Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Sncg

Gene Name Gene ID Reads Annotation
Sncg ENSMUSG00000023064 1702 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]







Genes with expression patterns similar to Sncg

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sncg ENSMUSG00000023064 1702 6 1.000 1.000 1.000 1.000 1.000 1.000 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
2. Nefl ENSMUSG00000022055 4031 4.474 - 0.910 0.809 0.898 0.944 0.913 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
3. Stmn2 ENSMUSG00000027500 6200 4.466 - 0.915 0.870 0.902 0.888 0.891 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
4. Gap43 ENSMUSG00000047261 5946 4.269 - 0.863 0.834 0.846 0.869 0.857 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
5. Rtn1 ENSMUSG00000021087 2547 4.14 - 0.827 0.765 0.842 0.899 0.807 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
6. Lhx3 ENSMUSG00000026934 117 4.1 0.767 0.913 - 0.825 0.762 0.833 LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
7. Crmp1 ENSMUSG00000029121 3165 3.859 - 0.849 0.740 0.714 0.768 0.788 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
8. Stmn3 ENSMUSG00000027581 1327 3.548 - 0.838 - 0.882 0.932 0.896 stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
9. Ina ENSMUSG00000034336 3835 3.444 - 0.921 - 0.874 0.853 0.796 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
10. Actl6b ENSMUSG00000029712 203 3.385 - 0.828 - 0.860 0.872 0.825 actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
11. Rbfox1 ENSMUSG00000008658 758 3.371 - 0.870 - 0.762 0.837 0.902 RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:MGI Symbol;Acc:MGI:1926224]
12. Slc10a4 ENSMUSG00000029219 550 3.349 - 0.939 - 0.821 0.812 0.777 solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
13. Nyap2 ENSMUSG00000054976 115 3.343 - 0.810 0.846 - 0.801 0.886 neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 [Source:MGI Symbol;Acc:MGI:2443135]
14. Rab3c ENSMUSG00000021700 370 3.342 - 0.811 - 0.871 0.805 0.855 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
15. Mllt11 ENSMUSG00000053192 1776 3.336 - 0.865 - 0.761 0.900 0.810 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
16. Nefm ENSMUSG00000022054 2534 3.306 - 0.880 - 0.717 0.845 0.864 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
17. Rufy3 ENSMUSG00000029291 695 3.292 - 0.876 - 0.748 0.836 0.832 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
18. Cadps ENSMUSG00000054423 870 3.276 - 0.896 - 0.778 0.833 0.769 Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
19. Dcx ENSMUSG00000031285 1733 3.266 - 0.816 - 0.845 0.863 0.742 doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
20. L1cam ENSMUSG00000031391 813 3.265 - 0.768 - 0.796 0.877 0.824 L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]
21. Kif5a ENSMUSG00000074657 425 3.083 0.706 0.835 - 0.790 0.752 - kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
22. Mapt ENSMUSG00000018411 1834 2.74 - - - 0.934 0.896 0.910 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
23. Arhgap36 ENSMUSG00000036198 404 2.565 - 0.860 0.891 - - 0.814 Rho GTPase activating protein 36 [Source:MGI Symbol;Acc:MGI:1922654]
24. Cdk5r1 ENSMUSG00000048895 2376 2.519 - - - 0.813 0.834 0.872 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
25. Prdm8 ENSMUSG00000035456 310 2.477 - - - 0.790 0.883 0.804 PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
26. Nmnat2 ENSMUSG00000042751 205 2.456 - - - 0.818 0.787 0.851 nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
27. Uchl1 ENSMUSG00000029223 2803 2.428 - - - 0.794 0.814 0.820 ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
28. Fgfbp3 ENSMUSG00000047632 2036 2.426 - - - 0.813 0.851 0.762 fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
29. Lhx4 ENSMUSG00000026468 214 2.4 - 0.920 - 0.750 - 0.730 LIM homeobox protein 4 [Source:MGI Symbol;Acc:MGI:101776]
30. Uts2b ENSMUSG00000056423 294 2.375 - 0.755 - - 0.708 0.912 urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
31. Elavl2 ENSMUSG00000008489 2109 2.367 - 0.898 - 0.758 0.711 - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
32. 3110035E14Rik 204 2.361 - - - 0.800 0.819 0.742 RIKEN cDNA 3110035E14 gene
33. Myt1l ENSMUSG00000061911 81 2.354 - - - 0.776 0.787 0.791 myelin transcription factor 1-like [Source:MGI Symbol;Acc:MGI:1100511]
34. Fam155a ENSMUSG00000079157 182 2.305 - - - 0.717 0.871 0.717 family with sequence similarity 155, member A [Source:MGI Symbol;Acc:MGI:2142765]
35. Disp2 ENSMUSG00000040035 230 2.296 - - - 0.801 0.738 0.757 dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
36. Tubb3 ENSMUSG00000062380 9211 2.275 - 0.841 - 0.720 0.714 - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
37. Apc2 ENSMUSG00000020135 328 2.264 - 0.787 - - 0.746 0.731 adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
38. Gng3 ENSMUSG00000071658 2104 2.258 - - - 0.800 0.718 0.740 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
39. Crtac1 ENSMUSG00000042401 228 2.258 0.719 0.754 - 0.785 - - cartilage acidic protein 1 [Source:MGI Symbol;Acc:MGI:1920082]
40. Stmn4 ENSMUSG00000022044 140 2.247 - 0.748 - - 0.751 0.748 stathmin-like 4 [Source:MGI Symbol;Acc:MGI:1931224]
41. Syn1 ENSMUSG00000037217 289 2.244 - - - 0.733 0.740 0.771 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
42. Nkx6-1 ENSMUSG00000035187 377 2.214 0.710 - 0.775 - - 0.729 NK6 homeobox 1 [Source:MGI Symbol;Acc:MGI:1206039]
43. Snhg11 ENSMUSG00000044349 1353 1.747 - - - 0.795 0.952 - small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]
44. Rab6b ENSMUSG00000032549 1005 1.696 - - - - 0.891 0.805 RAB6B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:107283]
45. Vstm2l ENSMUSG00000037843 86 1.664 - - - - 0.875 0.789 V-set and transmembrane domain containing 2-like [Source:MGI Symbol;Acc:MGI:2685537]
46. Snap25 ENSMUSG00000027273 427 1.664 - - - - 0.847 0.817 synaptosomal-associated protein 25 [Source:MGI Symbol;Acc:MGI:98331]
47. Spock2 ENSMUSG00000058297 1096 1.632 - - - - 0.835 0.797 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
48. Sp8 ENSMUSG00000048562 219 1.617 - - - - 0.790 0.827 trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
49. Fam57b ENSMUSG00000058966 243 1.609 - - - - 0.844 0.765 family with sequence similarity 57, member B [Source:MGI Symbol;Acc:MGI:1916202]
50. Isl2 ENSMUSG00000032318 488 1.6 0.740 0.860 - - - - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
51. Kcnq2 ENSMUSG00000016346 94 1.59 - - - - 0.743 0.847 potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
52. Chodl ENSMUSG00000022860 172 1.586 - 0.765 0.821 - - - chondrolectin [Source:MGI Symbol;Acc:MGI:2179069]
53. Vsx1 ENSMUSG00000033080 23 1.556 - - - - 0.746 0.810 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
54. Rbfox3 ENSMUSG00000025576 384 1.552 - 0.804 - - - 0.748 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
55. Gpr45 ENSMUSG00000041907 12 1.545 - - - - 0.824 0.721 G protein-coupled receptor 45 [Source:MGI Symbol;Acc:MGI:2135882]
56. A930011O12Rik A930011O12Rik 359 1.544 - - - 0.806 - 0.738
57. Dpysl3 ENSMUSG00000024501 7004 1.542 - - - 0.741 0.801 - dihydropyrimidinase-like 3 [Source:MGI Symbol;Acc:MGI:1349762]
58. Kif5c ENSMUSG00000026764 1283 1.542 - - - - 0.818 0.724 kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
59. Ecel1 ENSMUSG00000026247 83 1.529 - 0.799 - - - 0.730 endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
60. Elavl4 ENSMUSG00000028546 6084 1.528 - 0.826 - 0.702 - - ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
61. Scg2 ENSMUSG00000050711 91 1.526 - 0.791 - - 0.735 - secretogranin II [Source:MGI Symbol;Acc:MGI:103033]
62. Scn3a ENSMUSG00000057182 420 1.525 - - 0.731 - 0.794 - sodium channel, voltage-gated, type III, alpha [Source:MGI Symbol;Acc:MGI:98249]
63. Nsg2 ENSMUSG00000020297 1718 1.513 - - - 0.750 0.763 - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
64. Acot7 ENSMUSG00000028937 5139 1.508 - - - 0.763 - 0.745 acyl-CoA thioesterase 7 [Source:MGI Symbol;Acc:MGI:1917275]
65. Snrpn ENSMUSG00000102252 2727 1.506 - - - 0.728 0.778 - small nuclear ribonucleoprotein N [Source:MGI Symbol;Acc:MGI:98347]
66. Ube2ql1 ENSMUSG00000052981 312 1.501 - - - - 0.766 0.735 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:MGI Symbol;Acc:MGI:1924230]
67. Tubb4a ENSMUSG00000062591 500 1.495 - 0.710 - - - 0.785 tubulin, beta 4A class IVA [Source:MGI Symbol;Acc:MGI:107848]
68. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 1.494 - 0.717 - 0.777 - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
69. Pak3 ENSMUSG00000031284 1014 1.484 - - - 0.713 0.771 - p21 (RAC1) activated kinase 3 [Source:MGI Symbol;Acc:MGI:1339656]
70. Ttyh1 ENSMUSG00000030428 279 1.482 - - - 0.765 0.717 - tweety family member 1 [Source:MGI Symbol;Acc:MGI:1889007]
71. Foxn4 ENSMUSG00000042002 22 1.48 - - - - 0.735 0.745 forkhead box N4 [Source:MGI Symbol;Acc:MGI:2151057]
72. Mapk8ip2 ENSMUSG00000022619 910 1.478 - - - - 0.771 0.707 mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
73. Sptbn2 ENSMUSG00000067889 4571 1.477 - - - - 0.775 0.702 spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
74. Nnat ENSMUSG00000067786 17900 1.474 - - 0.712 0.762 - - neuronatin [Source:MGI Symbol;Acc:MGI:104716]
75. Tmem130 ENSMUSG00000043388 34 1.471 - - - - 0.750 0.721 transmembrane protein 130 [Source:MGI Symbol;Acc:MGI:3607706]
76. Vsx2 ENSMUSG00000021239 34 1.468 - - - - 0.720 0.748 visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
77. Snap91 ENSMUSG00000033419 286 1.463 - 0.704 - - 0.759 - synaptosomal-associated protein 91 [Source:MGI Symbol;Acc:MGI:109132]
78. Slc6a1 ENSMUSG00000030310 22 1.454 - - - 0.703 0.751 - solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:MGI Symbol;Acc:MGI:95627]
79. Map2 ENSMUSG00000015222 2576 1.45 - 0.738 - 0.712 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
80. Ptprz1 ENSMUSG00000068748 159 1.443 - - - 0.716 - 0.727 protein tyrosine phosphatase, receptor type Z, polypeptide 1 [Source:MGI Symbol;Acc:MGI:97816]
81. Gdap1l1 ENSMUSG00000017943 143 1.438 - 0.728 - - 0.710 - ganglioside-induced differentiation-associated protein 1-like 1 [Source:MGI Symbol;Acc:MGI:2385163]
82. Gprin1 ENSMUSG00000069227 1013 1.437 - 0.732 - 0.705 - - G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
83. Pcsk1n ENSMUSG00000039278 245 1.432 - - - - 0.729 0.703 proprotein convertase subtilisin/kexin type 1 inhibitor [Source:MGI Symbol;Acc:MGI:1353431]
84. Scg3 ENSMUSG00000032181 445 1.425 - - - - 0.722 0.703 secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
85. Soga3 ENSMUSG00000038916 3972 1.413 - - 0.700 - 0.713 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
86. Prkar1b ENSMUSG00000025855 360 0.872 - - - - 0.872 - protein kinase, cAMP dependent regulatory, type I beta [Source:MGI Symbol;Acc:MGI:97759]
87. Th ENSMUSG00000000214 313 0.859 - 0.859 - - - - tyrosine hydroxylase [Source:MGI Symbol;Acc:MGI:98735]
88. Olig2 ENSMUSG00000039830 329 0.855 - 0.855 - - - - oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
89. 9330159F19Rik ENSMUSG00000004360 464 0.853 - - - - 0.853 - RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
90. B020004J07Rik ENSMUSG00000035201 23 0.848 - 0.848 - - - - RIKEN cDNA B020004J07 gene [Source:MGI Symbol;Acc:MGI:3588238]
91. Ndrg4 ENSMUSG00000036564 629 0.846 - - - - 0.846 - N-myc downstream regulated gene 4 [Source:MGI Symbol;Acc:MGI:2384590]
92. Aplp1 ENSMUSG00000006651 2792 0.844 - - - - 0.844 - amyloid beta (A4) precursor-like protein 1 [Source:MGI Symbol;Acc:MGI:88046]
93. Gabrb3 ENSMUSG00000033676 455 0.841 - - - 0.841 - - gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]
94. Rab3a ENSMUSG00000031840, ENSMUSG00000111277 252 0.838 - - - - 0.838 - RAB3A, member RAS onco family [Source:NCBI gene;Acc:19339]
95. Slc5a7 ENSMUSG00000023945 61 0.835 - - - - 0.835 - solute carrier family 5 (choline transporter), member 7 [Source:MGI Symbol;Acc:MGI:1927126]
96. Scrt2 ENSMUSG00000060257 121 0.833 - - 0.833 - - - scratch family zinc finger 2 [Source:MGI Symbol;Acc:MGI:2139287]
97. Reep1 ENSMUSG00000052852 1394 0.829 - - 0.829 - - - receptor accessory protein 1 [Source:MGI Symbol;Acc:MGI:1098827]
98. Eef1a2 ENSMUSG00000016349 41 0.827 - - - - 0.827 - eukaryotic translation elongation factor 1 alpha 2 [Source:MGI Symbol;Acc:MGI:1096317]
99. Slit2 ENSMUSG00000031558 1660 0.822 - 0.822 - - - - slit guidance ligand 2 [Source:MGI Symbol;Acc:MGI:1315205]
100. A730046J19Rik ENSMUSG00000085139 47 0.815 - - - - - 0.815 RIKEN cDNA A730046J19 gene [Source:MGI Symbol;Acc:MGI:2442684]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA