Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sim1

Gene Name Gene ID Reads Annotation
Sim1 ENSMUSG00000019913 382 single-minded family bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:98306]







Genes with expression patterns similar to Sim1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sim1 ENSMUSG00000019913 382 6 1.000 1.000 1.000 1.000 1.000 1.000 single-minded family bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:98306]
2. Gm26764 ENSMUSG00000097667 599 0.798 - - 0.798 - - - predicted gene, 26764 [Source:MGI Symbol;Acc:MGI:5477258]
3. Chrna1 ENSMUSG00000027107 89 0.793 - - 0.793 - - - cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) [Source:MGI Symbol;Acc:MGI:87885]
4. Gm6297 ENSMUSG00000097123 46 0.789 - - 0.789 - - - predicted gene 6297 [Source:MGI Symbol;Acc:MGI:3779584]
5. Cox7c ENSMUSG00000017778 1051 0.788 - - 0.788 - - - cytochrome c oxidase subunit 7C [Source:MGI Symbol;Acc:MGI:103226]
6. Adamts6 ENSMUSG00000046169 49 0.782 - - 0.782 - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 [Source:MGI Symbol;Acc:MGI:1347348]
7. Fcgbp ENSMUSG00000047730 12 0.78 - - 0.780 - - - Fc fragment of IgG binding protein [Source:MGI Symbol;Acc:MGI:2444336]
8. Rpl17-ps5 ENSMUSG00000081855 19 0.777 - - 0.777 - - - ribosomal protein L17, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3704246]
9. Guca1a ENSMUSG00000023982, ENSMUSG00000116418 17 0.776 - - 0.776 - - - guanylate cyclase activator 1a (retina) [Source:MGI Symbol;Acc:MGI:102770]
10. Gm12408 ENSMUSG00000085980 33 0.776 - - 0.776 - - - predicted gene 12408 [Source:MGI Symbol;Acc:MGI:3649921]
11. Adra1a ENSMUSG00000045875 36 0.774 - - 0.774 - - - adrenergic receptor, alpha 1a [Source:MGI Symbol;Acc:MGI:104773]
12. Gm8864 ENSMUSG00000081892 8 0.774 - - 0.774 - - - predicted gene 8864 [Source:MGI Symbol;Acc:MGI:3644830]
13. 4930404I05Rik ENSMUSG00000087354 13 0.774 - - 0.774 - - - RIKEN cDNA 4930404I05 gene [Source:MGI Symbol;Acc:MGI:1914644]
14. Gm16853 ENSMUSG00000097665 8 0.774 - - 0.774 - - - predicted gene, 16853 [Source:MGI Symbol;Acc:MGI:4439777]
15. Gm23046 ENSMUSG00000088994 5 0.774 - - 0.774 - - - predicted gene, 23046 [Source:MGI Symbol;Acc:MGI:5452823]
16. Ttll11 ENSMUSG00000026885 15 0.774 - - 0.774 - - - tubulin tyrosine ligase-like family, member 11 [Source:MGI Symbol;Acc:MGI:1921660]
17. Cnih3 ENSMUSG00000026514 12 0.774 - - 0.774 - - - cornichon family AMPA receptor auxiliary protein 3 [Source:MGI Symbol;Acc:MGI:1920228]
18. Exosc4 ENSMUSG00000034259 836 0.771 - - 0.771 - - - exosome component 4 [Source:MGI Symbol;Acc:MGI:1923576]
19. Gm21983 ENSMUSG00000095538 26 0.771 - - 0.771 - - - predicted gene 21983 [Source:MGI Symbol;Acc:MGI:5439452]
20. Usp44 ENSMUSG00000020020 12 0.771 - - 0.771 - - - ubiquitin specific peptidase 44 [Source:MGI Symbol;Acc:MGI:3045318]
21. Gm9670 ENSMUSG00000082383 13 0.77 - - 0.770 - - - predicted gene 9670 [Source:MGI Symbol;Acc:MGI:3780078]
22. Klhl3 ENSMUSG00000014164 43 0.769 - - 0.769 - - - kelch-like 3 [Source:MGI Symbol;Acc:MGI:2445185]
23. Cd37 ENSMUSG00000030798 29 0.769 - - 0.769 - - - CD37 antigen [Source:MGI Symbol;Acc:MGI:88330]
24. Arhgef4 ENSMUSG00000037509 150 0.769 - - - - 0.769 - Rho guanine nucleotide exchange factor (GEF) 4 [Source:MGI Symbol;Acc:MGI:2442507]
25. RP23-279M5.3 RP23-279M5.3 61 0.768 - - 0.768 - - -
26. Pla2g2c ENSMUSG00000028750 14 0.768 - - 0.768 - - - phospholipase A2, group IIC [Source:MGI Symbol;Acc:MGI:106638]
27. Sncg ENSMUSG00000023064 1702 0.767 - - 0.767 - - - synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
28. Pbld1 ENSMUSG00000112129 727 0.767 - - 0.767 - - - phenazine biosynthesis-like protein domain containing 1 [Source:MGI Symbol;Acc:MGI:1915621]
29. 9130230L23Rik ENSMUSG00000054598 47 0.766 - - 0.766 - - - RIKEN cDNA 9130230L23 gene [Source:MGI Symbol;Acc:MGI:3041166]
30. Bambi-ps1 ENSMUSG00000081219 18 0.765 - - 0.765 - - - BMP and activin membrane-bound inhibitor, pseudogene (Xenopus laevis) [Source:MGI Symbol;Acc:MGI:1932402]
31. Gm13815 ENSMUSG00000080860 47 0.765 - - 0.765 - - - predicted gene 13815 [Source:MGI Symbol;Acc:MGI:3649318]
32. Ly86 ENSMUSG00000021423 23 0.764 - - 0.764 - - - lymphocyte antigen 86 [Source:MGI Symbol;Acc:MGI:1321404]
33. C1qtnf3 ENSMUSG00000058914 1227 0.764 0.764 - - - - - C1q and tumor necrosis factor related protein 3 [Source:MGI Symbol;Acc:MGI:1932136]
34. 5830454E08Rik ENSMUSG00000052658 29 0.763 - - 0.763 - - - RIKEN cDNA 5830454E08 gene [Source:MGI Symbol;Acc:MGI:1923350]
35. Gm13525 ENSMUSG00000082879 27 0.759 - - 0.759 - - - predicted gene 13525 [Source:MGI Symbol;Acc:MGI:3650225]
36. Myh7 ENSMUSG00000053093 156 0.759 - - - - - 0.759 myosin, heavy polypeptide 7, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:2155600]
37. Scd3 ENSMUSG00000025202 38 0.759 - - 0.759 - - - stearoyl-coenzyme A desaturase 3 [Source:MGI Symbol;Acc:MGI:1353437]
38. Tmem179 ENSMUSG00000054013 29 0.759 - - 0.759 - - - transmembrane protein 179 [Source:MGI Symbol;Acc:MGI:2144891]
39. Gm12966 ENSMUSG00000070729 13 0.759 - - 0.759 - - - predicted gene 12966 [Source:MGI Symbol;Acc:MGI:3652043]
40. Gm6644 ENSMUSG00000100309 137 0.758 - - 0.758 - - - predicted gene 6644 [Source:MGI Symbol;Acc:MGI:3644951]
41. B930094E09Rik ENSMUSG00000092124 59 0.758 - - 0.758 - - - RIKEN cDNA B930094E09 gene [Source:MGI Symbol;Acc:MGI:3603750]
42. Syngr3 ENSMUSG00000007021 86 0.758 - - 0.758 - - - synaptogyrin 3 [Source:MGI Symbol;Acc:MGI:1341881]
43. Pax1 ENSMUSG00000037034 2297 0.758 0.758 - - - - - paired box 1 [Source:MGI Symbol;Acc:MGI:97485]
44. C1qtnf7 ENSMUSG00000061535 450 0.752 - - 0.752 - - - C1q and tumor necrosis factor related protein 7 [Source:MGI Symbol;Acc:MGI:1925911]
45. Gm26799 ENSMUSG00000097579 157 0.751 0.751 - - - - - predicted gene, 26799 [Source:MGI Symbol;Acc:MGI:5477293]
46. AI646519 ENSMUSG00000087521 162 0.75 0.750 - - - - - expressed sequence AI646519 [Source:MGI Symbol;Acc:MGI:2139024]
47. Pax9 ENSMUSG00000001497 255 0.749 0.749 - - - - - paired box 9 [Source:MGI Symbol;Acc:MGI:97493]
48. Inpp4b ENSMUSG00000037940 72 0.748 - - 0.748 - - - inositol polyphosphate-4-phosphatase, type II [Source:MGI Symbol;Acc:MGI:2158925]
49. Plag1 ENSMUSG00000003282 109 0.748 - - 0.748 - - - pleiomorphic adenoma gene 1 [Source:MGI Symbol;Acc:MGI:1891916]
50. Arg1 ENSMUSG00000019987 923 0.746 - - 0.746 - - - arginase, liver [Source:MGI Symbol;Acc:MGI:88070]
51. Chrng ENSMUSG00000026253 108 0.743 - - - - - 0.743 cholinergic receptor, nicotinic, gamma polypeptide [Source:MGI Symbol;Acc:MGI:87895]
52. Mrpl43 ENSMUSG00000025208 3163 0.741 - - 0.741 - - - mitochondrial ribosomal protein L43 [Source:MGI Symbol;Acc:MGI:2137229]
53. 9130410C08Rik ENSMUSG00000085323 18 0.741 - - 0.741 - - - RIKEN cDNA 9130410C08 gene [Source:MGI Symbol;Acc:MGI:1918862]
54. E230016M11Rik ENSMUSG00000087231 44 0.74 - - 0.740 - - - RIKEN cDNA E230016M11 gene [Source:MGI Symbol;Acc:MGI:2443524]
55. Gm15728 ENSMUSG00000086075 57 0.738 - - 0.738 - - - predicted gene 15728 [Source:MGI Symbol;Acc:MGI:3783171]
56. AF357399 ENSMUSG00000077711 68 0.736 - - 0.736 - - - snoRNA AF357399 [Source:MGI Symbol;Acc:MGI:5439844]
57. Gm7935 ENSMUSG00000075609 42 0.736 - - 0.736 - - - predicted pseudogene 7935 [Source:MGI Symbol;Acc:MGI:3646370]
58. Zkscan4 ENSMUSG00000054931 269 0.736 - - 0.736 - - - zinc finger with KRAB and SCAN domains 4 [Source:MGI Symbol;Acc:MGI:3649412]
59. Rpl31-ps16 ENSMUSG00000097803 98 0.732 - - 0.732 - - - ribosomal protein L31, pseudogene 16 [Source:MGI Symbol;Acc:MGI:3648831]
60. Pla2g16 ENSMUSG00000060675 237 0.732 - - 0.732 - - - phospholipase A2, group XVI [Source:MGI Symbol;Acc:MGI:2179715]
61. Gpd1 ENSMUSG00000023019 100 0.732 - - 0.732 - - - glycerol-3-phosphate dehydrogenase 1 (soluble) [Source:MGI Symbol;Acc:MGI:95679]
62. Capn7 ENSMUSG00000021893 3215 0.731 - - 0.731 - - - calpain 7 [Source:MGI Symbol;Acc:MGI:1338030]
63. Med29 ENSMUSG00000003444 1299 0.73 - - 0.730 - - - mediator complex subunit 29 [Source:MGI Symbol;Acc:MGI:1914474]
64. Tmem163 ENSMUSG00000026347 282 0.729 - - 0.729 - - - transmembrane protein 163 [Source:MGI Symbol;Acc:MGI:1919410]
65. Pcsk1n ENSMUSG00000039278 245 0.729 - - 0.729 - - - proprotein convertase subtilisin/kexin type 1 inhibitor [Source:MGI Symbol;Acc:MGI:1353431]
66. Akt3 ENSMUSG00000019699 1570 0.727 - - 0.727 - - - thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
67. Tcf15 ENSMUSG00000068079 1156 0.726 - - - - - 0.726 transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
68. Reep1 ENSMUSG00000052852 1394 0.726 - - 0.726 - - - receptor accessory protein 1 [Source:MGI Symbol;Acc:MGI:1098827]
69. Gtf2h5 ENSMUSG00000034345 6035 0.723 - - 0.723 - - - general transcription factor IIH, polypeptide 5 [Source:MGI Symbol;Acc:MGI:107227]
70. Ankrd1 ENSMUSG00000024803 49 0.721 - - 0.721 - - - ankyrin repeat domain 1 (cardiac muscle) [Source:MGI Symbol;Acc:MGI:1097717]
71. Rundc3b ENSMUSG00000040570 214 0.72 - - 0.720 - - - RUN domain containing 3B [Source:MGI Symbol;Acc:MGI:2685286]
72. Cox20 ENSMUSG00000026500, ENSMUSG00000111742 35 0.719 - - 0.719 - - - cytochrome c oxidase assembly protein 20 [Source:MGI Symbol;Acc:MGI:1913609]
73. Nkx2-9 ENSMUSG00000058669 17 0.712 0.712 - - - - - NK2 homeobox 9 [Source:MGI Symbol;Acc:MGI:1270158]
74. Acyp1 ENSMUSG00000008822 1101 0.712 - - 0.712 - - - acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
75. Fdft1 ENSMUSG00000021273 5782 0.705 - - 0.705 - - - farnesyl diphosphate farnesyl transferase 1 [Source:MGI Symbol;Acc:MGI:102706]
76. Bbs10 ENSMUSG00000035759 319 0.704 - - 0.704 - - - Bardet-Biedl syndrome 10 (human) [Source:MGI Symbol;Acc:MGI:1919019]
77. Nudt6 ENSMUSG00000050174 128 0.702 - - 0.702 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:MGI Symbol;Acc:MGI:2387618]
78. Nrxn1 ENSMUSG00000024109 197 0.7 - - 0.700 - - - neurexin I [Source:MGI Symbol;Acc:MGI:1096391]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA