Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Scg3

Gene Name Gene ID Reads Annotation
Scg3 ENSMUSG00000032181 445 secretogranin III [Source:MGI Symbol;Acc:MGI:103032]







Genes with expression patterns similar to Scg3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scg3 ENSMUSG00000032181 445 6 1.000 1.000 1.000 1.000 1.000 1.000 secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
2. Rtn1 ENSMUSG00000021087 2547 4.523 0.712 0.758 0.744 0.705 0.848 0.756 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
3. Dcx ENSMUSG00000031285 1733 3.98 0.734 0.791 0.828 - 0.850 0.777 doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
4. Elavl4 ENSMUSG00000028546 6084 3.975 - 0.806 0.824 0.794 0.783 0.768 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
5. Tagln3 ENSMUSG00000022658 6054 3.909 - 0.730 0.823 0.800 0.767 0.789 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
6. Tubb2b ENSMUSG00000045136 41060 3.823 0.728 - 0.810 0.794 0.770 0.721 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
7. Elavl3 ENSMUSG00000003410 2830 3.291 0.800 - 0.886 0.857 0.748 - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
8. Nhlh1 ENSMUSG00000051251 2017 3.263 0.771 0.835 0.877 0.780 - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
9. Cdk5r1 ENSMUSG00000048895 2376 3.259 - - 0.864 0.747 0.851 0.797 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
10. Tubb3 ENSMUSG00000062380 9211 3.23 0.824 0.813 - 0.832 0.761 - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
11. Ncan ENSMUSG00000002341 521 3.217 0.794 - 0.873 0.739 0.811 - neurocan [Source:MGI Symbol;Acc:MGI:104694]
12. Rufy3 ENSMUSG00000029291 695 3.18 0.722 - 0.856 - 0.859 0.743 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
13. Fez1 ENSMUSG00000032118 2537 3.151 - - 0.865 0.770 0.777 0.739 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
14. Map2 ENSMUSG00000015222 2576 3.123 0.822 0.793 0.746 0.762 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
15. Stmn3 ENSMUSG00000027581 1327 3.104 - - 0.850 0.701 0.831 0.722 stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
16. Trp53i11 ENSMUSG00000068735 15944 3.101 0.808 0.750 0.812 0.731 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
17. Nhlh2 ENSMUSG00000048540 1310 3.071 0.836 0.771 0.719 0.745 - - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
18. Stmn2 ENSMUSG00000027500 6200 3.066 - - 0.758 0.706 0.800 0.802 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
19. Nefl ENSMUSG00000022055 4031 3.061 0.741 - 0.790 - 0.771 0.759 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
20. Myt1 ENSMUSG00000010505 661 3.05 - - 0.867 0.732 0.729 0.722 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
21. Spock2 ENSMUSG00000058297 1096 3.048 - 0.706 0.799 - 0.813 0.730 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
22. Btbd17 ENSMUSG00000000202 565 3.043 0.893 - 0.741 - 0.708 0.701 BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
23. Nefm ENSMUSG00000022054 2534 3.036 - 0.718 0.780 - 0.806 0.732 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
24. Elavl2 ENSMUSG00000008489 2109 3.036 0.815 0.756 - 0.716 - 0.749 ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
25. Mllt11 ENSMUSG00000053192 1776 3.008 - 0.711 0.806 - 0.775 0.716 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
26. Neurod4 ENSMUSG00000048015 764 3.001 0.775 0.711 - 0.748 - 0.767 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
27. Gng3 ENSMUSG00000071658 2104 2.934 0.702 - 0.792 0.737 0.703 - guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
28. Cadps ENSMUSG00000054423 870 2.869 0.735 - - 0.709 0.705 0.720 Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
29. Fgfbp3 ENSMUSG00000047632 2036 2.366 - - 0.847 - 0.778 0.741 fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
30. Rhbdl3 ENSMUSG00000017692 783 2.354 0.792 0.725 0.837 - - - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
31. Soga3 ENSMUSG00000038916 3972 2.333 - - 0.781 0.781 0.771 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
32. St18 ENSMUSG00000033740 408 2.332 0.790 - 0.835 0.707 - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
33. Mapt ENSMUSG00000018411 1834 2.325 - - 0.793 - 0.765 0.767 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
34. Dpysl5 ENSMUSG00000029168 2096 2.302 0.738 - 0.771 - 0.793 - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
35. Ina ENSMUSG00000034336 3835 2.294 0.710 - 0.841 - 0.743 - internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
36. Uchl1 ENSMUSG00000029223 2803 2.278 - 0.720 0.782 - 0.776 - ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
37. Hecw1 ENSMUSG00000021301 236 2.276 - - 0.736 - 0.772 0.768 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2444115]
38. Syn1 ENSMUSG00000037217 289 2.271 - - 0.858 - 0.709 0.704 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
39. Crmp1 ENSMUSG00000029121 3165 2.27 - - 0.781 - 0.769 0.720 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
40. Srgap3 ENSMUSG00000030257 2941 2.257 0.781 0.711 0.765 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
41. Mapk8ip2 ENSMUSG00000022619 910 2.213 - - 0.705 0.703 0.805 - mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
42. Gm3764 ENSMUSG00000097156 474 1.624 - - 0.837 0.787 - - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
43. Scrt1 ENSMUSG00000048385 155 1.618 - - 0.846 - 0.772 - scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
44. Tuba1a ENSMUSG00000072235 51129 1.615 - - 0.826 0.789 - - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
45. Map1b ENSMUSG00000052727 28977 1.607 - - 0.798 0.809 - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
46. Actl6b ENSMUSG00000029712 203 1.604 - - 0.785 - 0.819 - actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
47. Kcnq2 ENSMUSG00000016346 94 1.599 - - 0.873 - 0.726 - potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
48. L1cam ENSMUSG00000031391 813 1.595 - - 0.805 - 0.790 - L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]
49. Trim67 ENSMUSG00000036913 70 1.587 - - 0.810 - 0.777 - tripartite motif-containing 67 [Source:MGI Symbol;Acc:MGI:3045323]
50. Ap3b2 ENSMUSG00000062444 565 1.585 - - 0.800 - 0.785 - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
51. Nmnat2 ENSMUSG00000042751 205 1.575 - - 0.770 - 0.805 - nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
52. Kif5a ENSMUSG00000074657 425 1.57 - - 0.856 - 0.714 - kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
53. Disp2 ENSMUSG00000040035 230 1.541 - - 0.785 - 0.756 - dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
54. Ube2ql1 ENSMUSG00000052981 312 1.539 - - 0.808 - 0.731 - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:MGI Symbol;Acc:MGI:1924230]
55. Igsf21 ENSMUSG00000040972 143 1.536 - - 0.801 - 0.735 - immunoglobulin superfamily, member 21 [Source:MGI Symbol;Acc:MGI:2681842]
56. Rab3c ENSMUSG00000021700 370 1.528 - - 0.724 - - 0.804 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
57. Kif5c ENSMUSG00000026764 1283 1.522 - - - - 0.808 0.714 kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
58. Dusp8 ENSMUSG00000037887 348 1.515 - - 0.810 - 0.705 - dual specificity phosphatase 8 [Source:MGI Symbol;Acc:MGI:106626]
59. Phactr3 ENSMUSG00000027525 233 1.514 - - 0.812 - - 0.702 phosphatase and actin regulator 3 [Source:MGI Symbol;Acc:MGI:1921439]
60. Serpini1 ENSMUSG00000027834 289 1.499 - - 0.736 - 0.763 - serine (or cysteine) peptidase inhibitor, clade I, member 1 [Source:MGI Symbol;Acc:MGI:1194506]
61. Vit ENSMUSG00000024076 76 1.491 - - 0.723 - 0.768 - vitrin [Source:MGI Symbol;Acc:MGI:1921449]
62. Sptbn2 ENSMUSG00000067889 4571 1.489 - - 0.704 - 0.785 - spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
63. Neurog2 ENSMUSG00000027967 670 1.483 - - 0.736 - - 0.747 neurogenin 2 [Source:MGI Symbol;Acc:MGI:109619]
64. Grm2 ENSMUSG00000023192 147 1.48 0.707 - 0.773 - - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
65. Dll3 ENSMUSG00000003436 1086 1.479 0.755 0.724 - - - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
66. Ttyh1 ENSMUSG00000030428 279 1.469 - - 0.717 - 0.752 - tweety family member 1 [Source:MGI Symbol;Acc:MGI:1889007]
67. Dpysl3 ENSMUSG00000024501 7004 1.463 - - 0.706 - 0.757 - dihydropyrimidinase-like 3 [Source:MGI Symbol;Acc:MGI:1349762]
68. Nell2 ENSMUSG00000022454 870 1.462 0.752 - - - - 0.710 NEL-like 2 [Source:MGI Symbol;Acc:MGI:1858510]
69. Nsg2 ENSMUSG00000020297 1718 1.456 - - 0.707 - 0.749 - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
70. Sp8 ENSMUSG00000048562 219 1.456 - - - - 0.707 0.749 trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
71. Nrxn2 ENSMUSG00000033768, ENSMUSG00000107104 552 1.455 - - 0.728 - 0.727 - neurexin II [Source:MGI Symbol;Acc:MGI:1096362]
72. Rab3a ENSMUSG00000031840, ENSMUSG00000111277 252 1.455 - - 0.737 - 0.718 - RAB3A, member RAS onco family [Source:NCBI gene;Acc:19339]
73. Tmem130 ENSMUSG00000043388 34 1.453 - - - - 0.705 0.748 transmembrane protein 130 [Source:MGI Symbol;Acc:MGI:3607706]
74. Snrpn ENSMUSG00000102252 2727 1.45 0.702 - - - 0.748 - small nuclear ribonucleoprotein N [Source:MGI Symbol;Acc:MGI:98347]
75. Fam57b ENSMUSG00000058966 243 1.448 - - 0.745 - - 0.703 family with sequence similarity 57, member B [Source:MGI Symbol;Acc:MGI:1916202]
76. Insm1 ENSMUSG00000068154 480 1.447 - - - 0.741 - 0.706 insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
77. Rundc3a ENSMUSG00000006575 421 1.446 - 0.742 - - 0.704 - RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
78. Apba2 ENSMUSG00000030519 840 1.446 - 0.731 - - 0.715 - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
79. Ckb ENSMUSG00000001270 8443 1.431 - - 0.717 0.714 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
80. Onecut2 ENSMUSG00000045991 2334 1.431 - - - - 0.714 0.717 one cut domain, family member 2 [Source:MGI Symbol;Acc:MGI:1891408]
81. Sncg ENSMUSG00000023064 1702 1.425 - - - - 0.722 0.703 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
82. Sox2ot ENSMUSG00000105265 475 0.9 - - 0.900 - - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
83. A930011O12Rik A930011O12Rik 359 0.887 - - 0.887 - - -
84. Rbfox3 ENSMUSG00000025576 384 0.864 - - 0.864 - - - RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
85. Rps6kl1 ENSMUSG00000019235 20 0.864 - - 0.864 - - - ribosomal protein S6 kinase-like 1 [Source:MGI Symbol;Acc:MGI:2443413]
86. Cpne6 ENSMUSG00000022212 33 0.856 - - 0.856 - - - copine VI [Source:MGI Symbol;Acc:MGI:1334445]
87. Gpm6b ENSMUSG00000031342 715 0.852 0.852 - - - - - glycoprotein m6b [Source:MGI Symbol;Acc:MGI:107672]
88. Mgat5b ENSMUSG00000043857 152 0.825 - - 0.825 - - - mannoside acetylglucosaminyltransferase 5, isoenzyme B [Source:MGI Symbol;Acc:MGI:3606200]
89. Rbfox1 ENSMUSG00000008658 758 0.825 - - - - - 0.825 RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:MGI Symbol;Acc:MGI:1926224]
90. Gprin1 ENSMUSG00000069227 1013 0.824 - - 0.824 - - - G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
91. Grem2 ENSMUSG00000050069 357 0.807 0.807 - - - - - gremlin 2, DAN family BMP antagonist [Source:MGI Symbol;Acc:MGI:1344367]
92. Slco5a1 ENSMUSG00000025938 586 0.807 - - - 0.807 - - solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
93. Ebf1 ENSMUSG00000057098 3112 0.802 - - - 0.802 - - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
94. Uts2b ENSMUSG00000056423 294 0.799 - - 0.799 - - - urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
95. Mycl ENSMUSG00000028654 904 0.798 - - 0.798 - - - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
96. Tmem169 ENSMUSG00000026188 68 0.792 - - 0.792 - - - transmembrane protein 169 [Source:MGI Symbol;Acc:MGI:2442781]
97. Rab6b ENSMUSG00000032549 1005 0.79 - - - - 0.790 - RAB6B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:107283]
98. D930028M14Rik ENSMUSG00000074274 452 0.79 - 0.790 - - - - RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
99. Npdc1 ENSMUSG00000015094 564 0.786 - - - - - 0.786 neural proliferation, differentiation and control 1 [Source:MGI Symbol;Acc:MGI:1099802]
100. Smim18 ENSMUSG00000094500 31 0.785 - - - - - 0.785 small integral membrane protein 18 [Source:MGI Symbol;Acc:MGI:1919882]

There are 118 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA