Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scarna2

Gene Name Gene ID Reads Annotation
Scarna2 ENSMUSG00000088185 6 small Cajal body-specific RNA 2 [Source:MGI Symbol;Acc:MGI:3819484]







Genes with expression patterns similar to Scarna2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scarna2 ENSMUSG00000088185 6 5 1.000 1.000 1.000 - 1.000 1.000 small Cajal body-specific RNA 2 [Source:MGI Symbol;Acc:MGI:3819484]
2. Cd274 ENSMUSG00000016496 7 1.728 0.728 - - - - 1.000 CD274 antigen [Source:MGI Symbol;Acc:MGI:1926446]
3. Lrrc38 ENSMUSG00000028584, ENSMUSG00000097351 7 1.714 - - 0.714 - - 1.000 leucine rich repeat containing 38 [Source:MGI Symbol;Acc:MGI:2442845]
4. Gm16027 ENSMUSG00000090041 1 1 1.000 - - - - - predicted gene 16027 [Source:MGI Symbol;Acc:MGI:3801732]
5. Tnr ENSMUSG00000015829 1 1 1.000 - - - - - tenascin R [Source:MGI Symbol;Acc:MGI:99516]
6. 5730420D15Rik ENSMUSG00000097766 1 1 - - - - 1.000 - RIKEN cDNA 5730420D15 gene [Source:MGI Symbol;Acc:MGI:1917773]
7. Gm22642 ENSMUSG00000093093 1 1 - - - - - 1.000 predicted gene, 22642 [Source:MGI Symbol;Acc:MGI:5452419]
8. Proc ENSMUSG00000024386 3 1 1.000 - - - - - protein C [Source:MGI Symbol;Acc:MGI:97771]
9. Sash3 ENSMUSG00000031101 38 1 - - - - - 1.000 SAM and SH3 domain containing 3 [Source:MGI Symbol;Acc:MGI:1921381]
10. Gm7869 ENSMUSG00000081668 2 1 1.000 - - - - - predicted gene 7869 [Source:MGI Symbol;Acc:MGI:3644630]
11. Gm16111 ENSMUSG00000090008 2 1 - - - - 1.000 - predicted gene 16111 [Source:MGI Symbol;Acc:MGI:3801919]
12. Lpin3 ENSMUSG00000027412 6 1 1.000 - - - - - lipin 3 [Source:MGI Symbol;Acc:MGI:1891342]
13. Gdf5 ENSMUSG00000038259 3 1 - - - - 1.000 - growth differentiation factor 5 [Source:MGI Symbol;Acc:MGI:95688]
14. Gm12292 ENSMUSG00000086490 7 1 - - - - 1.000 - predicted gene 12292 [Source:MGI Symbol;Acc:MGI:3649414]
15. Gm15359 Gm15359 4 1 1.000 - - - - -
16. Gm22043 ENSMUSG00000064927 1 1 1.000 - - - - - predicted gene, 22043 [Source:MGI Symbol;Acc:MGI:5451820]
17. Gm20413 Gm20413 1 1 - - - - - 1.000
18. Fmo4 ENSMUSG00000026692 1 1 - - - - 1.000 - flavin containing monooxygenase 4 [Source:MGI Symbol;Acc:MGI:2429497]
19. A430110L20Rik ENSMUSG00000054135 9 1 1.000 - - - - - RIKEN cDNA A430110L20 gene [Source:MGI Symbol;Acc:MGI:3036249]
20. Gm10614 ENSMUSG00000097773 10 1 - - - - - 1.000 predicted gene 10614 [Source:MGI Symbol;Acc:MGI:3642104]
21. Colec11 ENSMUSG00000036655 47 1 1.000 - - - - - collectin sub-family member 11 [Source:MGI Symbol;Acc:MGI:1918943]
22. Nyx ENSMUSG00000051228 1 1 - - - - 1.000 - nyctalopin [Source:MGI Symbol;Acc:MGI:2448607]
23. Rab42 ENSMUSG00000089687 6 1 1.000 - - - - - RAB42, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2441753]
24. Galntl5 ENSMUSG00000028938 2 1 - - - - 1.000 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 [Source:MGI Symbol;Acc:MGI:1915159]
25. RP23-308M1.2 RP23-308M1.2 2 1 1.000 - - - - -
26. Trpm3 ENSMUSG00000052387 4 1 1.000 - - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:MGI Symbol;Acc:MGI:2443101]
27. Gm17028 ENSMUSG00000090638 1 1 1.000 - - - - - predicted gene 17028 [Source:MGI Symbol;Acc:MGI:4937855]
28. Gm15489 ENSMUSG00000086942 3 1 - - - - 1.000 - predicted gene 15489 [Source:MGI Symbol;Acc:MGI:3705099]
29. A930038B10Rik ENSMUSG00000097310 3 1 - - - - - 1.000 RIKEN cDNA A930038B10 gene [Source:MGI Symbol;Acc:MGI:2443813]
30. Gm20535 ENSMUSG00000092373 1 1 - - - - - 1.000 predicted gene 20535 [Source:MGI Symbol;Acc:MGI:5142000]
31. Sult3a1 ENSMUSG00000069668 1 1 - - - - 1.000 - sulfotransferase family 3A, member 1 [Source:MGI Symbol;Acc:MGI:1931469]
32. Gm15504 ENSMUSG00000082954 1 1 - - - - 1.000 - predicted gene 15504 [Source:MGI Symbol;Acc:MGI:3782951]
33. Izumo1 ENSMUSG00000064158 11 1 - - - - - 1.000 izumo sperm-egg fusion 1 [Source:MGI Symbol;Acc:MGI:1920706]
34. Gm15340 ENSMUSG00000085903 1 1 - - - - - 1.000 predicted gene 15340 [Source:MGI Symbol;Acc:MGI:3705158]
35. 9930022D16Rik ENSMUSG00000045065 2 1 1.000 - - - - - RIKEN cDNA 9930022D16 gene [Source:MGI Symbol;Acc:MGI:2444178]
36. 1700122E12Rik ENSMUSG00000087685 6 1 1.000 - - - - - RIKEN cDNA 1700122E12 gene [Source:MGI Symbol;Acc:MGI:1920869]
37. Gm14530 ENSMUSG00000081735 6 1 - - - - 1.000 - predicted gene 14530 [Source:MGI Symbol;Acc:MGI:3705621]
38. Ppp1r14d ENSMUSG00000027317 1 1 - - - - - 1.000 protein phosphatase 1, regulatory inhibitor subunit 14D [Source:MGI Symbol;Acc:MGI:1919362]
39. Defb48 ENSMUSG00000075574 1 1 - - - - 1.000 - defensin beta 48 [Source:MGI Symbol;Acc:MGI:3646223]
40. Adam1a ENSMUSG00000072647 1 1 1.000 - - - - - a disintegrin and metallopeptidase domain 1a [Source:MGI Symbol;Acc:MGI:2429504]
41. Gm9903 ENSMUSG00000097271 3 1 - - - - 1.000 - predicted gene 9903 [Source:MGI Symbol;Acc:MGI:3646113]
42. BC046251 ENSMUSG00000086662 5 1 - - - - 1.000 - cDNA sequence BC046251 [Source:MGI Symbol;Acc:MGI:3039598]
43. Cyp4a28-ps ENSMUSG00000081823 5 1 - - - - 1.000 - cytochrome P450, family 4, subfamily a, polypeptide 28, pseudogene [Source:MGI Symbol;Acc:MGI:1932405]
44. Ern2 ENSMUSG00000030866 6 1 1.000 - - - - - endoplasmic reticulum (ER) to nucleus signalling 2 [Source:MGI Symbol;Acc:MGI:1349436]
45. Gm10154 ENSMUSG00000066116 7 1 - - - - 1.000 - predicted gene 10154 [Source:MGI Symbol;Acc:MGI:3642271]
46. 1700022K14Rik 1700022K14Rik 1 1 - - - - - 1.000
47. Rps15a-ps4 ENSMUSG00000083757 11 1 - - - - - 1.000 ribosomal protein S15A, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3652187]
48. Muc15 ENSMUSG00000050808 1 1 - - - - - 1.000 mucin 15 [Source:MGI Symbol;Acc:MGI:2442110]
49. Gm11703 ENSMUSG00000083394 25 1 - - - - 1.000 - predicted gene 11703 [Source:MGI Symbol;Acc:MGI:3649808]
50. Gm25197 ENSMUSG00000095943 3 1 1.000 - - - - - predicted gene, 25197 [Source:MGI Symbol;Acc:MGI:5454974]
51. Gsto2 ENSMUSG00000025069 15 1 1.000 - - - - - glutathione S-transferase omega 2 [Source:MGI Symbol;Acc:MGI:1915464]
52. B4galnt2 ENSMUSG00000013418 1 1 1.000 - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 2 [Source:MGI Symbol;Acc:MGI:1342058]
53. Ip6k3 ENSMUSG00000024210 3 1 - - - - 1.000 - inositol hexaphosphate kinase 3 [Source:MGI Symbol;Acc:MGI:3045325]
54. Gm20475 ENSMUSG00000092559 2 1 - - - - - 1.000 predicted gene 20475 [Source:MGI Symbol;Acc:MGI:5141940]
55. 4930443B20Rik 4930443B20Rik 73 1 - - - - - 1.000
56. Gm26603 ENSMUSG00000097857 20 1 - - - - - 1.000 predicted gene, 26603 [Source:MGI Symbol;Acc:MGI:5477097]
57. Qrich2 ENSMUSG00000070331 6 1 - - - - - 1.000 glutamine rich 2 [Source:MGI Symbol;Acc:MGI:2684912]
58. Rbpjl ENSMUSG00000017007 6 1 - - - - - 1.000 recombination signal binding protein for immunoglobulin kappa J region-like [Source:MGI Symbol;Acc:MGI:1196616]
59. Gm15478 ENSMUSG00000085363 3 1 - - - - - 1.000 predicted gene 15478 [Source:MGI Symbol;Acc:MGI:3705145]
60. Gm22027 ENSMUSG00000084686 9 1 1.000 - - - - - predicted gene, 22027 [Source:MGI Symbol;Acc:MGI:5451804]
61. Emx1 ENSMUSG00000033726 16 1 1.000 - - - - - empty spiracles homeobox 1 [Source:MGI Symbol;Acc:MGI:95387]
62. Gm15422 ENSMUSG00000082738 1 1 - - - - 1.000 - predicted gene 15422 [Source:MGI Symbol;Acc:MGI:3707362]
63. Gm14927 ENSMUSG00000081546 1 1 1.000 - - - - - predicted gene 14927 [Source:MGI Symbol;Acc:MGI:3708103]
64. Thy1 ENSMUSG00000032011 37 1 1.000 - - - - - thymus cell antigen 1, theta [Source:MGI Symbol;Acc:MGI:98747]
65. Gm5900 ENSMUSG00000094685 2 1 - - - - 1.000 - predicted pseudogene 5900 [Source:MGI Symbol;Acc:MGI:3643907]
66. Tchhl1 ENSMUSG00000027908 1 1 1.000 - - - - - trichohyalin-like 1 [Source:MGI Symbol;Acc:MGI:1918575]
67. 4930444M15Rik ENSMUSG00000097172 7 1 1.000 - - - - - RIKEN cDNA 4930444M15 gene [Source:MGI Symbol;Acc:MGI:1923039]
68. Zkscan7 ENSMUSG00000063488, ENSMUSG00000111063 2 1 - - - - - 1.000 zinc finger with KRAB and SCAN domains 7 [Source:MGI Symbol;Acc:MGI:3040678]
69. Gsx2 ENSMUSG00000035946 5 1 - - - - 1.000 - GS homeobox 2 [Source:MGI Symbol;Acc:MGI:95843]
70. Gm5449 ENSMUSG00000063166 1 1 - - - - - 1.000 predicted pseudogene 5449 [Source:MGI Symbol;Acc:MGI:3643792]
71. Gm20627 ENSMUSG00000093507 9 1 - - - - - 1.000 predicted gene 20627 [Source:MGI Symbol;Acc:MGI:5313074]
72. Cdx1 ENSMUSG00000024619 3 1 1.000 - - - - - caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]
73. Aph1c ENSMUSG00000053040 15 1 1.000 - - - - - aph1 homolog C, gamma secretase subunit [Source:MGI Symbol;Acc:MGI:1915568]
74. Tpt1-ps6 ENSMUSG00000084284 6 1 - - - - 1.000 - tumor protein, translationally-controlled, pseudogene 6 [Source:MGI Symbol;Acc:MGI:2665000]
75. Gm26445 ENSMUSG00000093816 1 1 - - - - - 1.000 predicted gene, 26445 [Source:MGI Symbol;Acc:MGI:5456222]
76. Snora41 ENSMUSG00000064602 5 1 - - - - 1.000 - small nucleolar RNA, H/ACA box 41 [Source:MGI Symbol;Acc:MGI:3819505]
77. Defb25 ENSMUSG00000074678 5 1 1.000 - - - - - defensin beta 25 [Source:MGI Symbol;Acc:MGI:3651158]
78. Gm26783 ENSMUSG00000097435 1 1 1.000 - - - - - predicted gene, 26783 [Source:MGI Symbol;Acc:MGI:5477277]
79. Gm21464 Gm21464 1 1 1.000 - - - - -
80. Gm20539 ENSMUSG00000092353 1 1 1.000 - - - - - predicted gene 20539 [Source:MGI Symbol;Acc:MGI:5142004]
81. Dusp15 ENSMUSG00000042662 21 1 1.000 - - - - - dual specificity phosphatase-like 15 [Source:MGI Symbol;Acc:MGI:1934928]
82. Tigd4 ENSMUSG00000047819 2 1 - - - - - 1.000 tigger transposable element derived 4 [Source:MGI Symbol;Acc:MGI:2685264]
83. 4930594C11Rik ENSMUSG00000103948 5 1 1.000 - - - - - RIKEN cDNA 4930594C11 gene [Source:MGI Symbol;Acc:MGI:1924883]
84. Fcnb ENSMUSG00000026835 2 1 - - - - - 1.000 ficolin B [Source:MGI Symbol;Acc:MGI:1341158]
85. Cabyr ENSMUSG00000024430 7 1 1.000 - - - - - calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) [Source:MGI Symbol;Acc:MGI:1918382]
86. Gm4922 ENSMUSG00000044624 1 1 - - - - - 1.000 predicted gene 4922 [Source:MGI Symbol;Acc:MGI:3644318]
87. Gm12204 ENSMUSG00000086493 2 1 1.000 - - - - - predicted gene 12204 [Source:MGI Symbol;Acc:MGI:3650262]
88. Il24 ENSMUSG00000026420 1 1 1.000 - - - - - interleukin 24 [Source:MGI Symbol;Acc:MGI:2135548]
89. Gm14310 Gm14310 1 1 1.000 - - - - -
90. Ifi27l2a ENSMUSG00000079017 5 1 1.000 - - - - - interferon, alpha-inducible protein 27 like 2A [Source:MGI Symbol;Acc:MGI:1924183]
91. P2ry13 ENSMUSG00000036362 46 1 1.000 - - - - - purinergic receptor P2Y, G-protein coupled 13 [Source:MGI Symbol;Acc:MGI:1921441]
92. Gm17137 ENSMUSG00000090559 1 1 1.000 - - - - - predicted gene 17137 [Source:MGI Symbol;Acc:MGI:4937964]
93. Crct1 ENSMUSG00000027913 9 1 1.000 - - - - - cysteine-rich C-terminal 1 [Source:MGI Symbol;Acc:MGI:1921425]
94. Gja6 ENSMUSG00000055691 36 1 1.000 - - - - - gap junction protein, alpha 6 [Source:MGI Symbol;Acc:MGI:95717]
95. 4933406C10Rik ENSMUSG00000097494 9 1 1.000 - - - - - RIKEN cDNA 4933406C10 gene [Source:MGI Symbol;Acc:MGI:1921326]
96. C1qtnf9 ENSMUSG00000071347 6 1 1.000 - - - - - C1q and tumor necrosis factor related protein 9 [Source:MGI Symbol;Acc:MGI:3045252]
97. Uox ENSMUSG00000028186 1 1 1.000 - - - - - urate oxidase [Source:MGI Symbol;Acc:MGI:98907]
98. Il1b ENSMUSG00000027398 1 1 - - - - - 1.000 interleukin 1 beta [Source:MGI Symbol;Acc:MGI:96543]
99. Spock1 ENSMUSG00000056222 1 1 - - - - 1.000 - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 [Source:MGI Symbol;Acc:MGI:105371]
100. Tubb4b-ps1 ENSMUSG00000095159 12 1 - - - - 1.000 - tubulin, beta 4B class IVB, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642800]

There are 191 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA