [Source:MGI Symbol;Acc:MGI:102556]
59. Dock8 ENSMUSG00000052085 64 0.852 - - - 0.852 - - dedicator of cytokinesis 8 [Source:MGI Symbol;Acc:MGI:1921396]
60. Gnaz ENSMUSG00000040009 721 0.851 - - - 0.851 - - guanine nucleotide binding protein, alpha z subunit [Source:MGI Symbol;Acc:MGI:95780]
61. Mpeg1 ENSMUSG00000046805 63 0.851 - - - 0.851 - - macrophage expressed gene 1 [Source:MGI Symbol;Acc:MGI:1333743]
62. Iah1 ENSMUSG00000062054 750 0.85 - - - 0.850 - - isoamyl acetate-hydrolyzing esterase 1 homolog [Source:MGI Symbol;Acc:MGI:1914982]
63. Eps8 ENSMUSG00000015766 242 0.849 - - - 0.849 - - epidermal growth factor receptor pathway substrate 8 [Source:MGI Symbol;Acc:MGI:104684]
64. Dram1 ENSMUSG00000020057 43 0.849 - - - 0.849 - - DNA-damage regulated autophagy modulator 1 [Source:MGI Symbol;Acc:MGI:1918962]
65. 2900053O20Rik 2900053O20Rik 125 0.845 - - - 0.845 - -
66. Hps6 ENSMUSG00000074811 74 0.843 - - - 0.843 - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:MGI Symbol;Acc:MGI:2181763]
67. Galm ENSMUSG00000035473 269 0.843 - - - 0.843 - - galactose mutarotase [Source:MGI Symbol;Acc:MGI:2442420]
68. Gm13166 ENSMUSG00000085525, ENSMUSG00000116487 110 0.842 - - - 0.842 - - predicted gene 13166 [Source:MGI Symbol;Acc:MGI:3705130]
69. Tapbp ENSMUSG00000024308 349 0.841 - - - 0.841 - - TAP binding protein [Source:MGI Symbol;Acc:MGI:1201689]
70. Slc39a8 ENSMUSG00000053897 431 0.841 - - - 0.841 - - solute carrier family 39 (metal ion transporter), member 8 [Source:MGI Symbol;Acc:MGI:1914797]
71. Atp1b2 ENSMUSG00000041329 647 0.836 - - - 0.836 - - ATPase, Na+/K+ transporting, beta 2 polypeptide [Source:MGI Symbol;Acc:MGI:88109]
72. Sgsh ENSMUSG00000005043 196 0.836 - - - 0.836 - - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:MGI Symbol;Acc:MGI:1350341]
73. Gtf2h3 ENSMUSG00000029387 661 0.834 - - - 0.834 - - general transcription factor IIH, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1277143]
74. Spta1 ENSMUSG00000026532 64 0.834 - - - 0.834 - - spectrin alpha, erythrocytic 1 [Source:MGI Symbol;Acc:MGI:98385]
75. Lyz2 ENSMUSG00000069516 230 0.83 - - - 0.830 - - lysozyme 2 [Source:MGI Symbol;Acc:MGI:96897]
76. Gm9840 154 0.826 - - - 0.826 - - predicted gene 9840, transcript variant X1
77. Gipc2 ENSMUSG00000039131 66 0.826 - - - 0.826 - - GIPC PDZ domain containing family, member 2 [Source:MGI Symbol;Acc:MGI:1889209]
78. Selplg ENSMUSG00000048163 40 0.825 - - - 0.825 - - selectin, platelet (p-selectin) ligand [Source:MGI Symbol;Acc:MGI:106689]
79. Gm10036 ENSMUSG00000058064 122 0.825 - - - 0.825 - - predicted gene 10036 [Source:MGI Symbol;Acc:MGI:3642334]
80. Epg5 ENSMUSG00000039840, ENSMUSG00000116023 269 0.823 - - - 0.823 - - ectopic P-granules autophagy protein 5 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1918673]
81. Snhg9 ENSMUSG00000090101 136 0.823 - - - 0.823 - - small nucleolar RNA host gene 9 [Source:MGI Symbol;Acc:MGI:1920724]
82. Tnfaip2 ENSMUSG00000021281 214 0.82 - - - 0.820 - - tumor necrosis factor, alpha-induced protein 2 [Source:MGI Symbol;Acc:MGI:104960]
83. Rhox5 ENSMUSG00000095180, ENSMUSG00000097306 136 0.819 - - - 0.819 - - reproductive homeobox 5 [Source:MGI Symbol;Acc:MGI:97538]
84. Sec16b ENSMUSG00000026589 80 0.818 - - - 0.818 - - SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
85. Prkcd ENSMUSG00000021948 898 0.803 - - - 0.803 - - protein kinase C, delta [Source:MGI Symbol;Acc:MGI:97598]
86. Zfp687 ENSMUSG00000019338 583 0.802 - - - 0.802 - - zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
87. D330041H03Rik ENSMUSG00000073437 127 0.8 - - - 0.800 - - RIKEN cDNA D330041H03 gene [Source:MGI Symbol;Acc:MGI:3603827]
88. Gm5422 ENSMUSG00000039684 184 0.799 - - - 0.799 - - predicted pseudogene 5422 [Source:MGI Symbol;Acc:MGI:3643411]
89. Gm4189 ENSMUSG00000092384 32 0.798 - - - 0.798 - - predicted gene 4189 [Source:MGI Symbol;Acc:MGI:3782365]
90. Slc22a3 ENSMUSG00000023828 78 0.796 - - - 0.796 - - solute carrier family 22 (organic cation transporter), member 3 [Source:MGI Symbol;Acc:MGI:1333817]
91. Disc1 ENSMUSG00000043051 168 0.794 - - - 0.794 - - disrupted in schizophrenia 1 [Source:MGI Symbol;Acc:MGI:2447658]
92. Gm20682 ENSMUSG00000093465 120 0.793 - - - - - 0.793 predicted gene 20682 [Source:MGI Symbol;Acc:MGI:5313129]
93. Fam84a ENSMUSG00000020607 146 0.792 - - - 0.792 - - family with sequence similarity 84, member A [Source:MGI Symbol;Acc:MGI:2145011]
94. C1qc ENSMUSG00000036896 325 0.79 - - - 0.790 - - complement component 1, q subcomponent, C chain [Source:MGI Symbol;Acc:MGI:88225]
95. Rrp1 ENSMUSG00000061032 3455 0.789 - - - 0.789 - - ribosomal RNA processing 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1203500]
96. Nmnat3 ENSMUSG00000032456 69 0.788 - - - 0.788 - - nicotinamide nucleotide adenylyltransferase 3 [Source:MGI Symbol;Acc:MGI:1921330]
97. Polr3h ENSMUSG00000022476 881 0.788 - - - 0.788 - - polymerase (RNA) III (DNA directed) polypeptide H [Source:MGI Symbol;Acc:MGI:1926179]
98. Grin2d ENSMUSG00000002771 119 0.786 - - - 0.786 - - glutamate receptor, ionotropic, NMDA2D (epsilon 4) [Source:MGI Symbol;Acc:MGI:95823]
99. Hist1h1d ENSMUSG00000052565 183 0.785 - - - 0.785 - - histone cluster 1, H1d [Source:MGI Symbol;Acc:MGI:107502]
100. Rgn ENSMUSG00000023070 86 0.785 - - - 0.785 - - regucalcin [Source:MGI Symbol;Acc:MGI:108024]

There are 96 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA