Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Srl

Gene Name Gene ID Reads Annotation
Srl ENSMUSG00000022519 577 sarcalumenin [Source:MGI Symbol;Acc:MGI:2146620]







Genes with expression patterns similar to Srl

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Srl ENSMUSG00000022519 577 6 1.000 1.000 1.000 1.000 1.000 1.000 sarcalumenin [Source:MGI Symbol;Acc:MGI:2146620]
2. Myl1 ENSMUSG00000061816 2895 1.623 - - - - 0.771 0.852 myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
3. Fibin ENSMUSG00000074971 907 1.622 - - - - 0.800 0.822 fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
4. Grin3a ENSMUSG00000039579 433 1.583 - - 0.830 - 0.753 - glutamate receptor ionotropic, NMDA3A [Source:MGI Symbol;Acc:MGI:1933206]
5. Myh3 ENSMUSG00000020908 1729 1.582 - - - - 0.774 0.808 myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
6. Actc1 ENSMUSG00000068614 13555 1.572 - - - - 0.740 0.832 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
7. Neb ENSMUSG00000026950 948 1.501 - - - - 0.780 0.721 nebulin [Source:MGI Symbol;Acc:MGI:97292]
8. Ttn ENSMUSG00000051747 3015 1.496 - - - - 0.750 0.746 titin [Source:MGI Symbol;Acc:MGI:98864]
9. Synpo2l ENSMUSG00000039376 565 1.493 - - - - 0.765 0.728 synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
10. Myl4 ENSMUSG00000061086 819 1.486 - - - - 0.742 0.744 myosin, light polypeptide 4 [Source:MGI Symbol;Acc:MGI:97267]
11. Dmrt2 ENSMUSG00000048138 949 1.483 - - 0.767 - - 0.716 doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
12. Myf5 ENSMUSG00000000435 593 1.471 - - - - 0.730 0.741 myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252]
13. Tnnt2 ENSMUSG00000026414 1982 1.417 - - - - 0.713 0.704 troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
14. Slc38a9 ENSMUSG00000047789 646 0.947 0.947 - - - - - solute carrier family 38, member 9 [Source:MGI Symbol;Acc:MGI:1918839]
15. Lipg ENSMUSG00000053846 221 0.94 0.940 - - - - - lipase, endothelial [Source:MGI Symbol;Acc:MGI:1341803]
16. Camkv ENSMUSG00000032936 71 0.94 0.940 - - - - - CaM kinase-like vesicle-associated [Source:MGI Symbol;Acc:MGI:2384296]
17. Cdk6 ENSMUSG00000040274 355 0.938 0.938 - - - - - cyclin-dependent kinase 6 [Source:MGI Symbol;Acc:MGI:1277162]
18. Gm16459 ENSMUSG00000084022 255 0.936 0.936 - - - - - predicted gene 16459 [Source:MGI Symbol;Acc:MGI:3644110]
19. Asap3 ENSMUSG00000036995 98 0.935 0.935 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:MGI Symbol;Acc:MGI:2684986]
20. Gm14760 ENSMUSG00000081221 37 0.935 0.935 - - - - - predicted gene 14760 [Source:MGI Symbol;Acc:MGI:3709612]
21. Pdik1l ENSMUSG00000050890 697 0.935 0.935 - - - - - PDLIM1 interacting kinase 1 like [Source:MGI Symbol;Acc:MGI:2385213]
22. BC039771 291 0.935 0.935 - - - - - cDNA sequence BC039771
23. Gm15696 ENSMUSG00000083853 35 0.934 0.934 - - - - - predicted gene 15696 [Source:MGI Symbol;Acc:MGI:3783137]
24. Scrg1 ENSMUSG00000031610 40 0.934 0.934 - - - - - scrapie responsive gene 1 [Source:MGI Symbol;Acc:MGI:1328308]
25. Tceal6 ENSMUSG00000031409 119 0.934 0.934 - - - - - transcription elongation factor A (SII)-like 6 [Source:MGI Symbol;Acc:MGI:1923939]
26. 4930432K21Rik ENSMUSG00000008129 59 0.934 0.934 - - - - - RIKEN cDNA 4930432K21 gene [Source:MGI Symbol;Acc:MGI:1921916]
27. Ccdc146 ENSMUSG00000064280 65 0.934 0.934 - - - - - coiled-coil domain containing 146 [Source:MGI Symbol;Acc:MGI:1922422]
28. Ptma-ps1 ENSMUSG00000095331 29 0.934 0.934 - - - - - prothymosin alpha, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644252]
29. Gm12029 ENSMUSG00000081820 26 0.934 0.934 - - - - - predicted gene 12029 [Source:MGI Symbol;Acc:MGI:3651192]
30. Hist1h4k ENSMUSG00000064288 71 0.933 0.933 - - - - - histone cluster 1, H4k [Source:MGI Symbol;Acc:MGI:2448439]
31. Gm15703 ENSMUSG00000083890 47 0.933 0.933 - - - - - predicted gene 15703 [Source:MGI Symbol;Acc:MGI:3783143]
32. Zfp354b ENSMUSG00000020335 56 0.933 0.933 - - - - - zinc finger protein 354B [Source:MGI Symbol;Acc:MGI:1351476]
33. Gm11217 ENSMUSG00000085032 29 0.933 0.933 - - - - - predicted gene 11217 [Source:MGI Symbol;Acc:MGI:3651042]
34. Ikzf4 ENSMUSG00000002578 522 0.932 0.932 - - - - - IKAROS family zinc finger 4 [Source:MGI Symbol;Acc:MGI:1343139]
35. Polg2 ENSMUSG00000020718 273 0.932 0.932 - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:MGI Symbol;Acc:MGI:1354947]
36. Gm27010 ENSMUSG00000098183 452 0.931 0.931 - - - - - predicted gene, 27010 [Source:MGI Symbol;Acc:MGI:5504125]
37. Mtfp1 ENSMUSG00000004748 496 0.93 0.930 - - - - - mitochondrial fission process 1 [Source:MGI Symbol;Acc:MGI:1916686]
38. Ogg1 ENSMUSG00000030271 242 0.93 0.930 - - - - - 8-oxoguanine DNA-glycosylase 1 [Source:MGI Symbol;Acc:MGI:1097693]
39. Mgat4a ENSMUSG00000026110 296 0.929 0.929 - - - - - mannoside acetylglucosaminyltransferase 4, isoenzyme A [Source:MGI Symbol;Acc:MGI:2662992]
40. Tnip1 ENSMUSG00000020400 414 0.929 0.929 - - - - - TNFAIP3 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1926194]
41. Htra2 ENSMUSG00000068329 44 0.928 0.928 - - - - - HtrA serine peptidase 2 [Source:MGI Symbol;Acc:MGI:1928676]
42. Fgf5 ENSMUSG00000029337 249 0.928 0.928 - - - - - fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
43. Zfp13 ENSMUSG00000062012 261 0.928 0.928 - - - - - zinc finger protein 13 [Source:MGI Symbol;Acc:MGI:99159]
44. Vps8 ENSMUSG00000033653 284 0.928 0.928 - - - - - VPS8 CORVET complex subunit [Source:MGI Symbol;Acc:MGI:2146407]
45. Brox ENSMUSG00000046836 1657 0.927 0.927 - - - - - BRO1 domain and CAAX motif containing [Source:MGI Symbol;Acc:MGI:1918928]
46. Lmln ENSMUSG00000022802 160 0.927 0.927 - - - - - leishmanolysin-like (metallopeptidase M8 family) [Source:MGI Symbol;Acc:MGI:2444736]
47. Fahd2a ENSMUSG00000027371 222 0.926 0.926 - - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
48. Pnpla2 ENSMUSG00000025509 905 0.924 0.924 - - - - - patatin-like phospholipase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914103]
49. Gm24854 ENSMUSG00000088650 314 0.923 0.923 - - - - - predicted gene, 24854 [Source:MGI Symbol;Acc:MGI:5454631]
50. Nr2c2ap ENSMUSG00000071078 241 0.923 0.923 - - - - - nuclear receptor 2C2-associated protein [Source:MGI Symbol;Acc:MGI:1922942]
51. Polh ENSMUSG00000023953 65 0.923 0.923 - - - - - polymerase (DNA directed), eta (RAD 30 related) [Source:MGI Symbol;Acc:MGI:1891457]
52. Slc27a6 ENSMUSG00000024600 60 0.922 0.922 - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:MGI Symbol;Acc:MGI:3036230]
53. Kirrel ENSMUSG00000041734 243 0.922 0.922 - - - - - kirre like nephrin family adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1891396]
54. RP24-289J12.1 RP24-289J12.1 254 0.92 0.920 - - - - -
55. Ndfip1 ENSMUSG00000024425 231 0.919 0.919 - - - - - Nedd4 family interacting protein 1 [Source:MGI Symbol;Acc:MGI:1929601]
56. Tmem161b ENSMUSG00000035762 229 0.919 0.919 - - - - - transmembrane protein 161B [Source:MGI Symbol;Acc:MGI:1919995]
57. Pycrl ENSMUSG00000022571 5650 0.918 0.918 - - - - - pyrroline-5-carboxylate reductase-like [Source:MGI Symbol;Acc:MGI:1913444]
58. Col25a1 ENSMUSG00000058897 866 0.918 0.918 - - - - - collagen, type XXV, alpha 1 [Source:MGI Symbol;Acc:MGI:1924268]
59. Slc4a4 ENSMUSG00000060961 235 0.917 0.917 - - - - - solute carrier family 4 (anion exchanger), member 4 [Source:MGI Symbol;Acc:MGI:1927555]
60. Gm20492 ENSMUSG00000092593 105 0.917 0.917 - - - - - predicted gene 20492 [Source:MGI Symbol;Acc:MGI:5141957]
61. Tango2 ENSMUSG00000013539, ENSMUSG00000098377 1209 0.917 0.917 - - - - - transport and golgi organization 2 [Source:MGI Symbol;Acc:MGI:101825]
62. Cntrob ENSMUSG00000032782 747 0.916 0.916 - - - - - centrobin, centrosomal BRCA2 interacting protein [Source:MGI Symbol;Acc:MGI:2443290]
63. Cradd ENSMUSG00000045867 347 0.915 0.915 - - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:MGI Symbol;Acc:MGI:1336168]
64. Bsdc1 ENSMUSG00000040859 234 0.911 0.911 - - - - - BSD domain containing 1 [Source:MGI Symbol;Acc:MGI:1913466]
65. 2900053O20Rik 2900053O20Rik 125 0.91 0.910 - - - - -
66. Tfb2m ENSMUSG00000026492 253 0.908 0.908 - - - - - transcription factor B2, mitochondrial [Source:MGI Symbol;Acc:MGI:107937]
67. Upf3a ENSMUSG00000038398 402 0.908 0.908 - - - - - UPF3 regulator of nonsense transcripts homolog A (yeast) [Source:MGI Symbol;Acc:MGI:1914281]
68. Gm14290 Gm14290 85 0.906 0.906 - - - - -
69. Gm12088 ENSMUSG00000086707 296 0.906 0.906 - - - - - predicted gene 12088 [Source:MGI Symbol;Acc:MGI:3650337]
70. Epn2 ENSMUSG00000001036 1070 0.903 0.903 - - - - - epsin 2 [Source:MGI Symbol;Acc:MGI:1333766]
71. Usp40 ENSMUSG00000005501 1265 0.903 0.903 - - - - - ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
72. Abhd14b ENSMUSG00000042073 300 0.903 0.903 - - - - - abhydrolase domain containing 14b [Source:MGI Symbol;Acc:MGI:1923741]
73. Fn3krp ENSMUSG00000039253 676 0.902 0.902 - - - - - fructosamine 3 kinase related protein [Source:MGI Symbol;Acc:MGI:2679256]
74. Pdia5 ENSMUSG00000022844 1610 0.9 0.900 - - - - - protein disulfide isomerase associated 5 [Source:MGI Symbol;Acc:MGI:1919849]
75. St8sia2 ENSMUSG00000025789 3710 0.9 0.900 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:106020]
76. Gm21917 ENSMUSG00000096111 466 0.899 0.899 - - - - - predicted gene, 21917 [Source:MGI Symbol;Acc:MGI:5434081]
77. A930033H14Rik ENSMUSG00000090622 197 0.899 0.899 - - - - - RIKEN cDNA A930033H14 gene [Source:MGI Symbol;Acc:MGI:2444562]
78. Ryr1 ENSMUSG00000030592 284 0.899 - - 0.899 - - - ryanodine receptor 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:99659]
79. Uaca ENSMUSG00000034485 405 0.899 0.899 - - - - - uveal autoantigen with coiled-coil domains and ankyrin repeats [Source:MGI Symbol;Acc:MGI:1919815]
80. Nit1 ENSMUSG00000013997 660 0.896 0.896 - - - - - nitrilase 1 [Source:MGI Symbol;Acc:MGI:1350916]
81. Gm15051 Gm15051 144 0.896 0.896 - - - - -
82. Zfp219 ENSMUSG00000049295 199 0.896 0.896 - - - - - zinc finger protein 219 [Source:MGI Symbol;Acc:MGI:1917140]
83. Vill ENSMUSG00000038775 297 0.894 0.894 - - - - - villin-like [Source:MGI Symbol;Acc:MGI:1201781]
84. Spats2l ENSMUSG00000038305 220 0.894 0.894 - - - - - spermatogenesis associated, serine-rich 2-like [Source:MGI Symbol;Acc:MGI:1914448]
85. Cebpb ENSMUSG00000056501 245 0.894 0.894 - - - - - CCAAT/enhancer binding protein (C/EBP), beta [Source:MGI Symbol;Acc:MGI:88373]
86. Dera ENSMUSG00000030225 1240 0.894 0.894 - - - - - deoxyribose-phosphate aldolase (putative) [Source:MGI Symbol;Acc:MGI:1913762]
87. Ddx25 ENSMUSG00000032101 555 0.893 0.893 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Source:MGI Symbol;Acc:MGI:1353582]
88. Alox8 ENSMUSG00000020891 145 0.892 0.892 - - - - - arachidonate 8-lipoxygenase [Source:MGI Symbol;Acc:MGI:1098228]
89. Ubash3b ENSMUSG00000032020 698 0.892 0.892 - - - - - ubiquitin associated and SH3 domain containing, B [Source:MGI Symbol;Acc:MGI:1920078]
90. Klhl6 ENSMUSG00000043008 952 0.891 0.891 - - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
91. Coprs ENSMUSG00000031458 1554 0.89 0.890 - - - - - coordinator of PRMT5, differentiation stimulator [Source:MGI Symbol;Acc:MGI:1913673]
92. 1500011K16Rik ENSMUSG00000051319 584 0.89 0.890 - - - - - RIKEN cDNA 1500011K16 gene [Source:MGI Symbol;Acc:MGI:1915135]
93. 1700049G17Rik 282 0.889 0.889 - - - - - RIKEN cDNA 1700049G17 gene
94. 2310045N01Rik 2310045N01Rik 627 0.887 0.887 - - - - -
95. Rab38 ENSMUSG00000030559 161 0.886 0.886 - - - - - RAB38, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1919683]
96. Hspbap1 ENSMUSG00000022849 273 0.885 0.885 - - - - - Hspb associated protein 1 [Source:MGI Symbol;Acc:MGI:1913917]
97. Uba6 ENSMUSG00000035898 1221 0.884 0.884 - - - - - ubiquitin-like modifier activating enzyme 6 [Source:MGI Symbol;Acc:MGI:1913894]
98. Cep152 ENSMUSG00000068394 643 0.883 0.883 - - - - - centrosomal protein 152 [Source:MGI Symbol;Acc:MGI:2139083]
99. 2310011J03Rik ENSMUSG00000020133 379 0.882 0.882 - - - - - RIKEN cDNA 2310011J03 gene [Source:MGI Symbol;Acc:MGI:1913624]
100. Snx21 ENSMUSG00000050373 473 0.88 0.880 - - - - - sorting nexin family member 21 [Source:MGI Symbol;Acc:MGI:1917729]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA