Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Slc6a1

Gene Name Gene ID Reads Annotation
Slc6a1 ENSMUSG00000030310 22 solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:MGI Symbol;Acc:MGI:95627]







Genes with expression patterns similar to Slc6a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Slc6a1 ENSMUSG00000030310 22 5 - 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:MGI Symbol;Acc:MGI:95627]
2. Scn3b ENSMUSG00000049281 88 1.611 - 0.840 - 0.771 - - sodium channel, voltage-gated, type III, beta [Source:MGI Symbol;Acc:MGI:1918882]
3. Snhg11 ENSMUSG00000044349 1353 1.49 - - - 0.753 0.737 - small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]
4. Scg2 ENSMUSG00000050711 91 1.466 - - - 0.760 - 0.706 secretogranin II [Source:MGI Symbol;Acc:MGI:103033]
5. Gm26024 ENSMUSG00000089282 23 1.466 - 0.740 0.726 - - - predicted gene, 26024 [Source:MGI Symbol;Acc:MGI:5455801]
6. Sncg ENSMUSG00000023064 1702 1.454 - - - 0.703 0.751 - synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
7. Htr1a ENSMUSG00000021721 2 1 - 1.000 - - - - 5-hydroxytryptamine (serotonin) receptor 1A [Source:MGI Symbol;Acc:MGI:96273]
8. 2610044O15Rik8 ENSMUSG00000071302 3 1 - 1.000 - - - - RIKEN cDNA 2610044O15 gene [Source:MGI Symbol;Acc:MGI:1919389]
9. C230029F24Rik ENSMUSG00000051616 132 1 - 1.000 - - - - RIKEN cDNA C230029F24 gene [Source:MGI Symbol;Acc:MGI:3045370]
10. Gm12511 ENSMUSG00000066176 2 1 - 1.000 - - - - predicted gene 12511 [Source:MGI Symbol;Acc:MGI:3651363]
11. Gm6155 ENSMUSG00000068629 16 1 - 1.000 - - - - predicted pseudogene 6155 [Source:MGI Symbol;Acc:MGI:3643981]
12. Lrriq3 ENSMUSG00000028182 5 1 - 1.000 - - - - leucine-rich repeats and IQ motif containing 3 [Source:MGI Symbol;Acc:MGI:1921685]
13. Itgbl1 ENSMUSG00000032925 2 1 - 1.000 - - - - integrin, beta-like 1 [Source:MGI Symbol;Acc:MGI:2443439]
14. Ifi203 ENSMUSG00000039997 17 1 - 1.000 - - - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
15. Fbxo40 ENSMUSG00000047746 2 1 - 1.000 - - - - F-box protein 40 [Source:MGI Symbol;Acc:MGI:2443753]
16. RP23-131O4.2 RP23-131O4.2 1 1 - 1.000 - - - -
17. Gm13775 ENSMUSG00000081207 54 1 - 1.000 - - - - predicted gene 13775 [Source:MGI Symbol;Acc:MGI:3712466]
18. Zc3h12d ENSMUSG00000039981 1 1 - 1.000 - - - - zinc finger CCCH type containing 12D [Source:MGI Symbol;Acc:MGI:3045313]
19. Gm11269 ENSMUSG00000086293 1 1 - 1.000 - - - - predicted gene 11269 [Source:MGI Symbol;Acc:MGI:3649855]
20. Hmgb1-ps6 ENSMUSG00000080928 263 1 - 1.000 - - - - high mobility group box 1, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3776507]
21. Gm26355 ENSMUSG00000088845 5 1 - 1.000 - - - - predicted gene, 26355 [Source:MGI Symbol;Acc:MGI:5456132]
22. Rpl21-ps3 ENSMUSG00000060566 7 1 - 1.000 - - - - ribosomal protein L21, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3646431]
23. Gm12762 ENSMUSG00000086526 3 1 - 1.000 - - - - predicted gene 12762 [Source:MGI Symbol;Acc:MGI:3649976]
24. Cyb5r2 ENSMUSG00000048065 10 1 - 1.000 - - - - cytochrome b5 reductase 2 [Source:MGI Symbol;Acc:MGI:2444415]
25. Slc9b1 ENSMUSG00000050150 6 1 - 1.000 - - - - solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 [Source:MGI Symbol;Acc:MGI:1921696]
26. Gm10655 ENSMUSG00000074256 4 1 - 1.000 - - - - predicted gene 10655 [Source:MGI Symbol;Acc:MGI:3642575]
27. Gm13675 ENSMUSG00000080979 8 1 - 1.000 - - - - predicted gene 13675 [Source:MGI Symbol;Acc:MGI:3649532]
28. Psmb8 ENSMUSG00000024338 16 1 - 1.000 - - - - proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) [Source:MGI Symbol;Acc:MGI:1346527]
29. 9230105E05Rik ENSMUSG00000090191 5 1 - 1.000 - - - - RIKEN cDNA 9230105E05 gene [Source:MGI Symbol;Acc:MGI:2444388]
30. Trpv3 ENSMUSG00000043029 4 1 - 1.000 - - - - transient receptor potential cation channel, subfamily V, member 3 [Source:MGI Symbol;Acc:MGI:2181407]
31. Gm9839 ENSMUSG00000102865 1 1 - 1.000 - - - - predicted gene 9839 [Source:MGI Symbol;Acc:MGI:3641910]
32. Usp44 ENSMUSG00000020020 12 1 - 1.000 - - - - ubiquitin specific peptidase 44 [Source:MGI Symbol;Acc:MGI:3045318]
33. Abca16 ENSMUSG00000051900 3 1 - 1.000 - - - - ATP-binding cassette, sub-family A (ABC1), member 16 [Source:MGI Symbol;Acc:MGI:2388711]
34. Gm15915 ENSMUSG00000085723 101 1 - 1.000 - - - - predicted gene 15915 [Source:MGI Symbol;Acc:MGI:3801763]
35. Gm7361 ENSMUSG00000059645 1 1 - 1.000 - - - - predicted gene 7361 [Source:MGI Symbol;Acc:MGI:3805965]
36. Try5 ENSMUSG00000036938 3 1 - 1.000 - - - - trypsin 5 [Source:MGI Symbol;Acc:MGI:102756]
37. Gm15577 ENSMUSG00000086708 2 1 - 1.000 - - - - predicted gene 15577 [Source:MGI Symbol;Acc:MGI:3783025]
38. Tex37 ENSMUSG00000051896 1 1 - 1.000 - - - - testis expressed 37 [Source:MGI Symbol;Acc:MGI:1921471]
39. 4930544L04Rik ENSMUSG00000073803 4 1 - 1.000 - - - - RIKEN cDNA 4930544L04 gene [Source:MGI Symbol;Acc:MGI:1926057]
40. BC006965 ENSMUSG00000041674 5 1 - 1.000 - - - - cDNA sequence BC006965 [Source:MGI Symbol;Acc:MGI:2384955]
41. Nkx2-9 ENSMUSG00000058669 17 0.982 - 0.982 - - - - NK2 homeobox 9 [Source:MGI Symbol;Acc:MGI:1270158]
42. Cabp7 ENSMUSG00000009075 20 0.937 - - 0.937 - - - calcium binding protein 7 [Source:MGI Symbol;Acc:MGI:2183437]
43. 2610207O16Rik 2610207O16Rik 1 0.937 - - 0.937 - - -
44. C630020P19Rik C630020P19Rik 34 0.935 - - 0.935 - - -
45. Gm11261 ENSMUSG00000085840 9 0.878 - 0.878 - - - - predicted gene 11261 [Source:MGI Symbol;Acc:MGI:3650239]
46. Gm8822 ENSMUSG00000082319 15 0.878 - 0.878 - - - - predicted gene 8822 [Source:MGI Symbol;Acc:MGI:3648640]
47. Gm12525 ENSMUSG00000078601 4 0.855 - - 0.855 - - - predicted gene 12525 [Source:MGI Symbol;Acc:MGI:3649596]
48. Col6a6 ENSMUSG00000043719 8 0.855 - - 0.855 - - - collagen, type VI, alpha 6 [Source:MGI Symbol;Acc:MGI:2444259]
49. Hrk ENSMUSG00000046607 35 0.841 - - - - 0.841 - harakiri, BCL2 interacting protein (contains only BH3 domain) [Source:MGI Symbol;Acc:MGI:1201608]
50. Gm26763 ENSMUSG00000097661 7 0.834 - 0.834 - - - - predicted gene, 26763 [Source:MGI Symbol;Acc:MGI:5477257]
51. Etohi1 Etohi1 19 0.834 - 0.834 - - - -
52. Nrn1l ENSMUSG00000044287 8 0.828 - 0.828 - - - - neuritin 1-like [Source:MGI Symbol;Acc:MGI:2443642]
53. AK157302 ENSMUSG00000078139 8 0.823 - - 0.823 - - - cDNA sequence AK157302 [Source:MGI Symbol;Acc:MGI:3574096]
54. Tlr13 ENSMUSG00000033777 2 0.823 - - 0.823 - - - toll-like receptor 13 [Source:MGI Symbol;Acc:MGI:3045213]
55. Gm6756 ENSMUSG00000063514 0 0.823 - - 0.823 - - - predicted gene 6756 [Source:MGI Symbol;Acc:MGI:3647509]
56. Txndc2 ENSMUSG00000050612 4 0.823 - - 0.823 - - - thioredoxin domain containing 2 (spermatozoa) [Source:MGI Symbol;Acc:MGI:2389312]
57. 1700063H04Rik ENSMUSG00000040657 2 0.823 - - 0.823 - - - RIKEN cDNA 1700063H04 gene [Source:MGI Symbol;Acc:MGI:1921519]
58. Lalba ENSMUSG00000022991 4 0.823 - - 0.823 - - - lactalbumin, alpha [Source:MGI Symbol;Acc:MGI:96742]
59. Gm26693 ENSMUSG00000097030 1 0.823 - - 0.823 - - - predicted gene, 26693 [Source:MGI Symbol;Acc:MGI:5477187]
60. Tbata ENSMUSG00000020096 1 0.823 - - 0.823 - - - thymus, brain and testes associated [Source:MGI Symbol;Acc:MGI:1923820]
61. Hist2h4 ENSMUSG00000091405 27 0.823 - - 0.823 - - - histone cluster 2, H4 [Source:MGI Symbol;Acc:MGI:2140113]
62. Fbxl13 ENSMUSG00000048520 2 0.823 - - 0.823 - - - F-box and leucine-rich repeat protein 13 [Source:MGI Symbol;Acc:MGI:2443416]
63. 5033426O07Rik ENSMUSG00000097097 2 0.823 - - 0.823 - - - RIKEN cDNA 5033426O07 gene [Source:MGI Symbol;Acc:MGI:1923251]
64. Cyp2a12 ENSMUSG00000060407 1 0.823 - - 0.823 - - - cytochrome P450, family 2, subfamily a, polypeptide 12 [Source:MGI Symbol;Acc:MGI:105055]
65. Gm11694 ENSMUSG00000081376 9 0.823 - - 0.823 - - - predicted gene 11694 [Source:MGI Symbol;Acc:MGI:3650243]
66. Drc1 ENSMUSG00000073102 4 0.823 - - 0.823 - - - dynein regulatory complex subunit 1 [Source:MGI Symbol;Acc:MGI:2685906]
67. Prdm8 ENSMUSG00000035456 310 0.823 - - - - 0.823 - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
68. Gm17092 ENSMUSG00000091623 1 0.823 - - 0.823 - - - predicted gene 17092 [Source:MGI Symbol;Acc:MGI:4937919]
69. Ptpn20 ENSMUSG00000021940 4 0.823 - - 0.823 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:MGI Symbol;Acc:MGI:1196295]
70. Rpl27-ps2 ENSMUSG00000082171 89 0.823 - - 0.823 - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
71. Gcm1 ENSMUSG00000023333 2 0.823 - - 0.823 - - - glial cells missing homolog 1 [Source:MGI Symbol;Acc:MGI:108045]
72. A730060N03Rik ENSMUSG00000092375 4 0.823 - - 0.823 - - - RIKEN cDNA A730060N03 gene [Source:MGI Symbol;Acc:MGI:2444190]
73. Gm15326 ENSMUSG00000086111 0 0.823 - - 0.823 - - - predicted gene 15326 [Source:MGI Symbol;Acc:MGI:3705205]
74. Csmd3 ENSMUSG00000022311 11 0.823 - - 0.823 - - - CUB and Sushi multiple domains 3 [Source:MGI Symbol;Acc:MGI:2386403]
75. Gm26686 ENSMUSG00000097283 15 0.823 - - 0.823 - - - predicted gene, 26686 [Source:MGI Symbol;Acc:MGI:5477180]
76. Gm13241 ENSMUSG00000073716 3 0.823 - - 0.823 - - - predicted gene 13241 [Source:MGI Symbol;Acc:MGI:3649920]
77. Gm14741 ENSMUSG00000083587 3 0.823 - - 0.823 - - - predicted gene 14741 [Source:MGI Symbol;Acc:MGI:3705423]
78. AA467197 ENSMUSG00000033213, ENSMUSG00000110868 7 0.823 - - 0.823 - - - expressed sequence AA467197 [Source:MGI Symbol;Acc:MGI:3034182]
79. Cd160 ENSMUSG00000038304 1 0.823 - - 0.823 - - - CD160 antigen [Source:MGI Symbol;Acc:MGI:1860383]
80. Gm26584 ENSMUSG00000097474 5 0.823 - - 0.823 - - - predicted gene, 26584 [Source:MGI Symbol;Acc:MGI:5477078]
81. Actrt3 ENSMUSG00000037737 5 0.823 - - 0.823 - - - actin related protein T3 [Source:MGI Symbol;Acc:MGI:1923902]
82. Gm8396 ENSMUSG00000049460 5 0.823 - - 0.823 - - - predicted gene 8396 [Source:MGI Symbol;Acc:MGI:3648154]
83. Morc2b ENSMUSG00000048602 11 0.823 - - 0.823 - - - microrchidia 2B [Source:MGI Symbol;Acc:MGI:3045293]
84. Clec4d ENSMUSG00000030144 0 0.823 - - 0.823 - - - C-type lectin domain family 4, member d [Source:MGI Symbol;Acc:MGI:1298389]
85. Gm15579 ENSMUSG00000086828 0 0.823 - - 0.823 - - - predicted gene 15579 [Source:MGI Symbol;Acc:MGI:3783027]
86. Rps12-ps17 ENSMUSG00000095137 1 0.823 - - 0.823 - - - ribosomal protein S12, pseudogene 17 [Source:MGI Symbol;Acc:MGI:3643968]
87. Gm23431 ENSMUSG00000077194 0 0.823 - - 0.823 - - - predicted gene, 23431 [Source:MGI Symbol;Acc:MGI:5453208]
88. Gm15789 ENSMUSG00000082057 2 0.823 - - 0.823 - - - predicted gene 15789 [Source:MGI Symbol;Acc:MGI:3783231]
89. D830025C05Rik ENSMUSG00000043794 2 0.823 - - 0.823 - - - RIKEN cDNA D830025C05 gene [Source:MGI Symbol;Acc:MGI:3698180]
90. Chrna10 ENSMUSG00000066279 1 0.823 - - 0.823 - - - cholinergic receptor, nicotinic, alpha polypeptide 10 [Source:MGI Symbol;Acc:MGI:3609260]
91. Pm20d2 ENSMUSG00000054659 4 0.823 - - 0.823 - - - peptidase M20 domain containing 2 [Source:MGI Symbol;Acc:MGI:2685270]
92. Gm14720 Gm14720 0 0.823 - - 0.823 - - -
93. Gm9967 ENSMUSG00000055323 7 0.823 - - 0.823 - - - predicted gene 9967 [Source:MGI Symbol;Acc:MGI:3704300]
94. Crygn ENSMUSG00000038135 6 0.823 - - 0.823 - - - crystallin, gamma N [Source:MGI Symbol;Acc:MGI:2449167]
95. Bloc1s2-ps ENSMUSG00000025201 1 0.823 - - 0.823 - - - biogenesis of lysosomal organelles complex-1, subunit 2, pseudogene [Source:MGI Symbol;Acc:MGI:3702045]
96. Gm25692 ENSMUSG00000093185 0 0.823 - - 0.823 - - - predicted gene, 25692 [Source:MGI Symbol;Acc:MGI:5455469]
97. Gm11646 ENSMUSG00000085033 1 0.823 - - 0.823 - - - predicted gene 11646 [Source:MGI Symbol;Acc:MGI:3649612]
98. AU022754 ENSMUSG00000097209 3 0.823 - - 0.823 - - - expressed sequence AU022754 [Source:MGI Symbol;Acc:MGI:2146143]
99. Batf ENSMUSG00000034266 4 0.823 - - 0.823 - - - basic leucine zipper transcription factor, ATF-like [Source:MGI Symbol;Acc:MGI:1859147]
100. Rpl32-ps ENSMUSG00000068969 18 0.823 - - 0.823 - - - ribosomal protein L32, pseudogene [Source:MGI Symbol;Acc:MGI:98039]

There are 54 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA