Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Slit3

Gene Name Gene ID Reads Annotation
Slit3 ENSMUSG00000056427 426 slit guidance ligand 3 [Source:MGI Symbol;Acc:MGI:1315202]







Genes with expression patterns similar to Slit3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Slit3 ENSMUSG00000056427 426 6 1.000 1.000 1.000 1.000 1.000 1.000 slit guidance ligand 3 [Source:MGI Symbol;Acc:MGI:1315202]
2. Ak5 ENSMUSG00000039058 89 1.592 - - 0.807 - - 0.785 adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]
3. Gm15396 ENSMUSG00000109491 112 1.533 - - - 0.743 - 0.790 predicted gene 15396 [Source:MGI Symbol;Acc:MGI:3705202]
4. Entpd1 ENSMUSG00000048120 159 1.497 - - - 0.735 - 0.762 ectonucleoside triphosphate diphosphohydrolase 1 [Source:MGI Symbol;Acc:MGI:102805]
5. Depdc1b ENSMUSG00000021697 283 0.939 - 0.939 - - - - DEP domain containing 1B [Source:MGI Symbol;Acc:MGI:2145425]
6. Gla ENSMUSG00000031266 230 0.928 - 0.928 - - - - galactosidase, alpha [Source:MGI Symbol;Acc:MGI:1347344]
7. Fxr1 ENSMUSG00000027680 2134 0.91 - 0.910 - - - - fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860]
8. Napepld ENSMUSG00000044968 544 0.909 - 0.909 - - - - N-acyl phosphatidylethanolamine phospholipase D [Source:MGI Symbol;Acc:MGI:2140885]
9. Ikzf2 ENSMUSG00000025997 496 0.906 - 0.906 - - - - IKAROS family zinc finger 2 [Source:MGI Symbol;Acc:MGI:1342541]
10. Vps52 ENSMUSG00000024319 1049 0.905 - 0.905 - - - - VPS52 GARP complex subunit [Source:MGI Symbol;Acc:MGI:1330304]
11. Tlcd2 ENSMUSG00000038217 865 0.902 - 0.902 - - - - TLC domain containing 2 [Source:MGI Symbol;Acc:MGI:1917141]
12. Ciao1 ENSMUSG00000003662 513 0.896 - 0.896 - - - - cytosolic iron-sulfur protein assembly 1 [Source:MGI Symbol;Acc:MGI:1346998]
13. Gtf2ird2 ENSMUSG00000015942 506 0.895 - 0.895 - - - - GTF2I repeat domain containing 2 [Source:MGI Symbol;Acc:MGI:2149780]
14. Chic1 ENSMUSG00000031327 734 0.893 - 0.893 - - - - cysteine-rich hydrophobic domain 1 [Source:MGI Symbol;Acc:MGI:1344694]
15. Saa2 ENSMUSG00000057465 72 0.892 - - 0.892 - - - serum amyloid A 2 [Source:MGI Symbol;Acc:MGI:98222]
16. 4930402H24Rik ENSMUSG00000027309 2029 0.888 - 0.888 - - - - RIKEN cDNA 4930402H24 gene [Source:MGI Symbol;Acc:MGI:1923029]
17. Pagr1a ENSMUSG00000030680 661 0.887 - 0.887 - - - - PAXIP1 associated glutamate rich protein 1A [Source:MGI Symbol;Acc:MGI:1914528]
18. Tsr2 ENSMUSG00000025264 1165 0.885 - 0.885 - - - - TSR2 20S rRNA accumulation [Source:MGI Symbol;Acc:MGI:1916749]
19. Sumf1 ENSMUSG00000030101 541 0.881 - 0.881 - - - - sulfatase modifying factor 1 [Source:MGI Symbol;Acc:MGI:1889844]
20. Tada3 ENSMUSG00000048930 1021 0.876 - 0.876 - - - - transcriptional adaptor 3 [Source:MGI Symbol;Acc:MGI:1915724]
21. Atp5s ENSMUSG00000054894 328 0.869 - - 0.869 - - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S [Source:MGI Symbol;Acc:MGI:1915305]
22. Cdipt ENSMUSG00000030682 1360 0.863 - 0.863 - - - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:MGI Symbol;Acc:MGI:105491]
23. Chmp6 ENSMUSG00000025371 1369 0.855 - 0.855 - - - - charged multivesicular body protein 6 [Source:MGI Symbol;Acc:MGI:3583942]
24. Phkg2 ENSMUSG00000030815 894 0.855 - 0.855 - - - - phosphorylase kinase, gamma 2 (testis) [Source:MGI Symbol;Acc:MGI:1916211]
25. D130062J21Rik D130062J21Rik 693 0.854 - 0.854 - - - -
26. Abcc9 ENSMUSG00000030249 487 0.851 - - 0.851 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:MGI Symbol;Acc:MGI:1352630]
27. Tmem64 ENSMUSG00000043252 1291 0.851 - 0.851 - - - - transmembrane protein 64 [Source:MGI Symbol;Acc:MGI:2140359]
28. Pcid2 ENSMUSG00000038542 1160 0.848 - 0.848 - - - - PCI domain containing 2 [Source:MGI Symbol;Acc:MGI:2443003]
29. Relb ENSMUSG00000002983 1128 0.847 - 0.847 - - - - avian reticuloendotheliosis viral (v-rel) oncogene related B [Source:MGI Symbol;Acc:MGI:103289]
30. Plscr1 ENSMUSG00000032369 359 0.845 - - 0.845 - - - phospholipid scramblase 1 [Source:MGI Symbol;Acc:MGI:893575]
31. BC027582 BC027582 61 0.843 - 0.843 - - - -
32. Gbe1 ENSMUSG00000022707 940 0.842 - 0.842 - - - - glucan (1,4-alpha-), branching enzyme 1 [Source:MGI Symbol;Acc:MGI:1921435]
33. Wrnip1 ENSMUSG00000021400 1189 0.842 - 0.842 - - - - Werner helicase interacting protein 1 [Source:MGI Symbol;Acc:MGI:1926153]
34. Eef1a2 ENSMUSG00000016349 41 0.841 - 0.841 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:MGI Symbol;Acc:MGI:1096317]
35. Celf3 ENSMUSG00000028137 141 0.84 - 0.840 - - - - CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]
36. Gm13033 ENSMUSG00000083816 71 0.84 - 0.840 - - - - predicted gene 13033 [Source:MGI Symbol;Acc:MGI:3649305]
37. Gm14227 ENSMUSG00000082596 93 0.84 - 0.840 - - - - predicted gene 14227 [Source:MGI Symbol;Acc:MGI:3649437]
38. Ctla2b ENSMUSG00000074874 66 0.839 - 0.839 - - - - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
39. Gm15954 Gm15954 49 0.839 - 0.839 - - - -
40. Gm26869 ENSMUSG00000097879 104 0.839 - 0.839 - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
41. Snora23 ENSMUSG00000064451 53 0.839 - 0.839 - - - - small nucleolar RNA, H/ACA box 23 [Source:MGI Symbol;Acc:MGI:3819494]
42. Comtd1 ENSMUSG00000021773 175 0.838 - - 0.838 - - - catechol-O-methyltransferase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916406]
43. Yipf6 ENSMUSG00000047694 1128 0.838 - 0.838 - - - - Yip1 domain family, member 6 [Source:MGI Symbol;Acc:MGI:1925179]
44. Stc2 ENSMUSG00000020303 138 0.837 - 0.837 - - - - stanniocalcin 2 [Source:MGI Symbol;Acc:MGI:1316731]
45. Ctif ENSMUSG00000052928 995 0.834 - 0.834 - - - - CBP80/20-dependent translation initiation factor [Source:MGI Symbol;Acc:MGI:2685518]
46. Ercc6 ENSMUSG00000054051 674 0.834 - 0.834 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:MGI Symbol;Acc:MGI:1100494]
47. Ccbl1 Ccbl1 330 0.833 - 0.833 - - - -
48. Ndel1 ENSMUSG00000018736 3400 0.833 - 0.833 - - - - nudE neurodevelopment protein 1 like 1 [Source:MGI Symbol;Acc:MGI:1932915]
49. Thsd1 ENSMUSG00000031480 416 0.833 - 0.833 - - - - thrombospondin, type I, domain 1 [Source:MGI Symbol;Acc:MGI:1929096]
50. Tmsb15b1 ENSMUSG00000089768 199 0.833 - 0.833 - - - - thymosin beta 15b1 [Source:MGI Symbol;Acc:MGI:3843059]
51. Stim1 ENSMUSG00000030987 220 0.832 - 0.832 - - - - stromal interaction molecule 1 [Source:MGI Symbol;Acc:MGI:107476]
52. Sigmar1 ENSMUSG00000036078 1307 0.83 - 0.830 - - - - sigma non-opioid intracellular receptor 1 [Source:MGI Symbol;Acc:MGI:1195268]
53. Ninj1 ENSMUSG00000037966 493 0.829 - 0.829 - - - - ninjurin 1 [Source:MGI Symbol;Acc:MGI:1196617]
54. A230004M16Rik ENSMUSG00000087306 117 0.829 - - - 0.829 - - RIKEN cDNA A230004M16 gene [Source:MGI Symbol;Acc:MGI:2445050]
55. Zfp551 ENSMUSG00000034071 101 0.827 - 0.827 - - - - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
56. Ccr5 ENSMUSG00000079227 87 0.827 - 0.827 - - - - chemokine (C-C motif) receptor 5 [Source:MGI Symbol;Acc:MGI:107182]
57. Elovl4 ENSMUSG00000032262 290 0.827 - - - - - 0.827 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 [Source:MGI Symbol;Acc:MGI:1933331]
58. Rep15 ENSMUSG00000040121 131 0.827 - 0.827 - - - - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
59. Cgrrf1 ENSMUSG00000055128 994 0.826 - 0.826 - - - - cell growth regulator with ring finger domain 1 [Source:MGI Symbol;Acc:MGI:1916368]
60. Pls1 ENSMUSG00000049493 175 0.826 - 0.826 - - - - plastin 1 (I-isoform) [Source:MGI Symbol;Acc:MGI:104809]
61. Mcmdc2 ENSMUSG00000046101 117 0.826 - 0.826 - - - - minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]
62. Mettl7a3 ENSMUSG00000058057 214 0.824 - 0.824 - - - - methyltransferase like 7A3 [Source:MGI Symbol;Acc:MGI:3710670]
63. Pld1 ENSMUSG00000027695 229 0.822 - 0.822 - - - - phospholipase D1 [Source:MGI Symbol;Acc:MGI:109585]
64. 5033428I22Rik ENSMUSG00000097910 203 0.82 - - - - - 0.820 RIKEN cDNA 5033428I22 gene [Source:MGI Symbol;Acc:MGI:1923246]
65. Wwc1 ENSMUSG00000018849 410 0.819 - 0.819 - - - - WW, C2 and coiled-coil domain containing 1 [Source:MGI Symbol;Acc:MGI:2388637]
66. Igsf10 ENSMUSG00000036334 133 0.818 - 0.818 - - - - immunoglobulin superfamily, member 10 [Source:MGI Symbol;Acc:MGI:1923481]
67. Gm6395 ENSMUSG00000091905 164 0.816 - - - - - 0.816 predicted gene 6395 [Source:MGI Symbol;Acc:MGI:3645295]
68. Mlycd ENSMUSG00000074064 268 0.814 - 0.814 - - - - malonyl-CoA decarboxylase [Source:MGI Symbol;Acc:MGI:1928485]
69. Zfp445 ENSMUSG00000047036 205 0.814 - 0.814 - - - - zinc finger protein 445 [Source:MGI Symbol;Acc:MGI:2143340]
70. Lad1 ENSMUSG00000041782 339 0.814 - 0.814 - - - - ladinin [Source:MGI Symbol;Acc:MGI:109343]
71. Golph3l ENSMUSG00000046519 687 0.814 - 0.814 - - - - golgi phosphoprotein 3-like [Source:MGI Symbol;Acc:MGI:1917129]
72. Arhgap6 ENSMUSG00000031355 260 0.813 - - - - - 0.813 Rho GTPase activating protein 6 [Source:MGI Symbol;Acc:MGI:1196332]
73. Tcaim ENSMUSG00000046603 178 0.813 - - 0.813 - - - T cell activation inhibitor, mitochondrial [Source:MGI Symbol;Acc:MGI:1196217]
74. Gm13422 ENSMUSG00000084098 313 0.813 - 0.813 - - - - predicted gene 13422 [Source:MGI Symbol;Acc:MGI:3650167]
75. Ank1 ENSMUSG00000031543 443 0.813 - 0.813 - - - - ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]
76. Emc1 ENSMUSG00000078517 293 0.812 - 0.812 - - - - ER membrane protein complex subunit 1 [Source:MGI Symbol;Acc:MGI:2443696]
77. Nfatc1 ENSMUSG00000033016 281 0.811 - - - - - 0.811 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 [Source:MGI Symbol;Acc:MGI:102469]
78. Trp53i13 ENSMUSG00000044328 168 0.811 - - - - - 0.811 transformation related protein 53 inducible protein 13 [Source:MGI Symbol;Acc:MGI:1915125]
79. Khnyn ENSMUSG00000047153 196 0.811 - 0.811 - - - - KH and NYN domain containing [Source:MGI Symbol;Acc:MGI:2451333]
80. Ficd ENSMUSG00000053334 130 0.809 - 0.809 - - - - FIC domain containing [Source:MGI Symbol;Acc:MGI:1098550]
81. Prss53 ENSMUSG00000044139 49 0.809 - - - - - 0.809 protease, serine 53 [Source:MGI Symbol;Acc:MGI:2652890]
82. Abhd5 ENSMUSG00000032540 461 0.808 - 0.808 - - - - abhydrolase domain containing 5 [Source:MGI Symbol;Acc:MGI:1914719]
83. Ndst2 ENSMUSG00000039308 402 0.807 - 0.807 - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 [Source:MGI Symbol;Acc:MGI:97040]
84. Leprotl1 ENSMUSG00000031513 1832 0.807 - 0.807 - - - - leptin receptor overlapping transcript-like 1 [Source:MGI Symbol;Acc:MGI:1915442]
85. Mtmr3 ENSMUSG00000034354 1240 0.807 - 0.807 - - - - myotubularin related protein 3 [Source:MGI Symbol;Acc:MGI:1921552]
86. Trip10 ENSMUSG00000019487 485 0.807 - 0.807 - - - - thyroid hormone receptor interactor 10 [Source:MGI Symbol;Acc:MGI:2146901]
87. 9230110C19Rik 238 0.807 - - 0.807 - - - RIKEN cDNA 9230110C19 gene, transcript variant X2
88. Il10rb ENSMUSG00000022969 176 0.806 - 0.806 - - - - interleukin 10 receptor, beta [Source:MGI Symbol;Acc:MGI:109380]
89. St3gal6 ENSMUSG00000022747 332 0.806 - 0.806 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:MGI Symbol;Acc:MGI:1888707]
90. Lgals9 ENSMUSG00000001123 214 0.806 - - - - - 0.806 lectin, galactose binding, soluble 9 [Source:MGI Symbol;Acc:MGI:109496]
91. Gm16287 ENSMUSG00000073739 273 0.805 - 0.805 - - - - predicted gene 16287 [Source:MGI Symbol;Acc:MGI:3650322]
92. Xrn1 ENSMUSG00000032410 667 0.805 - 0.805 - - - - 5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]
93. B9d2 ENSMUSG00000063439 1774 0.805 - - - 0.805 - - B9 protein domain 2 [Source:MGI Symbol;Acc:MGI:2387643]
94. Gm11539 ENSMUSG00000083337 746 0.804 - 0.804 - - - - predicted gene 11539 [Source:MGI Symbol;Acc:MGI:3651911]
95. Kri1 ENSMUSG00000035047 116 0.804 - - - - - 0.804 KRI1 homolog [Source:MGI Symbol;Acc:MGI:2384899]
96. Adamts18 ENSMUSG00000053399 481 0.803 - - - - - 0.803 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 [Source:MGI Symbol;Acc:MGI:2442600]
97. Ap5m1 ENSMUSG00000036291 380 0.802 - - 0.802 - - - adaptor-related protein complex 5, mu 1 subunit [Source:MGI Symbol;Acc:MGI:1921635]
98. Hexdc ENSMUSG00000039307 420 0.801 - 0.801 - - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:MGI Symbol;Acc:MGI:3605542]
99. Zfp493 ENSMUSG00000090659 91 0.801 - - - - - 0.801 zinc finger protein 493 [Source:MGI Symbol;Acc:MGI:1920208]
100. Pitpnc1 ENSMUSG00000040430 4748 0.8 - 0.800 - - - - phosphatidylinositol transfer protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1919045]

There are 353 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA