Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Smn1

Gene Name Gene ID Reads Annotation
Smn1 ENSMUSG00000021645 2287 survival motor neuron 1 [Source:MGI Symbol;Acc:MGI:109257]







Genes with expression patterns similar to Smn1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smn1 ENSMUSG00000021645 2287 6 1.000 1.000 1.000 1.000 1.000 1.000 survival motor neuron 1 [Source:MGI Symbol;Acc:MGI:109257]
2. Usp36 ENSMUSG00000033909 2464 0.881 - 0.881 - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
3. Ccne1 ENSMUSG00000002068 2574 0.871 - 0.871 - - - - cyclin E1 [Source:MGI Symbol;Acc:MGI:88316]
4. Sh3glb2 ENSMUSG00000026860 1046 0.867 - 0.867 - - - - SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
5. Pik3r2 ENSMUSG00000031834, ENSMUSG00000111826 1072 0.864 - 0.864 - - - - phosphoinositide-3-kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1098772]
6. Lias ENSMUSG00000029199 3267 0.864 - 0.864 - - - - lipoic acid synthetase [Source:MGI Symbol;Acc:MGI:1934604]
7. Tmem80 ENSMUSG00000025505 1620 0.863 - 0.863 - - - - transmembrane protein 80 [Source:MGI Symbol;Acc:MGI:1918698]
8. St3gal2 ENSMUSG00000031749 2401 0.861 - 0.861 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:99427]
9. Man2a1 ENSMUSG00000024085 1658 0.86 - 0.860 - - - - mannosidase 2, alpha 1 [Source:MGI Symbol;Acc:MGI:104669]
10. 2410015M20Rik ENSMUSG00000049760 1948 0.859 - 0.859 - - - - RIKEN cDNA 2410015M20 gene [Source:MGI Symbol;Acc:MGI:2442174]
11. Rrp1b ENSMUSG00000058392 1375 0.858 - 0.858 - - - - ribosomal RNA processing 1 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919712]
12. Ralbp1 ENSMUSG00000024096 4172 0.857 - 0.857 - - - - ralA binding protein 1 [Source:MGI Symbol;Acc:MGI:108466]
13. Ep400 ENSMUSG00000029505 7247 0.857 - 0.857 - - - - E1A binding protein p400 [Source:MGI Symbol;Acc:MGI:1276124]
14. Gatad2b ENSMUSG00000042390 1312 0.857 - 0.857 - - - - GATA zinc finger domain containing 2B [Source:MGI Symbol;Acc:MGI:2443225]
15. Tmcc1 ENSMUSG00000030126 2753 0.854 - 0.854 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
16. Zfp157 ENSMUSG00000036898 1185 0.854 - 0.854 - - - - zinc finger protein 157 [Source:MGI Symbol;Acc:MGI:1919404]
17. Prkag1 ENSMUSG00000067713 1318 0.853 - 0.853 - - - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:108411]
18. mt-Atp8 ENSMUSG00000064356 13180 0.853 - 0.853 - - - - mitochondrially encoded ATP synthase 8 [Source:MGI Symbol;Acc:MGI:99926]
19. Dync2h1 ENSMUSG00000047193 880 0.853 - 0.853 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:MGI Symbol;Acc:MGI:107736]
20. Rab11fip3 ENSMUSG00000037098 2238 0.853 - 0.853 - - - - RAB11 family interacting protein 3 (class II) [Source:MGI Symbol;Acc:MGI:2444431]
21. Trim8 ENSMUSG00000025034 1494 0.852 - 0.852 - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
22. Pom121 ENSMUSG00000053293 574 0.852 - 0.852 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
23. Larp7 ENSMUSG00000027968 2270 0.852 - 0.852 - - - - La ribonucleoprotein domain family, member 7 [Source:MGI Symbol;Acc:MGI:107634]
24. Mrpl44 ENSMUSG00000026248 1593 0.852 - 0.852 - - - - mitochondrial ribosomal protein L44 [Source:MGI Symbol;Acc:MGI:1916413]
25. Tmem246 ENSMUSG00000039611 866 0.851 - 0.851 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
26. Aldh4a1 ENSMUSG00000028737 1176 0.851 - 0.851 - - - - aldehyde dehydrogenase 4 family, member A1 [Source:MGI Symbol;Acc:MGI:2443883]
27. Fxr2 ENSMUSG00000018765 1650 0.85 - 0.850 - - - - fragile X mental retardation, autosomal homolog 2 [Source:MGI Symbol;Acc:MGI:1346074]
28. Kdm5c ENSMUSG00000025332 3846 0.85 - 0.850 - - - - lysine (K)-specific demethylase 5C [Source:MGI Symbol;Acc:MGI:99781]
29. Nsdhl ENSMUSG00000031349 1861 0.849 - 0.849 - - - - NAD(P) dependent steroid dehydrogenase-like [Source:MGI Symbol;Acc:MGI:1099438]
30. Gm5776 ENSMUSG00000099647 589 0.848 - 0.848 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
31. Ppp2cb ENSMUSG00000009630 2117 0.847 - 0.847 - - - - protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform [Source:MGI Symbol;Acc:MGI:1321161]
32. Nmral1 ENSMUSG00000063445 5289 0.847 - 0.847 - - - - NmrA-like family domain containing 1 [Source:MGI Symbol;Acc:MGI:1915074]
33. Lnp 1121 0.847 - 0.847 - - - - limb and neural patterns, transcript variant X4
34. Suclg2 ENSMUSG00000061838 465 0.846 - 0.846 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
35. Cnot6l ENSMUSG00000034724 2623 0.846 - 0.846 - - - - CCR4-NOT transcription complex, subunit 6-like [Source:MGI Symbol;Acc:MGI:2443154]
36. Pole ENSMUSG00000007080 3516 0.846 - 0.846 - - - - polymerase (DNA directed), epsilon [Source:MGI Symbol;Acc:MGI:1196391]
37. Uchl3 ENSMUSG00000022111 1835 0.842 - 0.842 - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:MGI Symbol;Acc:MGI:1355274]
38. Btbd9 ENSMUSG00000062202 1289 0.841 - 0.841 - - - - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
39. 0610009B22Rik ENSMUSG00000007777 752 0.841 - 0.841 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
40. Apoo ENSMUSG00000079508 815 0.841 - 0.841 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
41. Wac ENSMUSG00000024283 3263 0.84 - 0.840 - - - - WW domain containing adaptor with coiled-coil [Source:MGI Symbol;Acc:MGI:2387357]
42. Uvrag ENSMUSG00000035354 908 0.84 - 0.840 - - - - UV radiation resistance associated gene [Source:MGI Symbol;Acc:MGI:1925860]
43. Ccnl1 ENSMUSG00000027829 3125 0.84 - 0.840 - - - - cyclin L1 [Source:MGI Symbol;Acc:MGI:1922664]
44. Odf2 ENSMUSG00000026790 2846 0.839 - 0.839 - - - - outer dense fiber of sperm tails 2 [Source:MGI Symbol;Acc:MGI:1098824]
45. Zfp369 ENSMUSG00000021514 1130 0.839 - 0.839 - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
46. Sox5 ENSMUSG00000041540 1198 0.838 - 0.838 - - - - SRY (sex determining region Y)-box 5 [Source:MGI Symbol;Acc:MGI:98367]
47. Ing2 ENSMUSG00000063049 913 0.838 - 0.838 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
48. Gm25735 ENSMUSG00000092905 617 0.838 - 0.838 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
49. Bri3bp ENSMUSG00000037905 6269 0.837 - 0.837 - - - - Bri3 binding protein [Source:MGI Symbol;Acc:MGI:1924059]
50. Tbl1xr1 ENSMUSG00000027630 4091 0.837 - 0.837 - - - - transducin (beta)-like 1X-linked receptor 1 [Source:MGI Symbol;Acc:MGI:2441730]
51. Decr2 ENSMUSG00000036775 1047 0.836 - 0.836 - - - - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
52. Hmbs ENSMUSG00000032126 2858 0.835 - 0.835 - - - - hydroxymethylbilane synthase [Source:MGI Symbol;Acc:MGI:96112]
53. Rhbdf1 ENSMUSG00000020282 1113 0.835 - 0.835 - - - - rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
54. Zfp160 ENSMUSG00000067942 1222 0.835 - 0.835 - - - - zinc finger protein 160 [Source:MGI Symbol;Acc:MGI:108187]
55. 2010111I01Rik ENSMUSG00000021458 591 0.835 - 0.835 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
56. Zfp865 ENSMUSG00000074405 1223 0.834 - 0.834 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
57. Zbtb12 ENSMUSG00000049823 373 0.833 - 0.833 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
58. Wdr46 ENSMUSG00000024312 449 0.833 - 0.833 - - - - WD repeat domain 46 [Source:MGI Symbol;Acc:MGI:1931871]
59. Twf2 ENSMUSG00000023277 849 0.832 - 0.832 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
60. Tmem186 ENSMUSG00000043140 711 0.832 - 0.832 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
61. Ubtd1 ENSMUSG00000025171 336 0.832 - 0.832 - - - - ubiquitin domain containing 1 [Source:MGI Symbol;Acc:MGI:2385092]
62. Pla2g15 ENSMUSG00000031903 321 0.831 - 0.831 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
63. Npas3 ENSMUSG00000021010 2049 0.831 - 0.831 - - - - neuronal PAS domain protein 3 [Source:MGI Symbol;Acc:MGI:1351610]
64. Emc2 ENSMUSG00000022337 2066 0.831 - 0.831 - - - - ER membrane protein complex subunit 2 [Source:MGI Symbol;Acc:MGI:1913986]
65. Mcc ENSMUSG00000071856 4024 0.83 - 0.830 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
66. Cetn4 ENSMUSG00000045031 377 0.83 - 0.830 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
67. Klhl6 ENSMUSG00000043008 952 0.829 - 0.829 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
68. Gmds ENSMUSG00000038372 653 0.829 - 0.829 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
69. Gm9790 ENSMUSG00000044330 390 0.828 - 0.828 - - - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
70. 2610035D17Rik ENSMUSG00000087259 651 0.828 - 0.828 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
71. Hist1h3c ENSMUSG00000069310 508 0.828 - 0.828 - - - - histone cluster 1, H3c [Source:MGI Symbol;Acc:MGI:2448320]
72. Bckdha ENSMUSG00000060376 653 0.827 - 0.827 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
73. Hsdl2 ENSMUSG00000028383 1294 0.827 - 0.827 - - - - hydroxysteroid dehydrogenase like 2 [Source:MGI Symbol;Acc:MGI:1919729]
74. Zfp71-rs1 Zfp71-rs1 629 0.827 - 0.827 - - - -
75. Aldh6a1 ENSMUSG00000021238 522 0.827 - 0.827 - - - - aldehyde dehydrogenase family 6, subfamily A1 [Source:MGI Symbol;Acc:MGI:1915077]
76. S100a16 ENSMUSG00000074457 1007 0.827 - 0.827 - - - - S100 calcium binding protein A16 [Source:MGI Symbol;Acc:MGI:1915110]
77. Tnfrsf1a ENSMUSG00000030341 711 0.827 - 0.827 - - - - tumor necrosis factor receptor superfamily, member 1a [Source:MGI Symbol;Acc:MGI:1314884]
78. Ndufb4 ENSMUSG00000022820 1605 0.826 - 0.826 - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:MGI Symbol;Acc:MGI:1915444]
79. Gm10713 Gm10713 1480 0.826 - 0.826 - - - -
80. Wdr74 ENSMUSG00000042729 669 0.825 - 0.825 - - - - WD repeat domain 74 [Source:MGI Symbol;Acc:MGI:2147427]
81. Cep192 ENSMUSG00000024542 1349 0.825 - 0.825 - - - - centrosomal protein 192 [Source:MGI Symbol;Acc:MGI:1918049]
82. Gm26981 ENSMUSG00000098041 717 0.825 - 0.825 - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
83. Atg3 ENSMUSG00000022663 1323 0.825 - 0.825 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
84. Cops8 ENSMUSG00000034432 3968 0.825 - 0.825 - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
85. Slc38a3 ENSMUSG00000010064 147 0.825 - 0.825 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
86. Cxxc4 ENSMUSG00000044365 723 0.825 - 0.825 - - - - CXXC finger 4 [Source:MGI Symbol;Acc:MGI:2442112]
87. Frk ENSMUSG00000019779 639 0.825 - 0.825 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
88. Coa6 ENSMUSG00000051671 731 0.824 - 0.824 - - - - cytochrome c oxidase assembly factor 6 [Source:MGI Symbol;Acc:MGI:1915142]
89. Smim4 ENSMUSG00000058351 454 0.824 - 0.824 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
90. Smpd3 ENSMUSG00000031906 194 0.824 - 0.824 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
91. Dhx34 ENSMUSG00000006019 240 0.824 - 0.824 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
92. Kcnk5 ENSMUSG00000023243 191 0.824 - 0.824 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
93. Ptges3l ENSMUSG00000097487 146 0.824 - 0.824 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
94. Ppp4r4 ENSMUSG00000021209 242 0.823 - 0.823 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
95. Tmem135 ENSMUSG00000039428 946 0.823 - 0.823 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
96. Syne4 ENSMUSG00000019737 724 0.823 - 0.823 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
97. Tmem126b ENSMUSG00000030614 743 0.823 - 0.823 - - - - transmembrane protein 126B [Source:MGI Symbol;Acc:MGI:1915722]
98. Csrp2bp 1398 0.823 - 0.823 - - - - cysteine and glycine-rich protein 2 binding protein, transcript variant 1
99. Mrps7 ENSMUSG00000046756 2434 0.822 - 0.822 - - - - mitchondrial ribosomal protein S7 [Source:MGI Symbol;Acc:MGI:1354367]
100. Sik2 ENSMUSG00000037112 1369 0.822 - 0.822 - - - - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]

There are 236 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA