Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scn11a

Gene Name Gene ID Reads Annotation
Scn11a ENSMUSG00000034115 6 sodium channel, voltage-gated, type XI, alpha [Source:MGI Symbol;Acc:MGI:1345149]







Genes with expression patterns similar to Scn11a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scn11a ENSMUSG00000034115 6 5 1.000 - 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type XI, alpha [Source:MGI Symbol;Acc:MGI:1345149]
2. 4930481B07Rik ENSMUSG00000085956 13 1.703 - - 0.874 - - 0.829 RIKEN cDNA 4930481B07 gene [Source:MGI Symbol;Acc:MGI:1922187]
3. 5033403F01Rik ENSMUSG00000096932 4 1.555 0.846 - - - - 0.709 RIKEN cDNA 5033403F01 gene [Source:MGI Symbol;Acc:MGI:1923208]
4. Gnat3 ENSMUSG00000028777 6 1 - - - - 1.000 - guanine nucleotide binding protein, alpha transducing 3 [Source:MGI Symbol;Acc:MGI:3588268]
5. Csta Csta 0 1 - - - - 1.000 -
6. A530088E08Rik 2 1 - - - - - 1.000 RIKEN cDNA A530088E08 gene
7. Dnah5 ENSMUSG00000022262 9 1 - - - - 1.000 - dynein, axonemal, heavy chain 5 [Source:MGI Symbol;Acc:MGI:107718]
8. Sun3 ENSMUSG00000040985 3 1 - - - - 1.000 - Sad1 and UNC84 domain containing 3 [Source:MGI Symbol;Acc:MGI:3041199]
9. Ccdc67 3 1 - - - - 1.000 - coiled-coil domain containing 67, transcript variant X8
10. Gm13642 ENSMUSG00000086846 1 1 - - - - 1.000 - predicted gene 13642 [Source:MGI Symbol;Acc:MGI:3651865]
11. Gm5859 ENSMUSG00000073879 0 1 - - - - 1.000 - predicted pseudogene 5859 [Source:MGI Symbol;Acc:MGI:3704096]
12. Gm25313 ENSMUSG00000095738 7 1 - - - - - 1.000 predicted gene, 25313 [Source:MGI Symbol;Acc:MGI:5455090]
13. Tesc ENSMUSG00000029359 6 1 - - - - - 1.000 tescalcin [Source:MGI Symbol;Acc:MGI:1930803]
14. 4930451C15Rik 4930451C15Rik 12 1 - - - - - 1.000
15. Crygb ENSMUSG00000073658 1 1 - - - - - 1.000 crystallin, gamma B [Source:MGI Symbol;Acc:MGI:88522]
16. B230323A14Rik ENSMUSG00000097623 6 1 - - - - 1.000 - RIKEN cDNA B230323A14 gene [Source:MGI Symbol;Acc:MGI:2443084]
17. Gm26678 ENSMUSG00000097599 6 1 - - - - - 1.000 predicted gene, 26678 [Source:MGI Symbol;Acc:MGI:5477172]
18. Arhgap40 ENSMUSG00000074625 0 1 - - - - 1.000 - Rho GTPase activating protein 40 [Source:MGI Symbol;Acc:MGI:3649852]
19. Gm12224 ENSMUSG00000085888 7 1 - - - - 1.000 - predicted gene 12224 [Source:MGI Symbol;Acc:MGI:3651369]
20. Gm12716 ENSMUSG00000081584 9 1 - - - 1.000 - - predicted gene 12716 [Source:MGI Symbol;Acc:MGI:3650738]
21. Anxa10 ENSMUSG00000031635 2 1 - - - - - 1.000 annexin A10 [Source:MGI Symbol;Acc:MGI:1347090]
22. Lif ENSMUSG00000034394 1 1 - - - - - 1.000 leukemia inhibitory factor [Source:MGI Symbol;Acc:MGI:96787]
23. Hao1 ENSMUSG00000027261 2 1 - - - - 1.000 - hydroxyacid oxidase 1, liver [Source:MGI Symbol;Acc:MGI:96011]
24. Gm15731 ENSMUSG00000086528 4 1 - - - - - 1.000 predicted gene 15731 [Source:MGI Symbol;Acc:MGI:3783174]
25. Gm12939 ENSMUSG00000081609 2 1 - - - 1.000 - - predicted gene 12939 [Source:MGI Symbol;Acc:MGI:3652092]
26. Gm11557 ENSMUSG00000082900 5 1 - - - - 1.000 - predicted gene 11557 [Source:MGI Symbol;Acc:MGI:3651826]
27. RP23-296I6.9 RP23-296I6.9 3 1 - - - - - 1.000
28. Rps12-ps1 ENSMUSG00000082746 6 1 - - - - 1.000 - ribosomal protein S12, pseudogene 1 [Source:MGI Symbol;Acc:MGI:1353638]
29. Gm20706 ENSMUSG00000093580 2 1 - - - 1.000 - - predicted gene 20706 [Source:MGI Symbol;Acc:MGI:5313153]
30. Gm15179 ENSMUSG00000085653 2 1 - - - - 1.000 - predicted gene 15179 [Source:MGI Symbol;Acc:MGI:3705125]
31. Cryge ENSMUSG00000070870 4 1 - - - - 1.000 - crystallin, gamma E [Source:MGI Symbol;Acc:MGI:88525]
32. Gm13999 ENSMUSG00000087458 3 1 - - - - - 1.000 predicted gene 13999 [Source:MGI Symbol;Acc:MGI:3651905]
33. Gm17709 ENSMUSG00000091952 2 1 - - - 1.000 - - predicted gene, 17709 [Source:MGI Symbol;Acc:MGI:4937343]
34. Gpr119 ENSMUSG00000051209 3 1 - - - 1.000 - - G-protein coupled receptor 119 [Source:MGI Symbol;Acc:MGI:2668412]
35. 4921501E09Rik ENSMUSG00000023350 2 1 - - - 1.000 - - RIKEN cDNA 4921501E09 gene [Source:MGI Symbol;Acc:MGI:1921292]
36. Pnp2 ENSMUSG00000068417 5 1 - - - - 1.000 - purine-nucleoside phosphorylase 2 [Source:MGI Symbol;Acc:MGI:3712328]
37. Krt4 ENSMUSG00000059668 5 1 - - - 1.000 - - keratin 4 [Source:MGI Symbol;Acc:MGI:96701]
38. 1700080N15Rik ENSMUSG00000084859 0 1 - - - - 1.000 - RIKEN cDNA 1700080N15 gene [Source:MGI Symbol;Acc:MGI:1920739]
39. Rhox2g ENSMUSG00000079629 2 1 - - - - - 1.000 reproductive homeobox 2G [Source:MGI Symbol;Acc:MGI:3648776]
40. Gm20442 ENSMUSG00000092600 3 1 - - - - 1.000 - predicted gene 20442 [Source:MGI Symbol;Acc:MGI:5141907]
41. Gm12051 ENSMUSG00000085021 1 1 - - - - - 1.000 predicted gene 12051 [Source:MGI Symbol;Acc:MGI:3652078]
42. Cnga2 ENSMUSG00000005864 8 1 - - - 1.000 - - cyclic nucleotide gated channel alpha 2 [Source:MGI Symbol;Acc:MGI:108040]
43. Gm14454 Gm14454 1 1 - - - - - 1.000
44. Gm22304 ENSMUSG00000064622 0 1 - - - - 1.000 - predicted gene, 22304 [Source:MGI Symbol;Acc:MGI:5452081]
45. Gm13216 ENSMUSG00000082013 3 1 - - - 1.000 - - predicted gene 13216 [Source:MGI Symbol;Acc:MGI:3651709]
46. AV039307 ENSMUSG00000087519 4 1 - - - - 1.000 - expressed sequence AV039307 [Source:MGI Symbol;Acc:MGI:2139243]
47. Gm13344 ENSMUSG00000087103 10 1 - - - 1.000 - - predicted gene 13344 [Source:MGI Symbol;Acc:MGI:3649239]
48. Olfr99 ENSMUSG00000061972 1 1 - - - - - 1.000 olfactory receptor 99 [Source:MGI Symbol;Acc:MGI:2177482]
49. Gm6434 ENSMUSG00000091233 4 1 - - - - - 1.000 predicted gene 6434 [Source:MGI Symbol;Acc:MGI:3648424]
50. Olfr1384 ENSMUSG00000044170 1 1 - - - - 1.000 - olfactory receptor 1384 [Source:MGI Symbol;Acc:MGI:3031218]
51. Gm13204 ENSMUSG00000082860 4 1 - - - 1.000 - - predicted gene 13204 [Source:MGI Symbol;Acc:MGI:3651444]
52. Mettl7b ENSMUSG00000025347 1 1 - - - - - 1.000 methyltransferase like 7B [Source:MGI Symbol;Acc:MGI:1918914]
53. Ighv1-83 ENSMUSG00000105757 1 1 - - - - 1.000 - immunoglobulin heavy variable 1-83 [Source:MGI Symbol;Acc:MGI:3648939]
54. Trhr ENSMUSG00000038760 1 1 - - - - 1.000 - thyrotropin releasing hormone receptor [Source:MGI Symbol;Acc:MGI:98824]
55. Gm10558 ENSMUSG00000073656 1 1 - - - - 1.000 - predicted gene 10558 [Source:MGI Symbol;Acc:MGI:3642906]
56. 1700034J05Rik ENSMUSG00000040163 1 1 - - - - - 1.000 RIKEN cDNA 1700034J05 gene [Source:MGI Symbol;Acc:MGI:1920594]
57. Gm27027 ENSMUSG00000098004 1 1 - - - - 1.000 - predicted gene, 27027 [Source:MGI Symbol;Acc:MGI:5504142]
58. D6Ertd474e ENSMUSG00000072679 0 1 - - - - 1.000 - DNA segment, Chr 6, ERATO Doi 474, expressed [Source:MGI Symbol;Acc:MGI:1196315]
59. Oc90 ENSMUSG00000015001 0 1 - - - - 1.000 - otoconin 90 [Source:MGI Symbol;Acc:MGI:1313269]
60. Mir1949 ENSMUSG00000088059, ENSMUSG00000105743 2 1 - - - - - 1.000 microRNA 1949 [Source:MGI Symbol;Acc:MGI:3837022]
61. Gm10566 ENSMUSG00000073737 1 1 - - - - 1.000 - predicted gene 10566 [Source:MGI Symbol;Acc:MGI:3642220]
62. Gm11425 ENSMUSG00000082419, ENSMUSG00000116156 6 1 - - - 1.000 - - predicted gene 11425 [Source:MGI Symbol;Acc:MGI:3650957]
63. Gm25060 ENSMUSG00000087999 1 1 - - - - - 1.000 predicted gene, 25060 [Source:MGI Symbol;Acc:MGI:5454837]
64. Tigd4 ENSMUSG00000047819 2 1 - - - - 1.000 - tigger transposable element derived 4 [Source:MGI Symbol;Acc:MGI:2685264]
65. P2rx6 ENSMUSG00000022758 13 1 - - - - - 1.000 purinergic receptor P2X, ligand-gated ion channel, 6 [Source:MGI Symbol;Acc:MGI:1337113]
66. Gm15163 ENSMUSG00000085711 4 1 - - - 1.000 - - predicted gene 15163 [Source:MGI Symbol;Acc:MGI:3642430]
67. Gm16894 ENSMUSG00000097899 4 1 - - - - - 1.000 predicted gene, 16894 [Source:MGI Symbol;Acc:MGI:4439818]
68. Gm12611 ENSMUSG00000081578 1 1 - - - - - 1.000 predicted gene 12611 [Source:MGI Symbol;Acc:MGI:3650135]
69. Gm23502 ENSMUSG00000065836 1 1 - - - - 1.000 - predicted gene, 23502 [Source:MGI Symbol;Acc:MGI:5453279]
70. Gm7206 ENSMUSG00000082475 7 1 - - - - 1.000 - predicted pseudogene 7206 [Source:MGI Symbol;Acc:MGI:3646634]
71. Ect2l ENSMUSG00000071392 1 1 - - - - 1.000 - epithelial cell transforming sequence 2 oncogene-like [Source:MGI Symbol;Acc:MGI:3641723]
72. Gm11906 ENSMUSG00000085885 0 1 - - - - 1.000 - predicted gene 11906 [Source:MGI Symbol;Acc:MGI:3705114]
73. Mmp3 ENSMUSG00000043613 0 1 - - - - 1.000 - matrix metallopeptidase 3 [Source:MGI Symbol;Acc:MGI:97010]
74. 3100003L05Rik ENSMUSG00000086254 0 1 - - - - 1.000 - RIKEN cDNA 3100003L05 gene [Source:MGI Symbol;Acc:MGI:1920326]
75. AY702103 ENSMUSG00000067103 4 1 - - - 1.000 - - cDNA sequence AY702103 [Source:MGI Symbol;Acc:MGI:3525105]
76. Gm16477 ENSMUSG00000062758 4 1 - - - - - 1.000 predicted pseudogene 16477 [Source:MGI Symbol;Acc:MGI:3646779]
77. Cntnap5a ENSMUSG00000070695 8 1 - - - - - 1.000 contactin associated protein-like 5A [Source:MGI Symbol;Acc:MGI:3643623]
78. Axdnd1 ENSMUSG00000026601 11 1 - - - - 1.000 - axonemal dynein light chain domain containing 1 [Source:MGI Symbol;Acc:MGI:1924602]
79. Fasl ENSMUSG00000000817 4 1 - - - - 1.000 - Fas ligand (TNF superfamily, member 6) [Source:MGI Symbol;Acc:MGI:99255]
80. 4930524L23Rik 4930524L23Rik 18 1 - - - 1.000 - -
81. Adap1 ENSMUSG00000056413 23 1 - - - - 1.000 - ArfGAP with dual PH domains 1 [Source:MGI Symbol;Acc:MGI:2442201]
82. Gm12835 Gm12835 1 1 - - - - 1.000 -
83. Tex38 ENSMUSG00000044556 11 1 - - - - 1.000 - testis expressed 38 [Source:MGI Symbol;Acc:MGI:1922423]
84. Hmgn2-ps1 ENSMUSG00000079067 1 1 - - - - - 1.000 high mobility group nucleosomal binding domain 2, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3783162]
85. Olfr1043 ENSMUSG00000075201 2 1 - - - 1.000 - - olfactory receptor 1043 [Source:MGI Symbol;Acc:MGI:3030877]
86. Spats1 ENSMUSG00000023935 4 1 - - - 1.000 - - spermatogenesis associated, serine-rich 1 [Source:MGI Symbol;Acc:MGI:1918270]
87. Gm13416 ENSMUSG00000084241 3 1 - - - - 1.000 - predicted gene 13416 [Source:MGI Symbol;Acc:MGI:3652158]
88. Gm16241 Gm16241 10 1 - - - - - 1.000
89. Hephl1 ENSMUSG00000031936 1 1 - - - - - 1.000 hephaestin-like 1 [Source:MGI Symbol;Acc:MGI:2685355]
90. Crygd ENSMUSG00000067299 3 1 - - - - 1.000 - crystallin, gamma D [Source:MGI Symbol;Acc:MGI:88524]
91. Gm11229 ENSMUSG00000082017 2 1 - - - - - 1.000 predicted gene 11229 [Source:MGI Symbol;Acc:MGI:3651948]
92. Gm13857 ENSMUSG00000084965 3 1 - - - - - 1.000 predicted gene 13857 [Source:MGI Symbol;Acc:MGI:3649688]
93. Gm12383 ENSMUSG00000082238 1 1 - - - - - 1.000 predicted gene 12383 [Source:MGI Symbol;Acc:MGI:3651852]
94. Pcnxl2 Pcnxl2 7 1 - - - - 1.000 -
95. Gm13710 ENSMUSG00000087362 7 1 - - - - 1.000 - predicted gene 13710 [Source:MGI Symbol;Acc:MGI:3650894]
96. Efhd1 ENSMUSG00000026255 4 1 - - - - 1.000 - EF hand domain containing 1 [Source:MGI Symbol;Acc:MGI:1921607]
97. Gm25791 ENSMUSG00000065226 1 1 - - - - 1.000 - predicted gene, 25791 [Source:MGI Symbol;Acc:MGI:5455568]
98. Etnppl ENSMUSG00000019232 3 1 - - - 1.000 - - ethanolamine phosphate phospholyase [Source:MGI Symbol;Acc:MGI:1919010]
99. Gm26560 ENSMUSG00000097029 0 1 - - - - 1.000 - predicted gene, 26560 [Source:MGI Symbol;Acc:MGI:5477054]
100. 4930404A10Rik 4930404A10Rik 3 1 - - - 1.000 - -

There are 263 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA