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Results for Six3

Gene Name Gene ID Reads Annotation
Six3 ENSMUSG00000038805 20 sine oculis-related homeobox 3 [Source:MGI Symbol;Acc:MGI:102764]







Genes with expression patterns similar to Six3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Six3 ENSMUSG00000038805 20 6 1.000 1.000 1.000 1.000 1.000 1.000 sine oculis-related homeobox 3 [Source:MGI Symbol;Acc:MGI:102764]
2. Vmn2r-ps18 ENSMUSG00000094849 6 1.996 0.996 1.000 - - - - vomeronasal 2, receptor, pseudogene 18 [Source:MGI Symbol;Acc:MGI:3761373]
3. Gm23300 ENSMUSG00000064646 9 1.749 - 0.877 0.872 - - - predicted gene, 23300 [Source:MGI Symbol;Acc:MGI:5453077]
4. Gm26852 ENSMUSG00000097231 9 1 - 1.000 - - - - predicted gene, 26852 [Source:MGI Symbol;Acc:MGI:5477346]
5. Gm26613 ENSMUSG00000097020 7 1 - 1.000 - - - - predicted gene, 26613 [Source:MGI Symbol;Acc:MGI:5477107]
6. Tmem182 ENSMUSG00000079588 3 1 - 1.000 - - - - transmembrane protein 182 [Source:MGI Symbol;Acc:MGI:1923725]
7. Gm11983 ENSMUSG00000099102 1 1 - 1.000 - - - - predicted gene 11983 [Source:MGI Symbol;Acc:MGI:3650519]
8. Styxl1 ENSMUSG00000019178 1 1 - 1.000 - - - - serine/threonine/tyrosine interacting-like 1 [Source:MGI Symbol;Acc:MGI:1923821]
9. 2510003D18Rik 2510003D18Rik 15 1 - 1.000 - - - -
10. Pllp ENSMUSG00000031775 2 1 - 1.000 - - - - plasma membrane proteolipid [Source:MGI Symbol;Acc:MGI:1915051]
11. Gm14863 ENSMUSG00000083608 1 1 - 1.000 - - - - predicted gene 14863 [Source:MGI Symbol;Acc:MGI:3705489]
12. Gm19967 ENSMUSG00000093858 65 1 - 1.000 - - - - predicted gene, 19967 [Source:MGI Symbol;Acc:MGI:5012152]
13. Proca1 ENSMUSG00000044122 39 1 - 1.000 - - - - protein interacting with cyclin A1 [Source:MGI Symbol;Acc:MGI:1918274]
14. Gm15878 ENSMUSG00000087542 3 1 - 1.000 - - - - predicted gene 15878 [Source:MGI Symbol;Acc:MGI:3801745]
15. Ccnb1ip1 ENSMUSG00000071470 5 1 - 1.000 - - - - cyclin B1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2685134]
16. Gm11867 ENSMUSG00000087402 6 1 - 1.000 - - - - predicted gene 11867 [Source:MGI Symbol;Acc:MGI:3650506]
17. Gm5083 ENSMUSG00000089815 11 1 - 1.000 - - - - predicted gene 5083 [Source:MGI Symbol;Acc:MGI:3779454]
18. BC046251 ENSMUSG00000086662 5 1 - 1.000 - - - - cDNA sequence BC046251 [Source:MGI Symbol;Acc:MGI:3039598]
19. Spata2l ENSMUSG00000033594 23 1 - 1.000 - - - - spermatogenesis associated 2-like [Source:MGI Symbol;Acc:MGI:1926029]
20. Tbr1 ENSMUSG00000035033 11 1 - 1.000 - - - - T-box brain gene 1 [Source:MGI Symbol;Acc:MGI:107404]
21. Sprn ENSMUSG00000045733 11 1 - 1.000 - - - - shadow of prion protein [Source:MGI Symbol;Acc:MGI:3582583]
22. Gm22228 ENSMUSG00000087989 3 1 - 1.000 - - - - predicted gene, 22228 [Source:MGI Symbol;Acc:MGI:5452005]
23. Gm22553 ENSMUSG00000088422 1 1 - 1.000 - - - - predicted gene, 22553 [Source:MGI Symbol;Acc:MGI:5452330]
24. Gm7887 ENSMUSG00000044211 9 1 - 1.000 - - - - predicted gene 7887 [Source:MGI Symbol;Acc:MGI:3648251]
25. Kcng4 ENSMUSG00000045246 3 1 - 1.000 - - - - potassium voltage-gated channel, subfamily G, member 4 [Source:MGI Symbol;Acc:MGI:1913983]
26. Mr1 ENSMUSG00000026471 5 1 - 1.000 - - - - major histocompatibility complex, class I-related [Source:MGI Symbol;Acc:MGI:1195463]
27. Vmn1r-ps63 ENSMUSG00000092248 2 1 - 1.000 - - - - vomeronasal 1 receptor, pseudogene 63 [Source:MGI Symbol;Acc:MGI:4438458]
28. Dhrs11 ENSMUSG00000034449 8 1 - 1.000 - - - - dehydrogenase/reductase (SDR family) member 11 [Source:MGI Symbol;Acc:MGI:2652816]
29. Col4a4 ENSMUSG00000067158 1 1 - 1.000 - - - - collagen, type IV, alpha 4 [Source:MGI Symbol;Acc:MGI:104687]
30. Brinp2 ENSMUSG00000004031 17 1 - 1.000 - - - - bone morphogenic protein/retinoic acid inducible neural-specific 2 [Source:MGI Symbol;Acc:MGI:2443333]
31. Tfr2 ENSMUSG00000029716 51 1 1.000 - - - - - transferrin receptor 2 [Source:MGI Symbol;Acc:MGI:1354956]
32. Kcnj3 ENSMUSG00000026824 4 1 - 1.000 - - - - potassium inwardly-rectifying channel, subfamily J, member 3 [Source:MGI Symbol;Acc:MGI:104742]
33. Gm7598 ENSMUSG00000087390 18 1 - 1.000 - - - - predicted gene 7598 [Source:MGI Symbol;Acc:MGI:3644312]
34. Gm25360 ENSMUSG00000094655 11 1 - 1.000 - - - - predicted gene, 25360 [Source:MGI Symbol;Acc:MGI:5455137]
35. 4933408N05Rik ENSMUSG00000084848 1 1 - 1.000 - - - - RIKEN cDNA 4933408N05 gene [Source:MGI Symbol;Acc:MGI:1918372]
36. Rag1 ENSMUSG00000061311 2 1 - 1.000 - - - - recombination activating gene 1 [Source:MGI Symbol;Acc:MGI:97848]
37. Gm15680 ENSMUSG00000090116 3 1 - 1.000 - - - - predicted gene 15680 [Source:MGI Symbol;Acc:MGI:3783122]
38. Gm15751 ENSMUSG00000086753 3 1 - 1.000 - - - - predicted gene 15751 [Source:MGI Symbol;Acc:MGI:3783193]
39. Gm13643 Gm13643 3 1 - 1.000 - - - -
40. Gm9506 ENSMUSG00000081086 4 1 - 1.000 - - - - predicted gene 9506 [Source:MGI Symbol;Acc:MGI:3779916]
41. Pcdhb11 ENSMUSG00000051486 8 1 - 1.000 - - - - protocadherin beta 11 [Source:MGI Symbol;Acc:MGI:2136746]
42. Fam194a Fam194a 6 1 - 1.000 - - - -
43. Gm12002 ENSMUSG00000086584 11 0.996 0.996 - - - - - predicted gene 12002 [Source:MGI Symbol;Acc:MGI:3651521]
44. Gm15731 ENSMUSG00000086528 4 0.996 0.996 - - - - - predicted gene 15731 [Source:MGI Symbol;Acc:MGI:3783174]
45. 4930554G24Rik ENSMUSG00000085452 5 0.996 0.996 - - - - - RIKEN cDNA 4930554G24 gene [Source:MGI Symbol;Acc:MGI:1922530]
46. Gm12280 ENSMUSG00000085748 8 0.996 0.996 - - - - - predicted gene 12280 [Source:MGI Symbol;Acc:MGI:3652011]
47. RP24-225I21.1 RP24-225I21.1 8 0.996 0.996 - - - - -
48. Gm20478 ENSMUSG00000092474 5 0.996 0.996 - - - - - predicted gene 20478 [Source:MGI Symbol;Acc:MGI:5141943]
49. Gabrp ENSMUSG00000020159 21 0.996 0.996 - - - - - gamma-aminobutyric acid (GABA) A receptor, pi [Source:MGI Symbol;Acc:MGI:2387597]
50. C630016N16Rik C630016N16Rik 15 0.996 0.996 - - - - -
51. Wnt8a ENSMUSG00000012282 4 0.996 0.996 - - - - - wingless-type MMTV integration site family, member 8A [Source:MGI Symbol;Acc:MGI:107924]
52. Adra2b ENSMUSG00000058620 16 0.996 0.996 - - - - - adrenergic receptor, alpha 2b [Source:MGI Symbol;Acc:MGI:87935]
53. 5730522E02Rik ENSMUSG00000032985 12 0.987 0.987 - - - - - RIKEN cDNA 5730522E02 gene [Source:MGI Symbol;Acc:MGI:1917876]
54. 5930422O12Rik ENSMUSG00000048544 74 0.985 0.985 - - - - - RIKEN cDNA 5930422O12 gene [Source:MGI Symbol;Acc:MGI:2442538]
55. D330050G23Rik ENSMUSG00000085316 11 0.98 0.980 - - - - - RIKEN cDNA D330050G23 gene [Source:MGI Symbol;Acc:MGI:2445155]
56. Kif17 ENSMUSG00000028758 16 0.973 0.973 - - - - - kinesin family member 17 [Source:MGI Symbol;Acc:MGI:1098229]
57. Gm13830 ENSMUSG00000086368 29 0.97 0.970 - - - - - predicted gene 13830 [Source:MGI Symbol;Acc:MGI:3651141]
58. Tnip3 ENSMUSG00000044162 7 0.969 0.969 - - - - - TNFAIP3 interacting protein 3 [Source:MGI Symbol;Acc:MGI:3041165]
59. Tmem30b ENSMUSG00000034435 56 0.967 0.967 - - - - - transmembrane protein 30B [Source:MGI Symbol;Acc:MGI:2442082]
60. Elfn1 ENSMUSG00000048988 34 0.963 0.963 - - - - - leucine rich repeat and fibronectin type III, extracellular 1 [Source:MGI Symbol;Acc:MGI:2442479]
61. Kcnc4 ENSMUSG00000027895 22 0.961 0.961 - - - - - potassium voltage gated channel, Shaw-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96670]
62. Mpl ENSMUSG00000006389 46 0.96 0.960 - - - - - myeloproliferative leukemia virus oncogene [Source:MGI Symbol;Acc:MGI:97076]
63. Gm13498 ENSMUSG00000083270 4 0.96 0.960 - - - - - predicted gene 13498 [Source:MGI Symbol;Acc:MGI:3650381]
64. Axdnd1 ENSMUSG00000026601 11 0.96 0.960 - - - - - axonemal dynein light chain domain containing 1 [Source:MGI Symbol;Acc:MGI:1924602]
65. 4930519F16Rik ENSMUSG00000031325 7 0.956 - 0.956 - - - - RIKEN cDNA 4930519F16 gene [Source:MGI Symbol;Acc:MGI:1922356]
66. Sp140 ENSMUSG00000070031 32 0.953 0.953 - - - - - Sp140 nuclear body protein [Source:MGI Symbol;Acc:MGI:3702467]
67. 4833412C05Rik ENSMUSG00000097697 9 0.952 0.952 - - - - - RIKEN cDNA 4833412C05 gene [Source:MGI Symbol;Acc:MGI:1921154]
68. Gm11128 Gm11128 17 0.95 0.950 - - - - -
69. Lrrc31 ENSMUSG00000074653 173 0.947 0.947 - - - - - leucine rich repeat containing 31 [Source:MGI Symbol;Acc:MGI:2443864]
70. Gm26637 ENSMUSG00000097567 17 0.942 0.942 - - - - - predicted gene, 26637 [Source:MGI Symbol;Acc:MGI:5477131]
71. Gm22613 ENSMUSG00000084628 31 0.937 0.937 - - - - - predicted gene, 22613 [Source:MGI Symbol;Acc:MGI:5452390]
72. Tecrl ENSMUSG00000049537 18 0.934 - 0.934 - - - - trans-2,3-enoyl-CoA reductase-like [Source:MGI Symbol;Acc:MGI:2444966]
73. 9530056K15Rik ENSMUSG00000045345 9 0.932 0.932 - - - - - RIKEN cDNA 9530056K15 gene [Source:MGI Symbol;Acc:MGI:2444456]
74. Gm16306 ENSMUSG00000089780 25 0.931 0.931 - - - - - predicted gene 16306 [Source:MGI Symbol;Acc:MGI:3826555]
75. Pnpla3 ENSMUSG00000041653 31 0.928 0.928 - - - - - patatin-like phospholipase domain containing 3 [Source:MGI Symbol;Acc:MGI:2151796]
76. B230369F24Rik ENSMUSG00000086350, ENSMUSG00000111408 45 0.925 - 0.925 - - - - RIKEN cDNA B230369F24 gene [Source:MGI Symbol;Acc:MGI:2443392]
77. Tmem144 ENSMUSG00000027956 18 0.923 0.923 - - - - - transmembrane protein 144 [Source:MGI Symbol;Acc:MGI:1917902]
78. Masp1 ENSMUSG00000022887 9 0.921 0.921 - - - - - mannan-binding lectin serine peptidase 1 [Source:MGI Symbol;Acc:MGI:88492]
79. 4930564K09Rik 4930564K09Rik 5 0.92 0.920 - - - - -
80. Gm11221 ENSMUSG00000082998 16 0.913 0.913 - - - - - predicted gene 11221 [Source:MGI Symbol;Acc:MGI:3651633]
81. Hbq1b ENSMUSG00000073063 63 0.911 0.911 - - - - - hemoglobin, theta 1B [Source:MGI Symbol;Acc:MGI:3613460]
82. Baalc ENSMUSG00000022296, ENSMUSG00000107249 9 0.902 - - - - - 0.902 brain and acute leukemia, cytoplasmic [Source:MGI Symbol;Acc:MGI:1928704]
83. Gp1ba ENSMUSG00000050675 11 0.902 - - - - - 0.902 glycoprotein 1b, alpha polypeptide [Source:MGI Symbol;Acc:MGI:1333744]
84. A930012O16Rik ENSMUSG00000054181 19 0.897 - 0.897 - - - - RIKEN cDNA A930012O16 gene [Source:MGI Symbol;Acc:MGI:2442255]
85. Gm12716 ENSMUSG00000081584 9 0.893 0.893 - - - - - predicted gene 12716 [Source:MGI Symbol;Acc:MGI:3650738]
86. 2310026L22Rik ENSMUSG00000078519 6 0.889 - - 0.889 - - - RIKEN cDNA 2310026L22 gene [Source:MGI Symbol;Acc:MGI:1916844]
87. Gm6887 ENSMUSG00000092301 2 0.889 - - 0.889 - - - predicted gene 6887 [Source:MGI Symbol;Acc:MGI:3649086]
88. Gm7701 ENSMUSG00000091363 34 0.889 - 0.889 - - - - predicted gene 7701 [Source:MGI Symbol;Acc:MGI:3646506]
89. Tmod4 ENSMUSG00000005628 30 0.88 - 0.880 - - - - tropomodulin 4 [Source:MGI Symbol;Acc:MGI:1355285]
90. 4930512M02Rik ENSMUSG00000062511 97 0.879 - 0.879 - - - - RIKEN cDNA 4930512M02 gene [Source:MGI Symbol;Acc:MGI:1922360]
91. Slc25a31 ENSMUSG00000069041, ENSMUSG00000116218 13 0.877 - 0.877 - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 [Source:MGI Symbol;Acc:MGI:1920583]
92. Has2os ENSMUSG00000086541 9 0.877 - 0.877 - - - - hyaluronan synthase 2, opposite strand [Source:MGI Symbol;Acc:MGI:3643465]
93. Gm3307 ENSMUSG00000093751 2 0.877 - 0.877 - - - - predicted gene 3307 [Source:MGI Symbol;Acc:MGI:3781485]
94. Gpr137c ENSMUSG00000049092 15 0.877 - 0.877 - - - - G protein-coupled receptor 137C [Source:MGI Symbol;Acc:MGI:1917963]
95. Gm7108 ENSMUSG00000083253 12 0.872 - - 0.872 - - - predicted gene 7108 [Source:MGI Symbol;Acc:MGI:3645440]
96. Gm2464 ENSMUSG00000097338, ENSMUSG00000102215 9 0.872 - - 0.872 - - - predicted gene 2464 [Source:MGI Symbol;Acc:MGI:3780631]
97. Sult6b1 ENSMUSG00000038045 4 0.872 - - 0.872 - - - sulfotransferase family, cytosolic, 6B, member 1 [Source:MGI Symbol;Acc:MGI:1920921]
98. AU019990 ENSMUSG00000074783 5 0.872 - - 0.872 - - - expressed sequence AU019990 [Source:MGI Symbol;Acc:MGI:3034641]
99. 4930527J03Rik ENSMUSG00000070489 2 0.872 - - 0.872 - - - RIKEN cDNA 4930527J03 gene [Source:MGI Symbol;Acc:MGI:1922414]
100. Sohlh2 ENSMUSG00000027794 2 0.872 - - 0.872 - - - spermatogenesis and oogenesis specific basic helix-loop-helix 2 [Source:MGI Symbol;Acc:MGI:1921684]

There are 199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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