Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Smyd1

Gene Name Gene ID Reads Annotation
Smyd1 ENSMUSG00000055027 232 SET and MYND domain containing 1 [Source:MGI Symbol;Acc:MGI:104790]







Genes with expression patterns similar to Smyd1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smyd1 ENSMUSG00000055027 232 6 1.000 1.000 1.000 1.000 1.000 1.000 SET and MYND domain containing 1 [Source:MGI Symbol;Acc:MGI:104790]
2. Actn2 ENSMUSG00000052374 152 0.817 - - 0.817 - - - actinin alpha 2 [Source:MGI Symbol;Acc:MGI:109192]
3. Hic1 ENSMUSG00000043099 2437 0.809 - - 0.809 - - - hypermethylated in cancer 1 [Source:MGI Symbol;Acc:MGI:1338010]
4. Myom3 ENSMUSG00000037139 72 0.79 - - 0.790 - - - myomesin family, member 3 [Source:MGI Symbol;Acc:MGI:2685280]
5. Chrng ENSMUSG00000026253 108 0.754 - - 0.754 - - - cholinergic receptor, nicotinic, gamma polypeptide [Source:MGI Symbol;Acc:MGI:87895]
6. Gm6480 ENSMUSG00000082894 43 0.748 - - 0.748 - - - predicted pseudogene 6480 [Source:MGI Symbol;Acc:MGI:3647765]
7. Chrnb1 ENSMUSG00000041189 253 0.747 0.747 - - - - - cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) [Source:MGI Symbol;Acc:MGI:87890]
8. Tcap ENSMUSG00000007877 58 0.745 - - 0.745 - - - titin-cap [Source:MGI Symbol;Acc:MGI:1330233]
9. Fcrl6 ENSMUSG00000070504 5 0.744 - - 0.744 - - - Fc receptor-like 6 [Source:MGI Symbol;Acc:MGI:3618339]
10. Camk2a ENSMUSG00000024617 134 0.741 0.741 - - - - - calcium/calmodulin-dependent protein kinase II alpha [Source:MGI Symbol;Acc:MGI:88256]
11. Gm7862 ENSMUSG00000046580 35 0.739 0.739 - - - - - predicted gene 7862 [Source:MGI Symbol;Acc:MGI:3648002]
12. Gm1866 ENSMUSG00000082070 14 0.738 - - 0.738 - - - predicted gene 1866 [Source:MGI Symbol;Acc:MGI:3037724]
13. Rnu12 ENSMUSG00000065176 18 0.735 - - 0.735 - - - RNA U12, small nuclear [Source:MGI Symbol;Acc:MGI:1336893]
14. Mmp17 ENSMUSG00000029436 326 0.735 - - 0.735 - - - matrix metallopeptidase 17 [Source:MGI Symbol;Acc:MGI:1346076]
15. Gm5464 ENSMUSG00000075553 14 0.733 0.733 - - - - - predicted gene 5464 [Source:MGI Symbol;Acc:MGI:3643060]
16. Fam163b ENSMUSG00000009216 51 0.732 - - 0.732 - - - family with sequence similarity 163, member B [Source:MGI Symbol;Acc:MGI:1926106]
17. Tcp11l2 ENSMUSG00000020034 74 0.729 0.729 - - - - - t-complex 11 (mouse) like 2 [Source:MGI Symbol;Acc:MGI:2444679]
18. Myf5 ENSMUSG00000000435 593 0.728 - - 0.728 - - - myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252]
19. Cacng6 ENSMUSG00000078815, ENSMUSG00000097894 38 0.723 - - 0.723 - - - calcium channel, voltage-dependent, gamma subunit 6 [Source:MGI Symbol;Acc:MGI:1859168]
20. Gm9083 ENSMUSG00000083033 141 0.723 - - 0.723 - - - predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
21. Trdn ENSMUSG00000019787 30 0.722 - - 0.722 - - - triadin [Source:MGI Symbol;Acc:MGI:1924007]
22. Myl1 ENSMUSG00000061816 2895 0.722 - - 0.722 - - - myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
23. Myoz2 ENSMUSG00000028116 63 0.719 - - 0.719 - - - myozenin 2 [Source:MGI Symbol;Acc:MGI:1913063]
24. Eltd1 Eltd1 215 0.718 0.718 - - - - -
25. Tsx ENSMUSG00000031329 61 0.717 - - 0.717 - - - testis specific X-linked gene [Source:MGI Symbol;Acc:MGI:108118]
26. Kcnk13 ENSMUSG00000045404 16 0.717 - - 0.717 - - - potassium channel, subfamily K, member 13 [Source:MGI Symbol;Acc:MGI:2384976]
27. Otog ENSMUSG00000009487 14 0.716 - - 0.716 - - - otogelin [Source:MGI Symbol;Acc:MGI:1202064]
28. Apobec2 ENSMUSG00000040694, ENSMUSG00000116086 86 0.715 - - 0.715 - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 [Source:MGI Symbol;Acc:MGI:1343178]
29. 1110006G14Rik 1110006G14Rik 29 0.713 0.713 - - - - -
30. Gm4953 ENSMUSG00000061992 4 0.711 0.711 - - - - - predicted pseudogene 4953 [Source:MGI Symbol;Acc:MGI:3647627]
31. Gm5139 ENSMUSG00000093447 4 0.711 0.711 - - - - - predicted gene 5139 [Source:MGI Symbol;Acc:MGI:3779465]
32. 5330413P13Rik ENSMUSG00000086822 7 0.711 0.711 - - - - - RIKEN cDNA 5330413P13 gene [Source:MGI Symbol;Acc:MGI:3041161]
33. Prg4 ENSMUSG00000006014 30 0.711 0.711 - - - - - proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) [Source:MGI Symbol;Acc:MGI:1891344]
34. Gm13648 ENSMUSG00000086549 21 0.711 0.711 - - - - - predicted gene 13648 [Source:MGI Symbol;Acc:MGI:3652033]
35. Bmp10 ENSMUSG00000030046 4 0.711 0.711 - - - - - bone morphogenetic protein 10 [Source:MGI Symbol;Acc:MGI:1338820]
36. Tmprss6 ENSMUSG00000016942 9 0.711 0.711 - - - - - transmembrane serine protease 6 [Source:MGI Symbol;Acc:MGI:1919003]
37. Mybph ENSMUSG00000042451 38 0.711 - - 0.711 - - - myosin binding protein H [Source:MGI Symbol;Acc:MGI:1858196]
38. Tmem140 ENSMUSG00000057137 10 0.711 0.711 - - - - - transmembrane protein 140 [Source:MGI Symbol;Acc:MGI:1915737]
39. Gm17449 Gm17449 4 0.711 0.711 - - - - -
40. Trim34a ENSMUSG00000056144 39 0.711 0.711 - - - - - tripartite motif-containing 34A [Source:MGI Symbol;Acc:MGI:2137359]
41. Lrriq3 ENSMUSG00000028182 5 0.71 0.710 - - - - - leucine-rich repeats and IQ motif containing 3 [Source:MGI Symbol;Acc:MGI:1921685]
42. Pxdc1 ENSMUSG00000021411 44 0.71 - - 0.710 - - - PX domain containing 1 [Source:MGI Symbol;Acc:MGI:1914145]
43. Ankrd42 ENSMUSG00000041343 120 0.709 0.709 - - - - - ankyrin repeat domain 42 [Source:MGI Symbol;Acc:MGI:1921095]
44. Dynlt1-ps1 ENSMUSG00000082691 9 0.709 - - 0.709 - - - dynein light chain Tctex-type 1, pseuodogene 1 [Source:MGI Symbol;Acc:MGI:3642625]
45. Gjd4 ENSMUSG00000036855 30 0.708 - - 0.708 - - - gap junction protein, delta 4 [Source:MGI Symbol;Acc:MGI:2444990]
46. 4930480K23Rik ENSMUSG00000097284 105 0.708 0.708 - - - - - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
47. Pcdhb3 ENSMUSG00000045498 48 0.707 - - 0.707 - - - protocadherin beta 3 [Source:MGI Symbol;Acc:MGI:2136737]
48. Gm11953 ENSMUSG00000082816 13 0.706 - - 0.706 - - - predicted gene 11953 [Source:MGI Symbol;Acc:MGI:3649564]
49. Vamp7-ps ENSMUSG00000082519 28 0.705 - - 0.705 - - - vesicle-associated membrane protein 7, pseudogene [Source:MGI Symbol;Acc:MGI:3652239]
50. Gm13414 ENSMUSG00000087635 11 0.705 - - 0.705 - - - predicted gene 13414 [Source:MGI Symbol;Acc:MGI:3652154]
51. Cox6a2 ENSMUSG00000030785 138 0.704 - - 0.704 - - - cytochrome c oxidase subunit 6A2 [Source:MGI Symbol;Acc:MGI:104649]
52. Scara5 ENSMUSG00000022032 68 0.702 0.702 - - - - - scavenger receptor class A, member 5 [Source:MGI Symbol;Acc:MGI:1918395]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA