Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Smc4

Gene Name Gene ID Reads Annotation
Smc4 ENSMUSG00000034349 7290 structural maintenance of chromosomes 4 [Source:MGI Symbol;Acc:MGI:1917349]







Genes with expression patterns similar to Smc4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smc4 ENSMUSG00000034349 7290 6 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 4 [Source:MGI Symbol;Acc:MGI:1917349]
2. S100pbp ENSMUSG00000040928 2481 1.599 0.734 0.865 - - - - S100P binding protein [Source:MGI Symbol;Acc:MGI:1921898]
3. Fbxo30 ENSMUSG00000047648 1917 0.878 - - 0.878 - - - F-box protein 30 [Source:MGI Symbol;Acc:MGI:1919115]
4. Cdc20 ENSMUSG00000006398 2833 0.865 - 0.865 - - - - cell division cycle 20 [Source:MGI Symbol;Acc:MGI:1859866]
5. Atrx ENSMUSG00000031229 13717 0.864 0.864 - - - - - ATRX, chromatin remodeler [Source:MGI Symbol;Acc:MGI:103067]
6. C2cd3 ENSMUSG00000047248 1181 0.859 - 0.859 - - - - C2 calcium-dependent domain containing 3 [Source:MGI Symbol;Acc:MGI:2142166]
7. Lig3 ENSMUSG00000020697 1227 0.855 - 0.855 - - - - ligase III, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:109152]
8. Wdr36 ENSMUSG00000038299 2000 0.851 - 0.851 - - - - WD repeat domain 36 [Source:MGI Symbol;Acc:MGI:1917819]
9. Ercc6l2 ENSMUSG00000021470 1300 0.848 - 0.848 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 [Source:MGI Symbol;Acc:MGI:1923501]
10. Cflar ENSMUSG00000026031 1594 0.84 - 0.840 - - - - CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
11. Zfp617 ENSMUSG00000066880 2412 0.838 - 0.838 - - - - zinc finger protein 617 [Source:MGI Symbol;Acc:MGI:2684459]
12. Cenpe ENSMUSG00000045328 4221 0.837 - 0.837 - - - - centromere protein E [Source:MGI Symbol;Acc:MGI:1098230]
13. Htatsf1 ENSMUSG00000067873 3155 0.836 - 0.836 - - - - HIV TAT specific factor 1 [Source:MGI Symbol;Acc:MGI:1919709]
14. Bace1 ENSMUSG00000032086 1360 0.829 - 0.829 - - - - beta-site APP cleaving enzyme 1 [Source:MGI Symbol;Acc:MGI:1346542]
15. Setd5 ENSMUSG00000034269 3438 0.821 0.821 - - - - - SET domain containing 5 [Source:MGI Symbol;Acc:MGI:1920145]
16. Ctnnbip1 ENSMUSG00000028988 3409 0.821 - 0.821 - - - - catenin beta interacting protein 1 [Source:MGI Symbol;Acc:MGI:1915756]
17. Wdfy1 ENSMUSG00000073643 3020 0.82 - 0.820 - - - - WD repeat and FYVE domain containing 1 [Source:MGI Symbol;Acc:MGI:1916618]
18. Psma4 ENSMUSG00000032301 10121 0.82 0.820 - - - - - proteasome (prosome, macropain) subunit, alpha type 4 [Source:MGI Symbol;Acc:MGI:1347060]
19. Mrps26 ENSMUSG00000037740 1834 0.82 - 0.820 - - - - mitochondrial ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1333830]
20. Armc1 ENSMUSG00000027599 6408 0.818 - 0.818 - - - - armadillo repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921502]
21. Acp1 ENSMUSG00000044573 11029 0.818 0.818 - - - - - acid phosphatase 1, soluble [Source:MGI Symbol;Acc:MGI:87881]
22. Eci1 ENSMUSG00000024132 1403 0.816 - 0.816 - - - - enoyl-Coenzyme A delta isomerase 1 [Source:MGI Symbol;Acc:MGI:94871]
23. Hars ENSMUSG00000001380 2241 0.809 - 0.809 - - - - histidyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:108087]
24. Atp6v0e ENSMUSG00000015575 2494 0.808 - 0.808 - - - - ATPase, H+ transporting, lysosomal V0 subunit E [Source:MGI Symbol;Acc:MGI:1328318]
25. Nup153 ENSMUSG00000021374 1803 0.807 - 0.807 - - - - nucleoporin 153 [Source:MGI Symbol;Acc:MGI:2385621]
26. Utp3 ENSMUSG00000070697 4067 0.807 - 0.807 - - - - UTP3 small subunit processome component [Source:MGI Symbol;Acc:MGI:1919230]
27. Fundc2 ENSMUSG00000031198 5130 0.805 0.805 - - - - - FUN14 domain containing 2 [Source:MGI Symbol;Acc:MGI:1914641]
28. Casc5 2082 0.799 - - 0.799 - - - cancer susceptibility candidate 5, transcript variant X2
29. Spop ENSMUSG00000057522 1819 0.799 - 0.799 - - - - speckle-type POZ protein [Source:MGI Symbol;Acc:MGI:1343085]
30. Nr4a2 ENSMUSG00000026826 594 0.796 - 0.796 - - - - nuclear receptor subfamily 4, group A, member 2 [Source:MGI Symbol;Acc:MGI:1352456]
31. Adar ENSMUSG00000027951 1612 0.791 - 0.791 - - - - adenosine deaminase, RNA-specific [Source:MGI Symbol;Acc:MGI:1889575]
32. Gm10110 ENSMUSG00000062093 706 0.785 - 0.785 - - - - predicted gene 10110 [Source:MGI Symbol;Acc:MGI:3641718]
33. Cdc37 ENSMUSG00000019471 6483 0.784 - 0.784 - - - - cell division cycle 37 [Source:MGI Symbol;Acc:MGI:109531]
34. Sgol1 1886 0.779 - 0.779 - - - - shugoshin-like 1 (S. pombe), transcript variant X2
35. Scamp3 ENSMUSG00000028049 1569 0.777 - 0.777 - - - - secretory carrier membrane protein 3 [Source:MGI Symbol;Acc:MGI:1346346]
36. Clip3 ENSMUSG00000013921 4769 0.777 - 0.777 - - - - CAP-GLY domain containing linker protein 3 [Source:MGI Symbol;Acc:MGI:1923936]
37. Ppfia1 ENSMUSG00000037519 3319 0.776 - 0.776 - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:MGI Symbol;Acc:MGI:1924750]
38. Scube3 ENSMUSG00000038677 1059 0.774 - 0.774 - - - - signal peptide, CUB domain, EGF-like 3 [Source:MGI Symbol;Acc:MGI:3045253]
39. Actr3 ENSMUSG00000026341 4146 0.773 - 0.773 - - - - ARP3 actin-related protein 3 [Source:MGI Symbol;Acc:MGI:1921367]
40. Tcf20 ENSMUSG00000041852 761 0.773 - 0.773 - - - - transcription factor 20 [Source:MGI Symbol;Acc:MGI:108399]
41. Rock1 ENSMUSG00000024290 4094 0.77 - - 0.770 - - - Rho-associated coiled-coil containing protein kinase 1 [Source:MGI Symbol;Acc:MGI:107927]
42. Zmynd19 ENSMUSG00000026974 1400 0.77 - 0.770 - - - - zinc finger, MYND domain containing 19 [Source:MGI Symbol;Acc:MGI:1914437]
43. Uqcrb ENSMUSG00000021520 3934 0.77 0.770 - - - - - ubiquinol-cytochrome c reductase binding protein [Source:MGI Symbol;Acc:MGI:1914780]
44. Bclaf1 ENSMUSG00000037608 8711 0.769 0.769 - - - - - BCL2-associated transcription factor 1 [Source:MGI Symbol;Acc:MGI:1917580]
45. Ddx3x ENSMUSG00000000787 27968 0.768 - - 0.768 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
46. Lphn2 Lphn2 6084 0.768 0.768 - - - - -
47. Foxm1 ENSMUSG00000001517 1628 0.768 - 0.768 - - - - forkhead box M1 [Source:MGI Symbol;Acc:MGI:1347487]
48. Ubox5 ENSMUSG00000027300 434 0.768 - 0.768 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
49. Nme4 ENSMUSG00000024177 6834 0.766 0.766 - - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:MGI Symbol;Acc:MGI:1931148]
50. Zfp609 ENSMUSG00000040524 1316 0.765 - 0.765 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
51. Prpf40a ENSMUSG00000061136 8476 0.764 - - 0.764 - - - pre-mRNA processing factor 40A [Source:MGI Symbol;Acc:MGI:1860512]
52. Lrrc17 ENSMUSG00000039883 11592 0.764 - - 0.764 - - - leucine rich repeat containing 17 [Source:MGI Symbol;Acc:MGI:1921761]
53. Dido1 ENSMUSG00000038914 1891 0.763 - 0.763 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
54. Fam102b ENSMUSG00000040339 1195 0.763 - 0.763 - - - - family with sequence similarity 102, member B [Source:MGI Symbol;Acc:MGI:3036259]
55. Kras ENSMUSG00000030265 3040 0.763 - 0.763 - - - - Kirsten rat sarcoma viral oncogene homolog [Source:MGI Symbol;Acc:MGI:96680]
56. Galc ENSMUSG00000021003 662 0.762 - 0.762 - - - - galactosylceramidase [Source:MGI Symbol;Acc:MGI:95636]
57. Mib1 ENSMUSG00000024294 3226 0.761 - 0.761 - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2443157]
58. Tapt1 ENSMUSG00000046985 1206 0.761 - 0.761 - - - - transmembrane anterior posterior transformation 1 [Source:MGI Symbol;Acc:MGI:2683537]
59. Zfr ENSMUSG00000022201 9919 0.761 - 0.761 - - - - zinc finger RNA binding protein [Source:MGI Symbol;Acc:MGI:1341890]
60. Terf2 ENSMUSG00000031921 4298 0.76 0.760 - - - - - telomeric repeat binding factor 2 [Source:MGI Symbol;Acc:MGI:1195972]
61. Ebf2 ENSMUSG00000022053 834 0.76 - 0.760 - - - - early B cell factor 2 [Source:MGI Symbol;Acc:MGI:894332]
62. Saal1 ENSMUSG00000006763 2057 0.76 - 0.760 - - - - serum amyloid A-like 1 [Source:MGI Symbol;Acc:MGI:1926185]
63. Itfg2 ENSMUSG00000001518 1233 0.759 - 0.759 - - - - integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]
64. Zswim7 ENSMUSG00000014243 799 0.757 - 0.757 - - - - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
65. Dzank1 ENSMUSG00000037259 518 0.757 - 0.757 - - - - double zinc ribbon and ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:2139080]
66. Mef2c ENSMUSG00000005583 2710 0.757 - 0.757 - - - - myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458]
67. Ss18 ENSMUSG00000037013 2742 0.757 - 0.757 - - - - SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]
68. Nop16 ENSMUSG00000025869 1347 0.756 - 0.756 - - - - NOP16 nucleolar protein [Source:MGI Symbol;Acc:MGI:107862]
69. Emd ENSMUSG00000001964 3076 0.756 - 0.756 - - - - emerin [Source:MGI Symbol;Acc:MGI:108117]
70. Rnf167 ENSMUSG00000040746 1958 0.756 - 0.756 - - - - ring finger protein 167 [Source:MGI Symbol;Acc:MGI:1917760]
71. Crcp ENSMUSG00000025532 699 0.754 - 0.754 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
72. Prcc ENSMUSG00000004895 527 0.754 - 0.754 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
73. Gabarap ENSMUSG00000018567 7347 0.753 0.753 - - - - - gamma-aminobutyric acid receptor associated protein [Source:MGI Symbol;Acc:MGI:1861742]
74. Sugp2 ENSMUSG00000036054 1239 0.753 - 0.753 - - - - SURP and G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:2678085]
75. Ppp1r15b ENSMUSG00000046062 1778 0.752 - 0.752 - - - - protein phosphatase 1, regulatory subunit 15B [Source:MGI Symbol;Acc:MGI:2444211]
76. Ntan1 ENSMUSG00000022681 1812 0.752 - 0.752 - - - - N-terminal Asn amidase [Source:MGI Symbol;Acc:MGI:108471]
77. Pank1 ENSMUSG00000033610 1083 0.752 - 0.752 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
78. Chfr ENSMUSG00000014668 1287 0.752 - 0.752 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
79. Calu ENSMUSG00000029767 4381 0.752 - 0.752 - - - - calumenin [Source:MGI Symbol;Acc:MGI:1097158]
80. Sec11c ENSMUSG00000024516 640 0.751 - 0.751 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
81. Exog ENSMUSG00000042787 1392 0.751 - 0.751 - - - - endo/exonuclease (5'-3'), endonuclease G-like [Source:MGI Symbol;Acc:MGI:2143333]
82. Fam122a ENSMUSG00000074922 1806 0.751 - 0.751 - - - - family with sequence similarity 122, member A [Source:MGI Symbol;Acc:MGI:1915284]
83. 4632434I11Rik 4632434I11Rik 951 0.75 - 0.750 - - - -
84. Cdc14a ENSMUSG00000033502 731 0.749 - 0.749 - - - - CDC14 cell division cycle 14A [Source:MGI Symbol;Acc:MGI:2442676]
85. Phyh ENSMUSG00000026664 659 0.749 - 0.749 - - - - phytanoyl-CoA hydroxylase [Source:MGI Symbol;Acc:MGI:891978]
86. Dpm3 ENSMUSG00000042737 1272 0.748 - 0.748 - - - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:MGI Symbol;Acc:MGI:1915813]
87. Tbx5 ENSMUSG00000018263 655 0.748 - 0.748 - - - - T-box 5 [Source:MGI Symbol;Acc:MGI:102541]
88. Mns1 ENSMUSG00000032221 1295 0.748 - 0.748 - - - - meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933]
89. E130307A14Rik ENSMUSG00000087177 1348 0.748 - 0.748 - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
90. AW209491 ENSMUSG00000039182 618 0.747 - 0.747 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
91. Mga ENSMUSG00000033943 2792 0.746 - 0.746 - - - - MAX gene associated [Source:MGI Symbol;Acc:MGI:1352483]
92. Tgfbrap1 ENSMUSG00000070939 1413 0.745 - 0.745 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
93. Vps9d1 ENSMUSG00000001062 694 0.745 - 0.745 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
94. Eif3h ENSMUSG00000022312 7829 0.744 - 0.744 - - - - eukaryotic translation initiation factor 3, subunit H [Source:MGI Symbol;Acc:MGI:1915385]
95. Evi5l ENSMUSG00000011832 691 0.744 - 0.744 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
96. Gm12005 ENSMUSG00000081631 601 0.744 - 0.744 - - - - predicted gene 12005 [Source:MGI Symbol;Acc:MGI:3651316]
97. Ube2e2 ENSMUSG00000058317 729 0.744 - 0.744 - - - - ubiquitin-conjugating enzyme E2E 2 [Source:MGI Symbol;Acc:MGI:2384997]
98. Usp2 ENSMUSG00000032010 525 0.744 - 0.744 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
99. Zfp444 ENSMUSG00000044876 1576 0.744 - 0.744 - - - - zinc finger protein 444 [Source:MGI Symbol;Acc:MGI:1923365]
100. Gm26822 ENSMUSG00000096921 421 0.743 - 0.743 - - - - predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]

There are 173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA