Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scn3b

Gene Name Gene ID Reads Annotation
Scn3b ENSMUSG00000049281 88 sodium channel, voltage-gated, type III, beta [Source:MGI Symbol;Acc:MGI:1918882]







Genes with expression patterns similar to Scn3b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scn3b ENSMUSG00000049281 88 6 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type III, beta [Source:MGI Symbol;Acc:MGI:1918882]
2. Slc6a1 ENSMUSG00000030310 22 1.611 - 0.840 - 0.771 - - solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:MGI Symbol;Acc:MGI:95627]
3. Nkx2-9 ENSMUSG00000058669 17 1.596 - 0.822 0.774 - - - NK2 homeobox 9 [Source:MGI Symbol;Acc:MGI:1270158]
4. Rasgef1c ENSMUSG00000020374 48 1.483 - - 0.752 - 0.731 - RasGEF domain family, member 1C [Source:MGI Symbol;Acc:MGI:1921813]
5. Olig2 ENSMUSG00000039830 329 1.472 - - 0.765 - - 0.707 oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
6. Disp2 ENSMUSG00000040035 230 1.451 - - 0.702 - - 0.749 dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
7. Mapt ENSMUSG00000018411 1834 1.446 - - - 0.739 - 0.707 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
8. Gm8822 ENSMUSG00000082319 15 1.433 - 0.732 0.701 - - - predicted gene 8822 [Source:MGI Symbol;Acc:MGI:3648640]
9. Cd4 ENSMUSG00000023274 46 0.941 - - 0.941 - - - CD4 antigen [Source:MGI Symbol;Acc:MGI:88335]
10. Gm4793 ENSMUSG00000054412 1 0.938 - - 0.938 - - - predicted gene 4793 [Source:MGI Symbol;Acc:MGI:3646955]
11. Mgl2 ENSMUSG00000040950 9 0.938 - - 0.938 - - - macrophage galactose N-acetyl-galactosamine specific lectin 2 [Source:MGI Symbol;Acc:MGI:2385729]
12. Xirp2 ENSMUSG00000027022 2 0.938 - - 0.938 - - - xin actin-binding repeat containing 2 [Source:MGI Symbol;Acc:MGI:2685198]
13. Agr3 ENSMUSG00000036231 2 0.938 - - 0.938 - - - anterior gradient 3 [Source:MGI Symbol;Acc:MGI:2685734]
14. A630031M04Rik ENSMUSG00000087470 3 0.938 - - 0.938 - - - RIKEN cDNA A630031M04 gene [Source:MGI Symbol;Acc:MGI:2444470]
15. D630032N06Rik D630032N06Rik 10 0.938 - - 0.938 - - -
16. Vsig8 ENSMUSG00000049598 1 0.938 - - 0.938 - - - V-set and immunoglobulin domain containing 8 [Source:MGI Symbol;Acc:MGI:3642995]
17. 4930423O20Rik 4930423O20Rik 6 0.938 - - 0.938 - - -
18. Gm11762 ENSMUSG00000087675 1 0.938 - - 0.938 - - - predicted gene 11762 [Source:MGI Symbol;Acc:MGI:3651277]
19. Gm13182 ENSMUSG00000082580 7 0.938 - - 0.938 - - - predicted gene 13182 [Source:MGI Symbol;Acc:MGI:3650465]
20. Gm18709 ENSMUSG00000097895 2 0.938 - - 0.938 - - - predicted gene, 18709 [Source:MGI Symbol;Acc:MGI:5010894]
21. Prss56 ENSMUSG00000036480 4 0.938 - - 0.938 - - - protease, serine 56 [Source:MGI Symbol;Acc:MGI:1916703]
22. 1700041G16Rik ENSMUSG00000054822 3 0.938 - - 0.938 - - - RIKEN cDNA 1700041G16 gene [Source:MGI Symbol;Acc:MGI:1920549]
23. D030046N08Rik ENSMUSG00000089760 2 0.938 - - 0.938 - - - RIKEN cDNA D030046N08 gene [Source:MGI Symbol;Acc:MGI:3645234]
24. 1700007P06Rik ENSMUSG00000089730 1 0.938 - - 0.938 - - - RIKEN cDNA 1700007P06 gene [Source:MGI Symbol;Acc:MGI:1916558]
25. Gm26744 ENSMUSG00000097401 4 0.938 - - 0.938 - - - predicted gene, 26744 [Source:MGI Symbol;Acc:MGI:5477238]
26. Capn8 ENSMUSG00000038599 1 0.938 - - 0.938 - - - calpain 8 [Source:MGI Symbol;Acc:MGI:2181366]
27. Gm26522 ENSMUSG00000097423 10 0.938 - - 0.938 - - - predicted gene, 26522 [Source:MGI Symbol;Acc:MGI:5477016]
28. Btn1a1 ENSMUSG00000000706 24 0.938 - - 0.938 - - - butyrophilin, subfamily 1, member A1 [Source:MGI Symbol;Acc:MGI:103118]
29. Gm11932 Gm11932 3 0.938 - - 0.938 - - -
30. 4930430J20Rik 4930430J20Rik 1 0.938 - - 0.938 - - -
31. Cnga3 ENSMUSG00000026114 7 0.938 - - 0.938 - - - cyclic nucleotide gated channel alpha 3 [Source:MGI Symbol;Acc:MGI:1341818]
32. Omg ENSMUSG00000049612 4 0.938 - - 0.938 - - - oligodendrocyte myelin glycoprotein [Source:MGI Symbol;Acc:MGI:106586]
33. Dnah17 ENSMUSG00000033987 5 0.938 - - 0.938 - - - dynein, axonemal, heavy chain 17 [Source:MGI Symbol;Acc:MGI:1917176]
34. Gm13393 ENSMUSG00000086519 1 0.938 - - 0.938 - - - predicted gene 13393 [Source:MGI Symbol;Acc:MGI:3649783]
35. Aspdh ENSMUSG00000038704 3 0.938 - - 0.938 - - - aspartate dehydrogenase domain containing [Source:MGI Symbol;Acc:MGI:1915602]
36. 4933433G15Rik ENSMUSG00000097021 1 0.938 - - 0.938 - - - RIKEN cDNA 4933433G15 gene [Source:MGI Symbol;Acc:MGI:1918524]
37. Mobp ENSMUSG00000032517 11 0.936 - - 0.936 - - - myelin-associated oligodendrocytic basic protein [Source:MGI Symbol;Acc:MGI:108511]
38. Piwil1 ENSMUSG00000029423 4 0.934 - - 0.934 - - - piwi-like RNA-mediated gene silencing 1 [Source:MGI Symbol;Acc:MGI:1928897]
39. Lrrc38 ENSMUSG00000028584, ENSMUSG00000097351 7 0.916 - - 0.916 - - - leucine rich repeat containing 38 [Source:MGI Symbol;Acc:MGI:2442845]
40. Rasgef1a ENSMUSG00000030134 2 0.916 - - 0.916 - - - RasGEF domain family, member 1A [Source:MGI Symbol;Acc:MGI:1917977]
41. Vmn1r15 ENSMUSG00000115199 9 0.916 - - 0.916 - - - vomeronasal 1 receptor 15 [Source:MGI Symbol;Acc:MGI:2148527]
42. Cwh43 ENSMUSG00000029154 6 0.916 - - 0.916 - - - cell wall biogenesis 43 C-terminal homolog [Source:MGI Symbol;Acc:MGI:2444131]
43. Ttc16 ENSMUSG00000039021 4 0.916 - - 0.916 - - - tetratricopeptide repeat domain 16 [Source:MGI Symbol;Acc:MGI:2443048]
44. D5Ertd577e ENSMUSG00000070677 7 0.916 - - 0.916 - - - DNA segment, Chr 5, ERATO Doi 577, expressed [Source:MGI Symbol;Acc:MGI:1261918]
45. Hmgb1-ps8 ENSMUSG00000097295 12 0.902 - - 0.902 - - - high mobility group box 1, pseudogene 8 [Source:MGI Symbol;Acc:MGI:96114]
46. Elfn1 ENSMUSG00000048988 34 0.901 - - 0.901 - - - leucine rich repeat and fibronectin type III, extracellular 1 [Source:MGI Symbol;Acc:MGI:2442479]
47. Musk ENSMUSG00000057280 3 0.901 - - 0.901 - - - muscle, skeletal, receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:103581]
48. Zmynd10 ENSMUSG00000010044 3 0.886 - - 0.886 - - - zinc finger, MYND domain containing 10 [Source:MGI Symbol;Acc:MGI:2387863]
49. Gm15559 ENSMUSG00000086401 9 0.875 - - 0.875 - - - predicted gene 15559 [Source:MGI Symbol;Acc:MGI:3783008]
50. Gm20731 ENSMUSG00000102912 41 0.874 - - 0.874 - - - predicted gene, 20731 [Source:MGI Symbol;Acc:MGI:5313040]
51. Ptpro ENSMUSG00000030223 65 0.872 - - 0.872 - - - protein tyrosine phosphatase, receptor type, O [Source:MGI Symbol;Acc:MGI:1097152]
52. Hrk ENSMUSG00000046607 35 0.869 - - 0.869 - - - harakiri, BCL2 interacting protein (contains only BH3 domain) [Source:MGI Symbol;Acc:MGI:1201608]
53. Gm17244 ENSMUSG00000102997 14 0.869 - - 0.869 - - - predicted gene, 17244 [Source:MGI Symbol;Acc:MGI:4936878]
54. Saa3 ENSMUSG00000040026 9 0.869 - - 0.869 - - - serum amyloid A 3 [Source:MGI Symbol;Acc:MGI:98223]
55. Olig1 ENSMUSG00000046160 18 0.867 - - 0.867 - - - oligodendrocyte transcription factor 1 [Source:MGI Symbol;Acc:MGI:1355334]
56. Gm17084 ENSMUSG00000091462 24 0.865 - - 0.865 - - - predicted gene 17084 [Source:MGI Symbol;Acc:MGI:4937911]
57. AW047730 ENSMUSG00000097428 42 0.863 - - 0.863 - - - expressed sequence AW047730 [Source:MGI Symbol;Acc:MGI:2139951]
58. RP23-296I6.9 RP23-296I6.9 3 0.863 - - 0.863 - - -
59. Adcyap1 ENSMUSG00000024256 107 0.856 - - 0.856 - - - adenylate cyclase activating polypeptide 1 [Source:MGI Symbol;Acc:MGI:105094]
60. Nkpd1 ENSMUSG00000060621 2 0.856 - - 0.856 - - - NTPase, KAP family P-loop domain containing 1 [Source:MGI Symbol;Acc:MGI:1916797]
61. Capns2 ENSMUSG00000078144 1 0.856 - - 0.856 - - - calpain, small subunit 2 [Source:MGI Symbol;Acc:MGI:1916793]
62. A430105I19Rik 8 0.856 - - 0.856 - - - RIKEN cDNA A430105I19 gene, transcript variant X2
63. Ccdc24 ENSMUSG00000078588 8 0.856 - - 0.856 - - - coiled-coil domain containing 24 [Source:MGI Symbol;Acc:MGI:2685874]
64. Wdr72 ENSMUSG00000044976 12 0.854 - - 0.854 - - - WD repeat domain 72 [Source:MGI Symbol;Acc:MGI:3583957]
65. Gm24545 ENSMUSG00000089276 38 0.853 - - 0.853 - - - predicted gene, 24545 [Source:MGI Symbol;Acc:MGI:5454322]
66. Ggn ENSMUSG00000031493 13 0.85 - - 0.850 - - - gametogenetin [Source:MGI Symbol;Acc:MGI:2181461]
67. Nphs2 ENSMUSG00000026602 1 0.845 0.845 - - - - - nephrosis 2, podocin [Source:MGI Symbol;Acc:MGI:2157018]
68. Gm26531 ENSMUSG00000097902 9 0.845 0.845 - - - - - predicted gene, 26531 [Source:MGI Symbol;Acc:MGI:5477025]
69. Ms4a4d ENSMUSG00000024678 17 0.845 0.845 - - - - - membrane-spanning 4-domains, subfamily A, member 4D [Source:MGI Symbol;Acc:MGI:1913857]
70. Ces2g ENSMUSG00000031877 1 0.845 0.845 - - - - - carboxylesterase 2G [Source:MGI Symbol;Acc:MGI:1919611]
71. Plin5 ENSMUSG00000011305 3 0.845 0.845 - - - - - perilipin 5 [Source:MGI Symbol;Acc:MGI:1914218]
72. Prss34 ENSMUSG00000056399 33 0.845 0.845 - - - - - protease, serine 34 [Source:MGI Symbol;Acc:MGI:2681414]
73. Spef2 ENSMUSG00000072663 6 0.845 0.845 - - - - - sperm flagellar 2 [Source:MGI Symbol;Acc:MGI:2443727]
74. Gm15302 ENSMUSG00000084377 8 0.845 0.845 - - - - - predicted gene 15302 [Source:MGI Symbol;Acc:MGI:3705638]
75. Nxpe5 ENSMUSG00000047592 11 0.845 0.845 - - - - - neurexophilin and PC-esterase domain family, member 5 [Source:MGI Symbol;Acc:MGI:3584036]
76. 2610316D01Rik ENSMUSG00000097040 36 0.845 0.845 - - - - - RIKEN cDNA 2610316D01 gene [Source:MGI Symbol;Acc:MGI:1919761]
77. Gm17511 ENSMUSG00000090460 2 0.845 0.845 - - - - - predicted gene, 17511 [Source:MGI Symbol;Acc:MGI:4937145]
78. Hist2h3c2 ENSMUSG00000081058 12 0.845 0.845 - - - - - histone cluster 2, H3c2 [Source:MGI Symbol;Acc:MGI:2448357]
79. D230022J07Rik ENSMUSG00000087176 5 0.845 0.845 - - - - - RIKEN cDNA D230022J07 gene [Source:MGI Symbol;Acc:MGI:2444095]
80. Arhgap22 ENSMUSG00000063506 2 0.845 0.845 - - - - - Rho GTPase activating protein 22 [Source:MGI Symbol;Acc:MGI:2443418]
81. 9530080O11Rik ENSMUSG00000044125 2 0.845 0.845 - - - - - RIKEN cDNA 9530080O11 gene [Source:MGI Symbol;Acc:MGI:2441751]
82. Nrap ENSMUSG00000049134 1 0.845 0.845 - - - - - nebulin-related anchoring protein [Source:MGI Symbol;Acc:MGI:1098765]
83. Gm22435 ENSMUSG00000089177 2 0.845 0.845 - - - - - predicted gene, 22435 [Source:MGI Symbol;Acc:MGI:5452212]
84. R3hdml ENSMUSG00000078949 4 0.845 0.845 - - - - - R3H domain containing-like [Source:MGI Symbol;Acc:MGI:3650937]
85. Gm12631 ENSMUSG00000084809 2 0.845 0.845 - - - - - predicted gene 12631 [Source:MGI Symbol;Acc:MGI:3650969]
86. Gm23783 ENSMUSG00000088566 1 0.845 0.845 - - - - - predicted gene, 23783 [Source:MGI Symbol;Acc:MGI:5453560]
87. Gm12488 ENSMUSG00000082000 3 0.845 0.845 - - - - - predicted gene 12488 [Source:MGI Symbol;Acc:MGI:3650947]
88. Wibg Wibg 2 0.845 0.845 - - - - -
89. Gm20512 ENSMUSG00000092381 1 0.845 0.845 - - - - - predicted gene 20512 [Source:MGI Symbol;Acc:MGI:5141977]
90. Krt13 ENSMUSG00000044041 8 0.845 0.845 - - - - - keratin 13 [Source:MGI Symbol;Acc:MGI:101925]
91. Atp1b4 ENSMUSG00000016327 10 0.845 0.845 - - - - - ATPase, (Na+)/K+ transporting, beta 4 polypeptide [Source:MGI Symbol;Acc:MGI:1915071]
92. Gm23158 ENSMUSG00000093886 1 0.845 0.845 - - - - - predicted gene, 23158 [Source:MGI Symbol;Acc:MGI:5452935]
93. Ankrd35 ENSMUSG00000038354 5 0.845 0.845 - - - - - ankyrin repeat domain 35 [Source:MGI Symbol;Acc:MGI:2442590]
94. Mir1949 ENSMUSG00000088059, ENSMUSG00000105743 2 0.845 0.845 - - - - - microRNA 1949 [Source:MGI Symbol;Acc:MGI:3837022]
95. AI115009 ENSMUSG00000097745 6 0.845 0.845 - - - - - expressed sequence AI115009 [Source:MGI Symbol;Acc:MGI:2139623]
96. Cd300lf ENSMUSG00000047798 4 0.845 0.845 - - - - - CD300 molecule like family member F [Source:MGI Symbol;Acc:MGI:2442359]
97. Myh7b ENSMUSG00000074652 24 0.845 0.845 - - - - - myosin, heavy chain 7B, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:3710243]
98. Gm15743 ENSMUSG00000086645 5 0.845 0.845 - - - - - predicted gene 15743 [Source:MGI Symbol;Acc:MGI:3783185]
99. Edar ENSMUSG00000003227 5 0.845 0.845 - - - - - ectodysplasin-A receptor [Source:MGI Symbol;Acc:MGI:1343498]
100. 1700058P15Rik ENSMUSG00000089636 4 0.845 0.845 - - - - - RIKEN cDNA 1700058P15 gene [Source:MGI Symbol;Acc:MGI:1920627]

There are 154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA