Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scn11a

Gene Name Gene ID Reads Annotation
Scn11a ENSMUSG00000034115 6 sodium channel, voltage-gated, type XI, alpha [Source:MGI Symbol;Acc:MGI:1345149]







Genes with expression patterns similar to Scn11a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scn11a ENSMUSG00000034115 6 5 1.000 - 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type XI, alpha [Source:MGI Symbol;Acc:MGI:1345149]
2. 4930481B07Rik ENSMUSG00000085956 13 1.703 - - 0.874 - - 0.829 RIKEN cDNA 4930481B07 gene [Source:MGI Symbol;Acc:MGI:1922187]
3. 5033403F01Rik ENSMUSG00000096932 4 1.555 0.846 - - - - 0.709 RIKEN cDNA 5033403F01 gene [Source:MGI Symbol;Acc:MGI:1923208]
4. Hmgn2-ps1 ENSMUSG00000079067 1 1 - - - - - 1.000 high mobility group nucleosomal binding domain 2, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3783162]
5. Gm13416 ENSMUSG00000084241 3 1 - - - - 1.000 - predicted gene 13416 [Source:MGI Symbol;Acc:MGI:3652158]
6. Spats1 ENSMUSG00000023935 4 1 - - - 1.000 - - spermatogenesis associated, serine-rich 1 [Source:MGI Symbol;Acc:MGI:1918270]
7. Olfr1043 ENSMUSG00000075201 2 1 - - - 1.000 - - olfactory receptor 1043 [Source:MGI Symbol;Acc:MGI:3030877]
8. Gm16241 Gm16241 10 1 - - - - - 1.000
9. Hephl1 ENSMUSG00000031936 1 1 - - - - - 1.000 hephaestin-like 1 [Source:MGI Symbol;Acc:MGI:2685355]
10. Crygd ENSMUSG00000067299 3 1 - - - - 1.000 - crystallin, gamma D [Source:MGI Symbol;Acc:MGI:88524]
11. Axdnd1 ENSMUSG00000026601 11 1 - - - - 1.000 - axonemal dynein light chain domain containing 1 [Source:MGI Symbol;Acc:MGI:1924602]
12. Fasl ENSMUSG00000000817 4 1 - - - - 1.000 - Fas ligand (TNF superfamily, member 6) [Source:MGI Symbol;Acc:MGI:99255]
13. Adap1 ENSMUSG00000056413 23 1 - - - - 1.000 - ArfGAP with dual PH domains 1 [Source:MGI Symbol;Acc:MGI:2442201]
14. 4930524L23Rik 4930524L23Rik 18 1 - - - 1.000 - -
15. Gm12835 Gm12835 1 1 - - - - 1.000 -
16. Tex38 ENSMUSG00000044556 11 1 - - - - 1.000 - testis expressed 38 [Source:MGI Symbol;Acc:MGI:1922423]
17. Gm11906 ENSMUSG00000085885 0 1 - - - - 1.000 - predicted gene 11906 [Source:MGI Symbol;Acc:MGI:3705114]
18. 3100003L05Rik ENSMUSG00000086254 0 1 - - - - 1.000 - RIKEN cDNA 3100003L05 gene [Source:MGI Symbol;Acc:MGI:1920326]
19. AY702103 ENSMUSG00000067103 4 1 - - - 1.000 - - cDNA sequence AY702103 [Source:MGI Symbol;Acc:MGI:3525105]
20. Mmp3 ENSMUSG00000043613 0 1 - - - - 1.000 - matrix metallopeptidase 3 [Source:MGI Symbol;Acc:MGI:97010]
21. Gm16477 ENSMUSG00000062758 4 1 - - - - - 1.000 predicted pseudogene 16477 [Source:MGI Symbol;Acc:MGI:3646779]
22. Cntnap5a ENSMUSG00000070695 8 1 - - - - - 1.000 contactin associated protein-like 5A [Source:MGI Symbol;Acc:MGI:3643623]
23. Gm11425 ENSMUSG00000082419, ENSMUSG00000116156 6 1 - - - 1.000 - - predicted gene 11425 [Source:MGI Symbol;Acc:MGI:3650957]
24. Gm25060 ENSMUSG00000087999 1 1 - - - - - 1.000 predicted gene, 25060 [Source:MGI Symbol;Acc:MGI:5454837]
25. Gm7206 ENSMUSG00000082475 7 1 - - - - 1.000 - predicted pseudogene 7206 [Source:MGI Symbol;Acc:MGI:3646634]
26. Tigd4 ENSMUSG00000047819 2 1 - - - - 1.000 - tigger transposable element derived 4 [Source:MGI Symbol;Acc:MGI:2685264]
27. Gm12611 ENSMUSG00000081578 1 1 - - - - - 1.000 predicted gene 12611 [Source:MGI Symbol;Acc:MGI:3650135]
28. Gm23502 ENSMUSG00000065836 1 1 - - - - 1.000 - predicted gene, 23502 [Source:MGI Symbol;Acc:MGI:5453279]
29. P2rx6 ENSMUSG00000022758 13 1 - - - - - 1.000 purinergic receptor P2X, ligand-gated ion channel, 6 [Source:MGI Symbol;Acc:MGI:1337113]
30. Gm16894 ENSMUSG00000097899 4 1 - - - - - 1.000 predicted gene, 16894 [Source:MGI Symbol;Acc:MGI:4439818]
31. Gm15163 ENSMUSG00000085711 4 1 - - - 1.000 - - predicted gene 15163 [Source:MGI Symbol;Acc:MGI:3642430]
32. Ect2l ENSMUSG00000071392 1 1 - - - - 1.000 - epithelial cell transforming sequence 2 oncogene-like [Source:MGI Symbol;Acc:MGI:3641723]
33. Gm12583 ENSMUSG00000082878 23 1 - - - - - 1.000 predicted gene 12583 [Source:MGI Symbol;Acc:MGI:3651485]
34. Gm11984 ENSMUSG00000082333 1 1 - - - - 1.000 - predicted gene 11984 [Source:MGI Symbol;Acc:MGI:3650611]
35. Slamf1 ENSMUSG00000015316 11 1 - - - - 1.000 - signaling lymphocytic activation molecule family member 1 [Source:MGI Symbol;Acc:MGI:1351314]
36. Gm13583 ENSMUSG00000086578 10 1 - - - - 1.000 - predicted gene 13583 [Source:MGI Symbol;Acc:MGI:3650462]
37. Cyp2r1 ENSMUSG00000030670 7 1 - - - - - 1.000 cytochrome P450, family 2, subfamily r, polypeptide 1 [Source:MGI Symbol;Acc:MGI:2449771]
38. 1700014D04Rik ENSMUSG00000051054 2 1 - - - 1.000 - - RIKEN cDNA 1700014D04 gene [Source:MGI Symbol;Acc:MGI:1921474]
39. Adam5 ENSMUSG00000031554 2 1 - - - - 1.000 - a disintegrin and metallopeptidase domain 5 [Source:MGI Symbol;Acc:MGI:104730]
40. Mug1 ENSMUSG00000059908 5 1 - - - 1.000 - - murinoglobulin 1 [Source:MGI Symbol;Acc:MGI:99837]
41. Gm15590 ENSMUSG00000058542 2 1 - - - - 1.000 - predicted gene 15590 [Source:MGI Symbol;Acc:MGI:3831433]
42. Pkd1l3 ENSMUSG00000048827 3 1 - - - - - 1.000 polycystic kidney disease 1 like 3 [Source:MGI Symbol;Acc:MGI:2664670]
43. Gm5622 ENSMUSG00000079244 2 1 - - - - - 1.000 predicted gene 5622 [Source:MGI Symbol;Acc:MGI:3646060]
44. Gm26560 ENSMUSG00000097029 0 1 - - - - 1.000 - predicted gene, 26560 [Source:MGI Symbol;Acc:MGI:5477054]
45. 4930404A10Rik 4930404A10Rik 3 1 - - - 1.000 - -
46. 4930431P03Rik ENSMUSG00000075042 3 1 - - - 1.000 - - RIKEN cDNA 4930431P03 gene [Source:MGI Symbol;Acc:MGI:1921145]
47. Gm26566 ENSMUSG00000097078 6 1 - - - - - 1.000 predicted gene, 26566 [Source:MGI Symbol;Acc:MGI:5477060]
48. Gm5873 ENSMUSG00000093651 1 1 - - - - 1.000 - predicted gene 5873 [Source:MGI Symbol;Acc:MGI:3648385]
49. Gm15680 ENSMUSG00000090116 3 1 - - - - 1.000 - predicted gene 15680 [Source:MGI Symbol;Acc:MGI:3783122]
50. Obox6 ENSMUSG00000041583 5 1 - - - - 1.000 - oocyte specific homeobox 6 [Source:MGI Symbol;Acc:MGI:2149036]
51. Gm4852 ENSMUSG00000081185 4 1 - - - - 1.000 - predicted pseudogene 4852 [Source:MGI Symbol;Acc:MGI:3643039]
52. Gm11229 ENSMUSG00000082017 2 1 - - - - - 1.000 predicted gene 11229 [Source:MGI Symbol;Acc:MGI:3651948]
53. Gm13857 ENSMUSG00000084965 3 1 - - - - - 1.000 predicted gene 13857 [Source:MGI Symbol;Acc:MGI:3649688]
54. Gm13710 ENSMUSG00000087362 7 1 - - - - 1.000 - predicted gene 13710 [Source:MGI Symbol;Acc:MGI:3650894]
55. Pcnxl2 Pcnxl2 7 1 - - - - 1.000 -
56. Gm12383 ENSMUSG00000082238 1 1 - - - - - 1.000 predicted gene 12383 [Source:MGI Symbol;Acc:MGI:3651852]
57. Efhd1 ENSMUSG00000026255 4 1 - - - - 1.000 - EF hand domain containing 1 [Source:MGI Symbol;Acc:MGI:1921607]
58. Etnppl ENSMUSG00000019232 3 1 - - - 1.000 - - ethanolamine phosphate phospholyase [Source:MGI Symbol;Acc:MGI:1919010]
59. Gm25791 ENSMUSG00000065226 1 1 - - - - 1.000 - predicted gene, 25791 [Source:MGI Symbol;Acc:MGI:5455568]
60. Lif ENSMUSG00000034394 1 1 - - - - - 1.000 leukemia inhibitory factor [Source:MGI Symbol;Acc:MGI:96787]
61. Gm15731 ENSMUSG00000086528 4 1 - - - - - 1.000 predicted gene 15731 [Source:MGI Symbol;Acc:MGI:3783174]
62. Hao1 ENSMUSG00000027261 2 1 - - - - 1.000 - hydroxyacid oxidase 1, liver [Source:MGI Symbol;Acc:MGI:96011]
63. Gm11557 ENSMUSG00000082900 5 1 - - - - 1.000 - predicted gene 11557 [Source:MGI Symbol;Acc:MGI:3651826]
64. Gm12939 ENSMUSG00000081609 2 1 - - - 1.000 - - predicted gene 12939 [Source:MGI Symbol;Acc:MGI:3652092]
65. Gm5859 ENSMUSG00000073879 0 1 - - - - 1.000 - predicted pseudogene 5859 [Source:MGI Symbol;Acc:MGI:3704096]
66. Gm13642 ENSMUSG00000086846 1 1 - - - - 1.000 - predicted gene 13642 [Source:MGI Symbol;Acc:MGI:3651865]
67. Tesc ENSMUSG00000029359 6 1 - - - - - 1.000 tescalcin [Source:MGI Symbol;Acc:MGI:1930803]
68. 4930451C15Rik 4930451C15Rik 12 1 - - - - - 1.000
69. Gm25313 ENSMUSG00000095738 7 1 - - - - - 1.000 predicted gene, 25313 [Source:MGI Symbol;Acc:MGI:5455090]
70. B230323A14Rik ENSMUSG00000097623 6 1 - - - - 1.000 - RIKEN cDNA B230323A14 gene [Source:MGI Symbol;Acc:MGI:2443084]
71. Crygb ENSMUSG00000073658 1 1 - - - - - 1.000 crystallin, gamma B [Source:MGI Symbol;Acc:MGI:88522]
72. Anxa10 ENSMUSG00000031635 2 1 - - - - - 1.000 annexin A10 [Source:MGI Symbol;Acc:MGI:1347090]
73. Gm12716 ENSMUSG00000081584 9 1 - - - 1.000 - - predicted gene 12716 [Source:MGI Symbol;Acc:MGI:3650738]
74. Gm26678 ENSMUSG00000097599 6 1 - - - - - 1.000 predicted gene, 26678 [Source:MGI Symbol;Acc:MGI:5477172]
75. Gm12224 ENSMUSG00000085888 7 1 - - - - 1.000 - predicted gene 12224 [Source:MGI Symbol;Acc:MGI:3651369]
76. Arhgap40 ENSMUSG00000074625 0 1 - - - - 1.000 - Rho GTPase activating protein 40 [Source:MGI Symbol;Acc:MGI:3649852]
77. Dnah5 ENSMUSG00000022262 9 1 - - - - 1.000 - dynein, axonemal, heavy chain 5 [Source:MGI Symbol;Acc:MGI:107718]
78. Sun3 ENSMUSG00000040985 3 1 - - - - 1.000 - Sad1 and UNC84 domain containing 3 [Source:MGI Symbol;Acc:MGI:3041199]
79. Ccdc67 3 1 - - - - 1.000 - coiled-coil domain containing 67, transcript variant X8
80. Gnat3 ENSMUSG00000028777 6 1 - - - - 1.000 - guanine nucleotide binding protein, alpha transducing 3 [Source:MGI Symbol;Acc:MGI:3588268]
81. Csta Csta 0 1 - - - - 1.000 -
82. A530088E08Rik 2 1 - - - - - 1.000 RIKEN cDNA A530088E08 gene
83. 1700034J05Rik ENSMUSG00000040163 1 1 - - - - - 1.000 RIKEN cDNA 1700034J05 gene [Source:MGI Symbol;Acc:MGI:1920594]
84. Oc90 ENSMUSG00000015001 0 1 - - - - 1.000 - otoconin 90 [Source:MGI Symbol;Acc:MGI:1313269]
85. Gm27027 ENSMUSG00000098004 1 1 - - - - 1.000 - predicted gene, 27027 [Source:MGI Symbol;Acc:MGI:5504142]
86. D6Ertd474e ENSMUSG00000072679 0 1 - - - - 1.000 - DNA segment, Chr 6, ERATO Doi 474, expressed [Source:MGI Symbol;Acc:MGI:1196315]
87. Mir1949 ENSMUSG00000088059, ENSMUSG00000105743 2 1 - - - - - 1.000 microRNA 1949 [Source:MGI Symbol;Acc:MGI:3837022]
88. Gm10566 ENSMUSG00000073737 1 1 - - - - 1.000 - predicted gene 10566 [Source:MGI Symbol;Acc:MGI:3642220]
89. AV039307 ENSMUSG00000087519 4 1 - - - - 1.000 - expressed sequence AV039307 [Source:MGI Symbol;Acc:MGI:2139243]
90. Gm6434 ENSMUSG00000091233 4 1 - - - - - 1.000 predicted gene 6434 [Source:MGI Symbol;Acc:MGI:3648424]
91. Olfr99 ENSMUSG00000061972 1 1 - - - - - 1.000 olfactory receptor 99 [Source:MGI Symbol;Acc:MGI:2177482]
92. Gm13344 ENSMUSG00000087103 10 1 - - - 1.000 - - predicted gene 13344 [Source:MGI Symbol;Acc:MGI:3649239]
93. Gm22304 ENSMUSG00000064622 0 1 - - - - 1.000 - predicted gene, 22304 [Source:MGI Symbol;Acc:MGI:5452081]
94. Gm13216 ENSMUSG00000082013 3 1 - - - 1.000 - - predicted gene 13216 [Source:MGI Symbol;Acc:MGI:3651709]
95. Trhr ENSMUSG00000038760 1 1 - - - - 1.000 - thyrotropin releasing hormone receptor [Source:MGI Symbol;Acc:MGI:98824]
96. Mettl7b ENSMUSG00000025347 1 1 - - - - - 1.000 methyltransferase like 7B [Source:MGI Symbol;Acc:MGI:1918914]
97. Ighv1-83 ENSMUSG00000105757 1 1 - - - - 1.000 - immunoglobulin heavy variable 1-83 [Source:MGI Symbol;Acc:MGI:3648939]
98. Gm13204 ENSMUSG00000082860 4 1 - - - 1.000 - - predicted gene 13204 [Source:MGI Symbol;Acc:MGI:3651444]
99. Olfr1384 ENSMUSG00000044170 1 1 - - - - 1.000 - olfactory receptor 1384 [Source:MGI Symbol;Acc:MGI:3031218]
100. Gm10558 ENSMUSG00000073656 1 1 - - - - 1.000 - predicted gene 10558 [Source:MGI Symbol;Acc:MGI:3642906]

There are 263 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA