Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scn4a

Gene Name Gene ID Reads Annotation
Scn4a ENSMUSG00000001027 4 sodium channel, voltage-gated, type IV, alpha [Source:MGI Symbol;Acc:MGI:98250]







Genes with expression patterns similar to Scn4a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scn4a ENSMUSG00000001027 4 3 - - 1.000 1.000 - 1.000 sodium channel, voltage-gated, type IV, alpha [Source:MGI Symbol;Acc:MGI:98250]
2. Serpina3b ENSMUSG00000066364 4 1.758 - - 1.000 - - 0.758 serine (or cysteine) peptidase inhibitor, clade A, member 3B [Source:MGI Symbol;Acc:MGI:2182835]
3. Gnat1 ENSMUSG00000034837 9 1.715 - - 0.749 0.966 - - guanine nucleotide binding protein, alpha transducing 1 [Source:MGI Symbol;Acc:MGI:95778]
4. Gm16090 ENSMUSG00000085595 0 1 - - 1.000 - - - predicted gene 16090 [Source:MGI Symbol;Acc:MGI:3801885]
5. Gm20727 Gm20727 9 1 - - 1.000 - - -
6. Traf1 ENSMUSG00000026875 9 1 - - 1.000 - - - TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]
7. Gm26807 ENSMUSG00000097484 14 1 - - 1.000 - - - predicted gene, 26807 [Source:MGI Symbol;Acc:MGI:5477301]
8. Gm12709 ENSMUSG00000085181 0 1 - - 1.000 - - - predicted gene 12709 [Source:MGI Symbol;Acc:MGI:3651946]
9. Gm6913 ENSMUSG00000075288 5 1 - - 1.000 - - - predicted gene 6913 [Source:MGI Symbol;Acc:MGI:3648267]
10. 4930506C21Rik ENSMUSG00000087478 1 1 - - 1.000 - - - RIKEN cDNA 4930506C21 gene [Source:MGI Symbol;Acc:MGI:1922310]
11. Anxa11 ENSMUSG00000021866 0 1 - - 1.000 - - - annexin A11 [Source:MGI Symbol;Acc:MGI:108481]
12. Gm13498 ENSMUSG00000083270 4 1 - - 1.000 - - - predicted gene 13498 [Source:MGI Symbol;Acc:MGI:3650381]
13. Amd-ps3 ENSMUSG00000060096 3 1 - - 1.000 - - - S-adenosylmethionine decarboxylase, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3704487]
14. KCNQ1OT1_1 KCNQ1OT1_1 0 1 - - 1.000 - - -
15. Amd-ps4 ENSMUSG00000019836 1 1 - - 1.000 - - - S-adenosylmethionine decarboxylase, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3650439]
16. Gm11244 ENSMUSG00000081936 3 1 - - - 1.000 - - predicted gene 11244 [Source:MGI Symbol;Acc:MGI:3651883]
17. Naip6 ENSMUSG00000078942 18 1 - - 1.000 - - - NLR family, apoptosis inhibitory protein 6 [Source:MGI Symbol;Acc:MGI:1298222]
18. Snora47 ENSMUSG00000088108 0 1 - - 1.000 - - - small nucleolar RNA, H/ACA box 47 [Source:MGI Symbol;Acc:MGI:3819507]
19. Gm24613 ENSMUSG00000065200 1 1 - - 1.000 - - - predicted gene, 24613 [Source:MGI Symbol;Acc:MGI:5454390]
20. Gm5067 ENSMUSG00000090671 0 1 - - 1.000 - - - predicted gene 5067 [Source:MGI Symbol;Acc:MGI:3644982]
21. Gm15929 ENSMUSG00000086032 3 1 - - 1.000 - - - predicted gene 15929 [Source:MGI Symbol;Acc:MGI:3802090]
22. Gm10430 Gm10430 4 1 - - 1.000 - - -
23. Gm12279 ENSMUSG00000087120 4 1 - - 1.000 - - - predicted gene 12279 [Source:MGI Symbol;Acc:MGI:3649630]
24. Myl3 ENSMUSG00000059741 20 1 - - - 1.000 - - myosin, light polypeptide 3 [Source:MGI Symbol;Acc:MGI:97268]
25. Gm8807 ENSMUSG00000094153 1 1 - - 1.000 - - - predicted gene 8807 [Source:MGI Symbol;Acc:MGI:3643510]
26. Gm13136 ENSMUSG00000081179 13 1 - - - 1.000 - - predicted gene 13136 [Source:MGI Symbol;Acc:MGI:3649290]
27. Sidt1 ENSMUSG00000022696 8 1 - - 1.000 - - - SID1 transmembrane family, member 1 [Source:MGI Symbol;Acc:MGI:2443155]
28. Gm17028 ENSMUSG00000090638 1 1 - - 1.000 - - - predicted gene 17028 [Source:MGI Symbol;Acc:MGI:4937855]
29. Gstp2 ENSMUSG00000038155, ENSMUSG00000097808 6 1 - - 1.000 - - - glutathione S-transferase, pi 2 [Source:MGI Symbol;Acc:MGI:95864]
30. Gm13461 ENSMUSG00000081999 1 1 - - 1.000 - - - predicted gene 13461 [Source:MGI Symbol;Acc:MGI:3650103]
31. Rps24-ps2 ENSMUSG00000069125 7 1 - - - 1.000 - - ribosomal protein S24, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649025]
32. Gm4943 0 1 - - 1.000 - - - predicted pseudogene 4943, transcript variant X3
33. Gm20631 ENSMUSG00000093650 14 1 - - 1.000 - - - predicted gene 20631 [Source:MGI Symbol;Acc:MGI:5313078]
34. Gm14101 ENSMUSG00000084393 5 1 - - - 1.000 - - predicted gene 14101 [Source:MGI Symbol;Acc:MGI:3651973]
35. Gm22299 ENSMUSG00000064597, ENSMUSG00000116186 14 1 - - 1.000 - - - predicted gene, 22299 [Source:MGI Symbol;Acc:MGI:5452076]
36. Pck1 ENSMUSG00000027513 4 1 - - 1.000 - - - phosphoenolpyruvate carboxykinase 1, cytosolic [Source:MGI Symbol;Acc:MGI:97501]
37. Ms4a2 ENSMUSG00000024680 1 1 - - 1.000 - - - membrane-spanning 4-domains, subfamily A, member 2 [Source:MGI Symbol;Acc:MGI:95495]
38. Proc ENSMUSG00000024386 3 1 - - 1.000 - - - protein C [Source:MGI Symbol;Acc:MGI:97771]
39. Abcb1b ENSMUSG00000028970 23 1 - - 1.000 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 1B [Source:MGI Symbol;Acc:MGI:97568]
40. Gm5796 ENSMUSG00000096775 2 1 - - 1.000 - - - predicted gene 5796 [Source:MGI Symbol;Acc:MGI:3779522]
41. Dnaja4 ENSMUSG00000032285 6 1 - - - 1.000 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:MGI Symbol;Acc:MGI:1927638]
42. Gm10408 ENSMUSG00000072739 1 1 - - 1.000 - - - predicted gene 10408 [Source:MGI Symbol;Acc:MGI:3704423]
43. Gm16063 ENSMUSG00000085708 0 1 - - 1.000 - - - predicted gene 16063 [Source:MGI Symbol;Acc:MGI:3801955]
44. 9930111J21Rik1 ENSMUSG00000069893 7 1 - - 1.000 - - - RIKEN cDNA 9930111J21 gene 1 [Source:MGI Symbol;Acc:MGI:3041173]
45. Gm24265 ENSMUSG00000096243 20 1 - - 1.000 - - - predicted gene, 24265 [Source:MGI Symbol;Acc:MGI:5454042]
46. Gm26706 ENSMUSG00000097014 1 1 - - 1.000 - - - predicted gene, 26706 [Source:MGI Symbol;Acc:MGI:5477200]
47. Gm16256 Gm16256 2 1 - - 1.000 - - -
48. Ttc39d ENSMUSG00000046196 3 1 - - 1.000 - - - tetratricopeptide repeat domain 39D [Source:MGI Symbol;Acc:MGI:1914987]
49. Gm15938 ENSMUSG00000087532 1 1 - - 1.000 - - - predicted gene 15938 [Source:MGI Symbol;Acc:MGI:3801775]
50. Hsd17b13 ENSMUSG00000034528 3 1 - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 13 [Source:MGI Symbol;Acc:MGI:2140804]
51. Gm11438 ENSMUSG00000083932 2 1 - - 1.000 - - - predicted gene 11438 [Source:MGI Symbol;Acc:MGI:3650281]
52. Oas3 ENSMUSG00000032661 11 1 - - 1.000 - - - 2'-5' oligoadenylate synthetase 3 [Source:MGI Symbol;Acc:MGI:2180850]
53. Gm12403 ENSMUSG00000082186 3 1 - - 1.000 - - - predicted gene 12403 [Source:MGI Symbol;Acc:MGI:3650109]
54. Serpinb6c ENSMUSG00000052180 5 1 - - 1.000 - - - serine (or cysteine) peptidase inhibitor, clade B, member 6c [Source:MGI Symbol;Acc:MGI:2145481]
55. Gm17229 ENSMUSG00000092051 7 1 - - 1.000 - - - predicted gene 17229 [Source:MGI Symbol;Acc:MGI:4938056]
56. Grid2ip ENSMUSG00000010825 2 1 - - 1.000 - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1 [Source:MGI Symbol;Acc:MGI:2176213]
57. Tmc5 ENSMUSG00000030650 4 1 - - 1.000 - - - transmembrane channel-like gene family 5 [Source:MGI Symbol;Acc:MGI:1921674]
58. Gm23238 ENSMUSG00000064941 1 1 - - 1.000 - - - predicted gene, 23238 [Source:MGI Symbol;Acc:MGI:5453015]
59. Gm14878 ENSMUSG00000083432 10 1 - - 1.000 - - - predicted gene 14878 [Source:MGI Symbol;Acc:MGI:3708100]
60. Zfy1 ENSMUSG00000053211 1 1 - - - - - 1.000 zinc finger protein 1, Y-linked [Source:MGI Symbol;Acc:MGI:99212]
61. Gm26974 ENSMUSG00000098160 1 1 - - 1.000 - - - predicted gene, 26974 [Source:MGI Symbol;Acc:MGI:5504089]
62. Gm13902 ENSMUSG00000084164 1 1 - - 1.000 - - - predicted gene 13902 [Source:MGI Symbol;Acc:MGI:3652326]
63. Lnx1 ENSMUSG00000029228 4 1 - - - 1.000 - - ligand of numb-protein X 1 [Source:MGI Symbol;Acc:MGI:1278335]
64. Gm12781 ENSMUSG00000085923 0 1 - - 1.000 - - - predicted gene 12781 [Source:MGI Symbol;Acc:MGI:3649569]
65. Gm20636 ENSMUSG00000093637 1 1 - - 1.000 - - - predicted gene 20636 [Source:MGI Symbol;Acc:MGI:5313083]
66. Gm7094 ENSMUSG00000096375 13 0.99 - - - 0.990 - - predicted pseudogene 7094 [Source:MGI Symbol;Acc:MGI:3648114]
67. Insc ENSMUSG00000048782 72 0.988 - - - 0.988 - - INSC spindle orientation adaptor protein [Source:MGI Symbol;Acc:MGI:1917942]
68. Tmem181c-ps ENSMUSG00000093880 7 0.984 - - - 0.984 - - transmembrane protein 181C, pseudogene [Source:MGI Symbol;Acc:MGI:3780993]
69. Uchl4 ENSMUSG00000035337 19 0.984 - - - 0.984 - - ubiquitin carboxyl-terminal esterase L4 [Source:MGI Symbol;Acc:MGI:1890440]
70. Gm15912 ENSMUSG00000085881 13 0.98 - - - 0.980 - - predicted gene 15912 [Source:MGI Symbol;Acc:MGI:3801895]
71. Plch2 ENSMUSG00000029055 31 0.978 - - - 0.978 - - phospholipase C, eta 2 [Source:MGI Symbol;Acc:MGI:2443078]
72. Cftr ENSMUSG00000041301 43 0.973 - - - 0.973 - - cystic fibrosis transmembrane conductance regulator [Source:MGI Symbol;Acc:MGI:88388]
73. Apcdd1 ENSMUSG00000071847 18 0.966 - - - 0.966 - - adenomatosis polyposis coli down-regulated 1 [Source:MGI Symbol;Acc:MGI:3513977]
74. 1700123I01Rik 1700123I01Rik 4 0.966 - - - 0.966 - -
75. Mab21l3 ENSMUSG00000044313 17 0.961 - - - 0.961 - - mab-21-like 3 (C. elegans) [Source:MGI Symbol;Acc:MGI:2446273]
76. Gm7598 ENSMUSG00000087390 18 0.95 - - - 0.950 - - predicted gene 7598 [Source:MGI Symbol;Acc:MGI:3644312]
77. Tvp23a ENSMUSG00000050908 4 0.948 - - 0.948 - - - trans-golgi network vesicle protein 23A [Source:MGI Symbol;Acc:MGI:3665441]
78. Ctrl ENSMUSG00000031896 15 0.946 - - - 0.946 - - chymotrypsin-like [Source:MGI Symbol;Acc:MGI:88558]
79. Fam187b ENSMUSG00000046826 18 0.945 - - - - - 0.945 family with sequence similarity 187, member B [Source:MGI Symbol;Acc:MGI:1923665]
80. Gm11671 Gm11671 16 0.937 - - - 0.937 - -
81. Prrt4 ENSMUSG00000079654 149 0.932 - - - 0.932 - - proline-rich transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:2141677]
82. Alms1-ps2 ENSMUSG00000090098 15 0.928 - - - 0.928 - - ALMS1, centrosome and basal body associated, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3779593]
83. 4931415C17Rik ENSMUSG00000054910 33 0.925 - - - 0.925 - - RIKEN cDNA 4931415C17 gene [Source:MGI Symbol;Acc:MGI:1918216]
84. Clca5 Clca5 15 0.924 - - - 0.924 - -
85. Gm14057 ENSMUSG00000089662 29 0.903 - - - 0.903 - - predicted gene 14057 [Source:MGI Symbol;Acc:MGI:3705433]
86. Amz1 ENSMUSG00000050022 17 0.9 - - - 0.900 - - archaelysin family metallopeptidase 1 [Source:MGI Symbol;Acc:MGI:2442258]
87. Trim29 ENSMUSG00000032013 39 0.9 - - - 0.900 - - tripartite motif-containing 29 [Source:MGI Symbol;Acc:MGI:1919419]
88. Gm16139 ENSMUSG00000089861 6 0.895 - - - 0.895 - - predicted gene 16139 [Source:MGI Symbol;Acc:MGI:3801880]
89. Lsmem1 ENSMUSG00000071342 24 0.895 - - - 0.895 - - leucine-rich single-pass membrane protein 1 [Source:MGI Symbol;Acc:MGI:2685735]
90. Fgf5 ENSMUSG00000029337 249 0.881 - - - 0.881 - - fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
91. Tmem52b ENSMUSG00000030160 13 0.878 - - 0.878 - - - transmembrane protein 52B [Source:MGI Symbol;Acc:MGI:2442838]
92. Slc26a6 ENSMUSG00000023259, ENSMUSG00000107138 52 0.874 - - - 0.874 - - solute carrier family 26, member 6 [Source:MGI Symbol;Acc:MGI:2159728]
93. 6430562O15Rik ENSMUSG00000097828 27 0.874 - - - 0.874 - - RIKEN cDNA 6430562O15 gene [Source:MGI Symbol;Acc:MGI:2444982]
94. Gm13504 ENSMUSG00000083686 4 0.873 - - 0.873 - - - predicted gene 13504 [Source:MGI Symbol;Acc:MGI:3650156]
95. Tph1 ENSMUSG00000040046 14 0.859 - - 0.859 - - - tryptophan hydroxylase 1 [Source:MGI Symbol;Acc:MGI:98796]
96. Tmed6 ENSMUSG00000031919 6 0.856 - - 0.856 - - - transmembrane p24 trafficking protein 6 [Source:MGI Symbol;Acc:MGI:1913519]
97. Gm12696 ENSMUSG00000084159 37 0.856 - - - 0.856 - - predicted gene 12696 [Source:MGI Symbol;Acc:MGI:3649288]
98. Hmgb1-ps8 ENSMUSG00000097295 12 0.85 - - - 0.850 - - high mobility group box 1, pseudogene 8 [Source:MGI Symbol;Acc:MGI:96114]
99. Myocd ENSMUSG00000020542 95 0.849 - - - 0.849 - - myocardin [Source:MGI Symbol;Acc:MGI:2137495]
100. Tmem255b ENSMUSG00000038457 21 0.84 - - - 0.840 - - transmembrane protein 255B [Source:MGI Symbol;Acc:MGI:2685533]

There are 121 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA